Spaces:
Sleeping
Sleeping
Initial deployment: Medical AI Semantic Translator
Browse files- .gitignore +10 -0
- app.py +260 -0
- requirements.txt +3 -0
.gitignore
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# Local development files
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*.pyc
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__pycache__/
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.env
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*.log
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.DS_Store
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# Never commit API keys!
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*.key
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secrets.txt
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app.py
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| 1 |
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"""
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Module 1: Cross-Cultural Semantic Translator MVP
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=================================================
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A medical AI platform for translating cultural pain metaphors into structured medical ontologies.
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Deployed on Hugging Face Spaces.
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"""
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import gradio as gr
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import json
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import os
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from typing import Dict, Tuple, Optional
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# ============================================================================
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# CONFIGURATION - 从环境变量读取
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# ============================================================================
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# SECURITY: NEVER hardcode API keys in public repos
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OPENAI_API_KEY = os.getenv("OPENAI_API_KEY", "")
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# Transcription mode: Force API mode on Hugging Face (no GPU access)
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TRANSCRIPTION_MODE = "api"
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# OpenAI model for analysis
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OPENAI_MODEL = "gpt-4-turbo-preview" # Use newer model name
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# ============================================================================
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# IMPORTS AND SETUP
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# ============================================================================
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try:
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from openai import OpenAI
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client = OpenAI(api_key=OPENAI_API_KEY) if OPENAI_API_KEY else None
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except ImportError:
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print("ERROR: OpenAI library not installed.")
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client = None
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# ============================================================================
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# SYSTEM PROMPT FOR LLM
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# ============================================================================
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MEDICAL_ANTHROPOLOGIST_PROMPT = """You are an expert Medical Anthropologist. Your goal is to translate cultural pain metaphors into structured medical ontologies. Do NOT act as a doctor making a final diagnosis. Analyze the patient's transcript and output a strict JSON object with these exact keys: 'literal_translation', 'metaphor_mapping', 'mcgill_pain_ontology', 'psychological_and_stoicism_flags', 'physician_action_note'. Make sure to include English and original language in metaphor_mapping for reference."""
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# ============================================================================
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# AUDIO TRANSCRIPTION FUNCTION
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# ============================================================================
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def transcribe_audio(audio_path: Optional[str]) -> Tuple[str, str]:
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"""
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Transcribe audio using OpenAI Whisper API.
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"""
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if audio_path is None:
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return "", "⚠️ No audio recorded. Please record audio first."
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if client is None:
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return "", "❌ OpenAI client not initialized. API key missing."
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try:
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with open(audio_path, "rb") as audio_file:
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transcript = client.audio.transcriptions.create(
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model="whisper-1",
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file=audio_file,
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response_format="text"
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)
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transcription = transcript.strip()
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status = f"✓ Transcribed via OpenAI Whisper API"
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if not transcription:
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return "", "⚠️ Transcription is empty. Please check your audio quality."
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return transcription, status
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except Exception as e:
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error_msg = f"❌ Transcription error: {str(e)}"
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print(error_msg)
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return "", error_msg
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# ============================================================================
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# LLM ANALYSIS FUNCTION
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# ============================================================================
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def analyze_with_llm(transcription: str) -> Tuple[str, str]:
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"""
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Send transcription to OpenAI API for medical anthropological analysis.
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"""
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if not transcription or transcription.strip() == "":
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return "<div style='padding: 20px; color: #ffc107;'>⚠️ No transcription to analyze.</div>", "{}"
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if client is None:
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return "<div style='padding: 20px; color: #ff6b6b;'>❌ OpenAI client not initialized. Please set OPENAI_API_KEY in Space secrets.</div>", "{}"
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try:
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response = client.chat.completions.create(
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model=OPENAI_MODEL,
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messages=[
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{"role": "system", "content": MEDICAL_ANTHROPOLOGIST_PROMPT},
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{"role": "user", "content": f"Patient transcript:\n\n{transcription}"}
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],
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response_format={"type": "json_object"},
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temperature=0.7
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)
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json_text = response.choices[0].message.content
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if not json_text or json_text.strip() == "":
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return "<div style='padding: 20px; color: #ff6b6b;'>❌ Empty response from LLM</div>", "{}"
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try:
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parsed_json = json.loads(json_text)
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except json.JSONDecodeError as je:
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error_html = f"""
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<div style='padding: 20px; background-color: #f8d7da; border-left: 5px solid #dc3545; border-radius: 8px;'>
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<h3 style='color: #721c24;'>⚠️ JSON Parse Error</h3>
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<p style='color: #721c24;'>{str(je)}</p>
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</div>
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"""
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return error_html, json_text
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formatted_output = format_json_for_display(parsed_json)
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return formatted_output, json_text
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except Exception as e:
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import traceback
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error_details = traceback.format_exc()
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error_html = f"""
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<div style='padding: 20px; background-color: #f8d7da; border-left: 5px solid #dc3545; border-radius: 8px;'>
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<h3 style='color: #721c24;'>❌ LLM Analysis Error</h3>
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<pre style='color: #721c24; font-size: 12px; overflow-x: auto;'>{error_details}</pre>
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</div>
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"""
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return error_html, "{}"
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# ============================================================================
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# JSON FORMATTING FOR DISPLAY
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# ============================================================================
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def format_json_for_display(data: Dict) -> str:
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"""Format the JSON output into a human-readable medical report."""
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# [保留你原来的 format_json_for_display 函数的完整代码]
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# 这里为了简洁省略,实际部署时复制完整函数
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html_parts = ['''
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<div style="font-family: 'Segoe UI', Arial, sans-serif; padding: 30px; background: linear-gradient(135deg, #667eea 0%, #764ba2 100%); border-radius: 15px; color: #ffffff; box-shadow: 0 10px 25px rgba(0,0,0,0.2); line-height: 1.8;">
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''']
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# [完整的格式化逻辑...]
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html_parts.append('</div>')
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return ''.join(html_parts)
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# ============================================================================
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# MAIN PROCESSING FUNCTION
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# ============================================================================
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def process_patient_audio(audio) -> Tuple[str, str, str]:
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"""Main processing pipeline"""
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try:
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transcription, trans_status = transcribe_audio(audio)
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if "Error" in trans_status or not transcription.strip():
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return trans_status, transcription, "<div style='padding: 20px; color: #ff6b6b;'>⚠️ Cannot analyze without transcription.</div>"
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formatted_html, json_output = analyze_with_llm(transcription)
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if "Error" in formatted_html:
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return "❌ Analysis failed", transcription, formatted_html
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return "✅ Analysis complete", transcription, formatted_html
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except Exception as e:
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import traceback
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error_details = traceback.format_exc()
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error_html = f"""
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<div style='padding: 20px; background-color: #f8d7da; border-left: 5px solid #dc3545; border-radius: 8px;'>
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| 174 |
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<h3 style='color: #721c24;'>❌ Unexpected Error</h3>
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| 175 |
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<pre style='color: #721c24; font-size: 12px; overflow-x: auto;'>{error_details}</pre>
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| 176 |
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</div>
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"""
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return "❌ Processing error", "Error during processing", error_html
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+
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# ============================================================================
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# GRADIO UI SETUP
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| 182 |
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# ============================================================================
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def create_ui():
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"""Create the Gradio interface"""
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with gr.Blocks(title="Medical AI Semantic Translator", theme=gr.themes.Soft()) as app:
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gr.Markdown(
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"""
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| 190 |
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# 🏥 Module 1: Cross-Cultural Semantic Translator
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### Translating Cultural Pain Metaphors into Medical Ontologies
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**Instructions:** Record your audio description of pain symptoms, then click Analyze.
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⚠️ **Note:** This demo uses OpenAI's API. The Space owner must configure API keys.
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"""
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)
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+
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status_output = gr.Textbox(label="Status", interactive=False, lines=1)
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with gr.Row():
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with gr.Column(scale=1):
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gr.Markdown("### 🎤 Audio Input")
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audio_input = gr.Audio(
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sources=["microphone"],
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type="filepath",
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label="Record Your Pain Description"
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)
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submit_btn = gr.Button("🔍 Analyze", variant="primary", size="lg")
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+
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gr.Markdown("### 📄 Transcription")
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transcription_output = gr.Textbox(
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label="Whisper Transcription Output",
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interactive=False,
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lines=8
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)
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+
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with gr.Column(scale=1):
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gr.Markdown("### 🤖 AI Medical Anthropologist Analysis")
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analysis_output = gr.HTML(
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label="Structured Medical Ontology",
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value='<div style="padding: 20px; text-align: center; color: #6c757d;">Analysis results will appear here...</div>'
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)
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| 224 |
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gr.Markdown(
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f"""
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---
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**Configuration:** Transcription: `API` | LLM Model: `{OPENAI_MODEL}`
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+
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**Deployed on:** [Hugging Face Spaces](https://huggingface.co/spaces/DIrtyCha/Module1demo)
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"""
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)
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submit_btn.click(
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fn=process_patient_audio,
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inputs=[audio_input],
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outputs=[status_output, transcription_output, analysis_output]
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)
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| 239 |
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return app
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# ============================================================================
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# MAIN ENTRY POINT
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# ============================================================================
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if __name__ == "__main__":
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print("=" * 70)
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| 248 |
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print("🚀 Medical AI Semantic Translator MVP - Hugging Face Spaces")
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print("=" * 70)
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+
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if not OPENAI_API_KEY:
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print("⚠️ WARNING: OPENAI_API_KEY not set in Space secrets!")
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| 253 |
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print(" Go to: Settings → Repository Secrets → Add OPENAI_API_KEY")
|
| 254 |
+
else:
|
| 255 |
+
print("✅ OpenAI API key loaded from environment")
|
| 256 |
+
|
| 257 |
+
print("=" * 70)
|
| 258 |
+
|
| 259 |
+
app = create_ui()
|
| 260 |
+
app.launch()
|
requirements.txt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
gradio==4.44.0
|
| 2 |
+
openai>=1.0.0
|
| 3 |
+
numpy
|