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Déploiement de l'API Flask sur Hugging Face
Browse files- Dockerfile +12 -8
- README.md +19 -16
- allinone.py +440 -0
- requirements.txt +10 -5
Dockerfile
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CMD ["shiny", "run", "app.py", "--host", "0.0.0.0", "--port", "7860"]
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# Utiliser une image de base officielle de Python
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FROM python:3.9-slim
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# Définir le répertoire de travail dans le conteneur
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WORKDIR /app
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# Copier le code dans le conteneur
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COPY . /app
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# Installer les dépendances
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RUN pip install --no-cache-dir -r requirements.txt
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# Exposer le port sur lequel l'application va tourner
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EXPOSE 5000
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# Démarrer l'application
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CMD ["python", "allinone.py"]
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README.md
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title: Priority Prediction
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emoji: 🌍
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colorFrom: yellow
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colorTo: indigo
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sdk: docker
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pinned: false
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license: mit
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short_description: Ce projet implémente un modèle de machine learning pour préd
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---
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-
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2) Create a new app with `shiny create`
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3) Then run the app with `shiny run --reload`
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# Prédiction de Priorité et Services Médicaux
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Ce projet implémente un modèle de machine learning pour prédire la priorité des patients et les services médicaux recommandés en fonction de leurs caractéristiques.
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## Dépendances
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- Flask
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- flask_cors
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- pandas
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- numpy
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- scikit-learn
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- xgboost
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- lightgbm
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- imblearn
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- joblib
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- tqdm
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- tenacity
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## Installation
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1. Clonez ce repository :
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```bash
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git clone <url-du-repository>
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cd <nom-du-dossier>
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allinone.py
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import pandas as pd
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import numpy as np
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from xgboost import XGBClassifier
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from lightgbm import LGBMClassifier
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from sklearn.ensemble import RandomForestClassifier
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from sklearn.linear_model import LogisticRegression
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from sklearn.svm import SVC
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from sklearn.preprocessing import StandardScaler, LabelEncoder
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from sklearn.model_selection import StratifiedKFold
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from sklearn.metrics import classification_report, recall_score, f1_score
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from sklearn.impute import SimpleImputer
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from imblearn.over_sampling import SMOTE
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from imblearn.under_sampling import RandomUnderSampler
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from imblearn.pipeline import Pipeline
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import joblib
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from flask import Flask, request, jsonify
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from flask_cors import CORS
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import os
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import warnings
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import time
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from tqdm import tqdm
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import threading
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import logging
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from tenacity import retry, wait_fixed, stop_after_attempt
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warnings.filterwarnings('ignore', category=UserWarning)
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os.environ["LOKY_MAX_CPU_COUNT"] = "1"
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logging.basicConfig(level=logging.INFO)
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logger = logging.getLogger(__name__)
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app = Flask(__name__)
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CORS(app)
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NEW_DATA_FILE = 'new_data.csv'
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DATASET_PATH = "my_datasheet_80000.csv"
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MIN_NEW_SAMPLES_FOR_RETRAIN = 100
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# Feature sets for each task
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PRIORITY_FEATURES = [
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'SpO2', 'Frquce_Rprtr(rpm)', 'Pouls', 'PA', 'Temperature', 'SpO2_Severity', 'Tachypnea', 'Bradypnea',
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'Tachycardia', 'Bradycardia', 'Critical_Signs', 'SpO2_Temp_Ratio', 'Pouls_PA_Ratio', 'Temp_Pouls_Ratio',
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'SpO2_PA_Diff', 'SpO2_Temp_Diff', 'PA_Pouls_Diff', 'SpO2_Log', 'Temp_Squared', 'Suggested_Priority'
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]
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SERVICE_FEATURES = [
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'Age', 'Sexe', 'Enceinte', 'SpO2', 'Frquce_Rprtr(rpm)', 'Pouls', 'ECG', 'PA', 'Temperature', 'IMC',
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'Age_Category', 'Temp_Anomaly', 'PA_High', 'PA_Low', 'Pouls_SpO2_Ratio', 'PA_Temp_Ratio', 'IMC_Temp_Ratio'
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]
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priority_model = None
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service_model = None
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priority_scaler = None
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service_scaler = None
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priority_imputer = None
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service_imputer = None
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label_encoder_service = LabelEncoder()
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model_lock = threading.Lock()
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def enhanced_features(df):
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df['Tachypnea'] = df.apply(lambda row: 1 if (row['Age'] < 1 and row['Frquce_Rprtr(rpm)'] > 40) or
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(row['Age'] < 12 and row['Frquce_Rprtr(rpm)'] > 30) or
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(row['Age'] >= 12 and row['Frquce_Rprtr(rpm)'] > 20) else 0, axis=1)
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df['Bradypnea'] = df.apply(lambda row: 1 if (row['Age'] < 1 and row['Frquce_Rprtr(rpm)'] < 20) or
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(row['Age'] < 12 and row['Frquce_Rprtr(rpm)'] < 12) or
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(row['Age'] >= 12 and row['Frquce_Rprtr(rpm)'] < 8) else 0, axis=1)
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df['Tachycardia'] = df.apply(lambda row: 1 if (row['Age'] < 1 and row['Pouls'] > 160) or
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(row['Age'] < 12 and row['Pouls'] > 120) or
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(row['Age'] >= 12 and row['Pouls'] > 100) else 0, axis=1)
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df['Bradycardia'] = df.apply(lambda row: 1 if (row['Age'] < 1 and row['Pouls'] < 90) or
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(row['Age'] < 12 and row['Pouls'] < 70) or
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(row['Age'] >= 12 and row['Pouls'] < 50) else 0, axis=1)
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df['SpO2_Temp_Ratio'] = df['SpO2'] / (df['Temperature'] + 1e-6)
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df['Pouls_PA_Ratio'] = df['Pouls'] / (df['PA'] + 1e-6)
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df['Temp_Pouls_Ratio'] = df['Temperature'] / (df['Pouls'] + 1e-6)
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df['SpO2_PA_Diff'] = df['SpO2'] - df['PA'] / 10
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df['SpO2_Temp_Diff'] = df['SpO2'] - df['Temperature']
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df['PA_Pouls_Diff'] = df['PA'] - df['Pouls']
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df['IMC_Temp_Ratio'] = df['IMC'] / (df['Temperature'] + 1e-6)
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df['SpO2_Log'] = np.log1p(df['SpO2'])
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df['Temp_Squared'] = df['Temperature'] ** 2
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df['Pouls_SpO2_Ratio'] = df['Pouls'] / (df['SpO2'] + 1e-6)
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df['PA_Temp_Ratio'] = df['PA'] / (df['Temperature'] + 1e-6)
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df['Age_Category'] = pd.cut(df['Age'], bins=[0, 1, 12, 45, 65, 120], labels=[0, 1, 2, 3, 4])
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df['Temp_Anomaly'] = df['Temperature'].apply(lambda x: 1 if x < 35 or x > 38 else 0)
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df['PA_High'] = df['PA'].apply(lambda x: 1 if x > 160 else 0)
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df['PA_Low'] = df['PA'].apply(lambda x: 1 if x < 90 else 0)
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+
df['SpO2_Severity'] = pd.cut(df['SpO2'], bins=[0, 85, 90, 92, 100], labels=[3, 2, 1, 0])
|
| 90 |
+
df['Critical_Signs'] = ((df['SpO2'] < 85) | (df['Pouls'] > 150) | (df['Temperature'] > 40) |
|
| 91 |
+
(df['PA'] > 200) | (df['PA'] < 70)).astype(int)
|
| 92 |
+
return df
|
| 93 |
+
|
| 94 |
+
def compute_service_and_priority(row):
|
| 95 |
+
age = row['Age']
|
| 96 |
+
spO2 = row['SpO2']
|
| 97 |
+
frq_resp = row['Frquce_Rprtr(rpm)']
|
| 98 |
+
pouls = row['Pouls']
|
| 99 |
+
ecg = row['ECG']
|
| 100 |
+
pa = row['PA']
|
| 101 |
+
temp = row['Temperature']
|
| 102 |
+
enceinte = row['Enceinte']
|
| 103 |
+
imc = row['IMC']
|
| 104 |
+
|
| 105 |
+
if age <= 18:
|
| 106 |
+
service = 'Pédiatriques'
|
| 107 |
+
elif enceinte:
|
| 108 |
+
service = 'Gynécologie/Obstétrique'
|
| 109 |
+
elif ecg == 1 or (pouls < 50 or pouls > 110) or (frq_resp > 20):
|
| 110 |
+
service = 'Neurologie'
|
| 111 |
+
elif spO2 < 92 or frq_resp > 18 or pouls > 100 or pa < 90 or pa > 160:
|
| 112 |
+
service = 'Cardiorespiratoire'
|
| 113 |
+
elif (imc > 30 and (temp > 38 and temp <= 40) and 70 <= pouls <= 90) or \
|
| 114 |
+
(70 <= pouls <= 90 and 110 <= pa <= 130 and spO2 >= 97 and temp <= 37.5):
|
| 115 |
+
service = 'Médecine générale'
|
| 116 |
+
elif temp > 40:
|
| 117 |
+
service = 'Radiothérapie'
|
| 118 |
+
else:
|
| 119 |
+
service = 'Chirurgie'
|
| 120 |
+
|
| 121 |
+
if spO2 < 85 or temp > 40 or pouls > 150 or pa < 70 or pa > 200:
|
| 122 |
+
priorite = 1
|
| 123 |
+
elif spO2 < 88 or temp > 39.5 or pouls > 130 or pa < 80 or pa > 180 or frq_resp > 25:
|
| 124 |
+
priorite = 2
|
| 125 |
+
elif spO2 < 90 or temp > 38.5 or pouls > 110 or pa < 90 or pa > 160 or frq_resp > 20:
|
| 126 |
+
priorite = 3
|
| 127 |
+
elif spO2 < 92 or temp > 38 or pouls > 100 or pa < 100 or pa > 140 or frq_resp > 18:
|
| 128 |
+
priorite = 4
|
| 129 |
+
else:
|
| 130 |
+
priorite = 5
|
| 131 |
+
|
| 132 |
+
return service, priorite
|
| 133 |
+
|
| 134 |
+
def get_smote_strategy(y, max_samples=1000):
|
| 135 |
+
class_counts = pd.Series(y).value_counts()
|
| 136 |
+
strategy = {}
|
| 137 |
+
for cls, count in class_counts.items():
|
| 138 |
+
target = min(max_samples, max(count * 2, 100)) # Ensure reasonable class sizes
|
| 139 |
+
return strategy
|
| 140 |
+
|
| 141 |
+
def train_priority_model():
|
| 142 |
+
global priority_model, priority_scaler, priority_imputer
|
| 143 |
+
try:
|
| 144 |
+
data = pd.read_csv(DATASET_PATH)
|
| 145 |
+
data['Sexe'] = data['Sexe'].map({'Masculin': 0, 'Feminin': 1})
|
| 146 |
+
data['Enceinte'] = data['Enceinte'].astype(int)
|
| 147 |
+
data['ECG'] = data['ECG'].map({'Normal': 0, 'Anormal': 1})
|
| 148 |
+
data = enhanced_features(data)
|
| 149 |
+
data[['Suggested_Service', 'Suggested_Priority']] = data.apply(compute_service_and_priority, axis=1, result_type='expand')
|
| 150 |
+
data['Suggested_Priority'] = data['Suggested_Priority'].astype(int)
|
| 151 |
+
|
| 152 |
+
X = data[PRIORITY_FEATURES]
|
| 153 |
+
y = data['Priorite'].values - 1 # Shift to 0-based indexing
|
| 154 |
+
|
| 155 |
+
priority_imputer = SimpleImputer(strategy='median')
|
| 156 |
+
X_imputed = priority_imputer.fit_transform(X)
|
| 157 |
+
priority_scaler = StandardScaler()
|
| 158 |
+
X_scaled = priority_scaler.fit_transform(X_imputed)
|
| 159 |
+
|
| 160 |
+
models = {
|
| 161 |
+
'XGBoost': XGBClassifier(n_estimators=100, max_depth=4, learning_rate=0.05, n_jobs=-1, random_state=42),
|
| 162 |
+
'LightGBM': LGBMClassifier(n_estimators=100, max_depth=2, learning_rate=0.05, min_child_samples=5,
|
| 163 |
+
reg_alpha=0.5, reg_lambda=0.5, n_jobs=-1, random_state=42, verbose=-1),
|
| 164 |
+
'RandomForest': RandomForestClassifier(n_estimators=100, max_depth=8, n_jobs=-1, random_state=42),
|
| 165 |
+
'LogisticRegression': LogisticRegression(max_iter=1000, multi_class='multinomial', random_state=42),
|
| 166 |
+
'SVM': SVC(probability=True, random_state=42)
|
| 167 |
+
}
|
| 168 |
+
|
| 169 |
+
skf = StratifiedKFold(n_splits=5, shuffle=True, random_state=42)
|
| 170 |
+
results = {}
|
| 171 |
+
|
| 172 |
+
for name, model in models.items():
|
| 173 |
+
logger.info(f"\nEvaluating {name} for Priority...")
|
| 174 |
+
scores = {'f1': [], 'recall_p1': [], 'time': []}
|
| 175 |
+
for train_idx, test_idx in tqdm(skf.split(X_scaled, y), total=5):
|
| 176 |
+
X_train, X_test = X_scaled[train_idx], X_scaled[test_idx]
|
| 177 |
+
y_train, y_test = y[train_idx], y[test_idx]
|
| 178 |
+
|
| 179 |
+
min_class_size = pd.Series(y_train).value_counts().min()
|
| 180 |
+
k_neighbors = min(5, max(1, min_class_size - 1))
|
| 181 |
+
pipeline = Pipeline([
|
| 182 |
+
('under', RandomUnderSampler(sampling_strategy='majority', random_state=42)),
|
| 183 |
+
('over', SMOTE(sampling_strategy=get_smote_strategy(y_train), random_state=42, k_neighbors=k_neighbors))
|
| 184 |
+
])
|
| 185 |
+
X_train_res, y_train_res = pipeline.fit_resample(X_train, y_train)
|
| 186 |
+
class_sizes = pd.Series(y_train_res).value_counts().to_dict()
|
| 187 |
+
logger.info(f"{name} - Resampled class sizes: {class_sizes}")
|
| 188 |
+
|
| 189 |
+
start_time = time.time()
|
| 190 |
+
model.fit(X_train_res, y_train_res)
|
| 191 |
+
train_time = time.time() - start_time
|
| 192 |
+
|
| 193 |
+
y_pred = model.predict(X_test)
|
| 194 |
+
scores['f1'].append(f1_score(y_test, y_pred, average='macro'))
|
| 195 |
+
scores['recall_p1'].append(recall_score(y_test, y_pred, labels=[0], average=None, zero_division=0)[0])
|
| 196 |
+
scores['time'].append(train_time)
|
| 197 |
+
logger.info(f"{name} Fold - F1: {scores['f1'][-1]:.3f}, Recall P1: {scores['recall_p1'][-1]:.3f}")
|
| 198 |
+
|
| 199 |
+
results[name] = {
|
| 200 |
+
'f1': np.mean(scores['f1']),
|
| 201 |
+
'recall_p1': np.mean(scores['recall_p1']),
|
| 202 |
+
'time': np.mean(scores['time'])
|
| 203 |
+
}
|
| 204 |
+
if name == 'LightGBM':
|
| 205 |
+
feature_importance = pd.Series(model.feature_importances_, index=PRIORITY_FEATURES).sort_values(ascending=False)
|
| 206 |
+
logger.info(f"LightGBM Priority Feature Importance:\n{feature_importance}")
|
| 207 |
+
|
| 208 |
+
logger.info("\nPriority Model Comparison:")
|
| 209 |
+
for name, res in results.items():
|
| 210 |
+
logger.info(f"{name}: F1={res['f1']:.3f}, Recall P1={res['recall_p1']:.3f}, Time={res['time']:.2f}s")
|
| 211 |
+
|
| 212 |
+
best_model = max(results, key=lambda k: results[k]['f1'] + results[k]['recall_p1'])
|
| 213 |
+
logger.info(f"Best Priority Model: {best_model}")
|
| 214 |
+
|
| 215 |
+
with model_lock:
|
| 216 |
+
priority_model = models[best_model]
|
| 217 |
+
priority_model.fit(X_scaled, y)
|
| 218 |
+
|
| 219 |
+
timestamp = int(time.time())
|
| 220 |
+
joblib.dump(priority_model, f'priority_model_{timestamp}.pkl')
|
| 221 |
+
joblib.dump(priority_scaler, 'priority_scaler.pkl')
|
| 222 |
+
joblib.dump(priority_imputer, 'priority_imputer.pkl')
|
| 223 |
+
logger.info("Priority model saved.")
|
| 224 |
+
except Exception as e:
|
| 225 |
+
logger.error(f"Error in priority training: {e}")
|
| 226 |
+
raise
|
| 227 |
+
|
| 228 |
+
def train_service_model():
|
| 229 |
+
global service_model, service_scaler, service_imputer, label_encoder_service
|
| 230 |
+
try:
|
| 231 |
+
data = pd.read_csv(DATASET_PATH)
|
| 232 |
+
data['Sexe'] = data['Sexe'].map({'Masculin': 0, 'Feminin': 1})
|
| 233 |
+
data['Enceinte'] = data['Enceinte'].astype(int)
|
| 234 |
+
data['ECG'] = data['ECG'].map({'Normal': 0, 'Anormal': 1})
|
| 235 |
+
data = enhanced_features(data)
|
| 236 |
+
data[['Suggested_Service', 'Suggested_Priority']] = data.apply(compute_service_and_priority, axis=1, result_type='expand')
|
| 237 |
+
|
| 238 |
+
X = data[SERVICE_FEATURES]
|
| 239 |
+
y = label_encoder_service.fit_transform(data['Service_Suivant'].fillna('Unknown'))
|
| 240 |
+
|
| 241 |
+
service_imputer = SimpleImputer(strategy='median')
|
| 242 |
+
X_imputed = service_imputer.fit_transform(X)
|
| 243 |
+
service_scaler = StandardScaler()
|
| 244 |
+
X_scaled = service_scaler.fit_transform(X_imputed)
|
| 245 |
+
|
| 246 |
+
models = {
|
| 247 |
+
'XGBoost': XGBClassifier(n_estimators=100, max_depth=4, learning_rate=0.05, n_jobs=-1, random_state=42),
|
| 248 |
+
'LightGBM': LGBMClassifier(n_estimators=100, max_depth=2, learning_rate=0.05, min_child_samples=5,
|
| 249 |
+
reg_alpha=0.5, reg_lambda=0.5, n_jobs=-1, random_state=42, verbose=-1),
|
| 250 |
+
'RandomForest': RandomForestClassifier(n_estimators=100, max_depth=8, n_jobs=-1, random_state=42),
|
| 251 |
+
'LogisticRegression': LogisticRegression(max_iter=1000, multi_class='multinomial', random_state=42),
|
| 252 |
+
'SVM': SVC(probability=True, random_state=42)
|
| 253 |
+
}
|
| 254 |
+
|
| 255 |
+
skf = StratifiedKFold(n_splits=5, shuffle=True, random_state=42)
|
| 256 |
+
results = {}
|
| 257 |
+
|
| 258 |
+
for name, model in models.items():
|
| 259 |
+
logger.info(f"\nEvaluating {name} for Service...")
|
| 260 |
+
scores = {'f1': [], 'time': []}
|
| 261 |
+
for train_idx, test_idx in tqdm(skf.split(X_scaled, y), total=5):
|
| 262 |
+
X_train, X_test = X_scaled[train_idx], X_scaled[test_idx]
|
| 263 |
+
y_train, y_test = y[train_idx], y[test_idx]
|
| 264 |
+
|
| 265 |
+
min_class_size = pd.Series(y_train).value_counts().min()
|
| 266 |
+
k_neighbors = min(5, max(1, min_class_size - 1))
|
| 267 |
+
pipeline = Pipeline([
|
| 268 |
+
('under', RandomUnderSampler(sampling_strategy='majority', random_state=42)),
|
| 269 |
+
('over', SMOTE(sampling_strategy=get_smote_strategy(y_train), random_state=42, k_neighbors=k_neighbors))
|
| 270 |
+
])
|
| 271 |
+
X_train_res, y_train_res = pipeline.fit_resample(X_train, y_train)
|
| 272 |
+
class_sizes = pd.Series(y_train_res).value_counts().to_dict()
|
| 273 |
+
logger.info(f"{name} - Resampled class sizes: {class_sizes}")
|
| 274 |
+
|
| 275 |
+
start_time = time.time()
|
| 276 |
+
model.fit(X_train_res, y_train_res)
|
| 277 |
+
train_time = time.time() - start_time
|
| 278 |
+
|
| 279 |
+
y_pred = model.predict(X_test)
|
| 280 |
+
scores['f1'].append(f1_score(y_test, y_pred, average='macro'))
|
| 281 |
+
scores['time'].append(train_time)
|
| 282 |
+
|
| 283 |
+
results[name] = {
|
| 284 |
+
'f1': np.mean(scores['f1']),
|
| 285 |
+
'time': np.mean(scores['time'])
|
| 286 |
+
}
|
| 287 |
+
if name == 'LightGBM':
|
| 288 |
+
feature_importance = pd.Series(model.feature_importances_, index=SERVICE_FEATURES).sort_values(ascending=False)
|
| 289 |
+
logger.info(f"LightGBM Service Feature Importance:\n{feature_importance}")
|
| 290 |
+
|
| 291 |
+
logger.info("\nService Model Comparison:")
|
| 292 |
+
for name, res in results.items():
|
| 293 |
+
logger.info(f"{name}: F1={res['f1']:.3f}, Time={res['time']:.2f}s")
|
| 294 |
+
|
| 295 |
+
best_model = max(results, key=lambda k: results[k]['f1'])
|
| 296 |
+
logger.info(f"Best Service Model: {best_model}")
|
| 297 |
+
|
| 298 |
+
with model_lock:
|
| 299 |
+
service_model = models[best_model]
|
| 300 |
+
service_model.fit(X_scaled, y)
|
| 301 |
+
|
| 302 |
+
timestamp = int(time.time())
|
| 303 |
+
joblib.dump(service_model, f'service_model_{timestamp}.pkl')
|
| 304 |
+
joblib.dump(service_scaler, 'service_scaler.pkl')
|
| 305 |
+
joblib.dump(service_imputer, 'service_imputer.pkl')
|
| 306 |
+
joblib.dump(label_encoder_service, 'label_encoder_service.pkl')
|
| 307 |
+
logger.info("Service model saved.")
|
| 308 |
+
except Exception as e:
|
| 309 |
+
logger.error(f"Error in service training: {e}")
|
| 310 |
+
raise
|
| 311 |
+
|
| 312 |
+
@retry(wait=wait_fixed(2), stop=stop_after_attempt(3))
|
| 313 |
+
def retrain_models():
|
| 314 |
+
global priority_model, service_model, priority_scaler, service_scaler, priority_imputer, service_imputer, label_encoder_service
|
| 315 |
+
while True:
|
| 316 |
+
time.sleep(3600)
|
| 317 |
+
if os.path.exists(NEW_DATA_FILE) and os.path.getsize(NEW_DATA_FILE) > 0:
|
| 318 |
+
try:
|
| 319 |
+
new_data = pd.read_csv(NEW_DATA_FILE)
|
| 320 |
+
if len(new_data) >= MIN_NEW_SAMPLES_FOR_RETRAIN:
|
| 321 |
+
orig_data = pd.read_csv(DATASET_PATH)
|
| 322 |
+
orig_data['Sexe'] = orig_data['Sexe'].map({'Masculin': 0, 'Feminin': 1})
|
| 323 |
+
orig_data['Enceinte'] = orig_data['Enceinte'].astype(int)
|
| 324 |
+
orig_data['ECG'] = orig_data['ECG'].map({'Normal': 0, 'Anormal': 1})
|
| 325 |
+
new_data = enhanced_features(new_data)
|
| 326 |
+
combined_data = pd.concat([orig_data, new_data], ignore_index=True)
|
| 327 |
+
|
| 328 |
+
# Priority retraining
|
| 329 |
+
X_priority = combined_data[PRIORITY_FEATURES]
|
| 330 |
+
y_priority = combined_data['Priorite'].values - 1
|
| 331 |
+
X_priority_imputed = priority_imputer.transform(X_priority)
|
| 332 |
+
X_priority_scaled = priority_scaler.transform(X_priority_imputed)
|
| 333 |
+
with model_lock:
|
| 334 |
+
priority_model.fit(X_priority_scaled, y_priority)
|
| 335 |
+
|
| 336 |
+
# Service retraining
|
| 337 |
+
X_service = combined_data[SERVICE_FEATURES]
|
| 338 |
+
y_service = label_encoder_service.transform(combined_data['Service_Suivant'].fillna('Unknown'))
|
| 339 |
+
X_service_imputed = service_imputer.transform(X_service)
|
| 340 |
+
X_service_scaled = service_scaler.transform(X_service_imputed)
|
| 341 |
+
with model_lock:
|
| 342 |
+
service_model.fit(X_service_scaled, y_service)
|
| 343 |
+
|
| 344 |
+
timestamp = int(time.time())
|
| 345 |
+
joblib.dump(priority_model, f'priority_model_{timestamp}.pkl')
|
| 346 |
+
joblib.dump(service_model, f'service_model_{timestamp}.pkl')
|
| 347 |
+
new_data.to_csv(f'archive_new_data_{timestamp}.csv', index=False)
|
| 348 |
+
open(NEW_DATA_FILE, 'w').close()
|
| 349 |
+
logger.info("Models retrained and saved.")
|
| 350 |
+
except Exception as e:
|
| 351 |
+
logger.error(f"Error in retrain: {e}")
|
| 352 |
+
|
| 353 |
+
@app.route('/predict', methods=['POST'])
|
| 354 |
+
def predict():
|
| 355 |
+
global priority_model, service_model, priority_scaler, service_scaler, priority_imputer, service_imputer, label_encoder_service
|
| 356 |
+
try:
|
| 357 |
+
data = request.get_json()
|
| 358 |
+
required_fields = ['age', 'sexe', 'enceinte', 'spo2', 'freq_resp', 'pouls', 'ecg', 'pa', 'temperature', 'imc']
|
| 359 |
+
missing_fields = [field for field in required_fields if field not in data]
|
| 360 |
+
if missing_fields:
|
| 361 |
+
return jsonify({'error': f'Missing fields: {", ".join(missing_fields)}'}), 400
|
| 362 |
+
|
| 363 |
+
input_data = {
|
| 364 |
+
'Age': float(data['age']),
|
| 365 |
+
'Sexe': 0 if data['sexe'].lower() == 'masculin' else 1,
|
| 366 |
+
'Enceinte': 1 if bool(data['enceinte']) else 0,
|
| 367 |
+
'SpO2': float(data['spo2']),
|
| 368 |
+
'Frquce_Rprtr(rpm)': float(data['freq_resp']),
|
| 369 |
+
'Pouls': float(data['pouls']),
|
| 370 |
+
'ECG': 0 if data['ecg'].lower() == 'normal' else 1,
|
| 371 |
+
'PA': float(data['pa']),
|
| 372 |
+
'Temperature': float(data['temperature']),
|
| 373 |
+
'IMC': float(data['imc']),
|
| 374 |
+
}
|
| 375 |
+
|
| 376 |
+
input_df = pd.DataFrame([input_data])
|
| 377 |
+
input_df = enhanced_features(input_df)
|
| 378 |
+
suggested_service, suggested_priority = compute_service_and_priority(input_df.iloc[0])
|
| 379 |
+
input_df['Suggested_Priority'] = suggested_priority
|
| 380 |
+
|
| 381 |
+
with model_lock:
|
| 382 |
+
# Priority prediction
|
| 383 |
+
priority_input = input_df[PRIORITY_FEATURES]
|
| 384 |
+
priority_imputed = priority_imputer.transform(priority_input)
|
| 385 |
+
priority_scaled = priority_scaler.transform(priority_imputed)
|
| 386 |
+
priority_probs = priority_model.predict_proba(priority_scaled)[0]
|
| 387 |
+
priority_pred = np.argmax(priority_probs) + 1
|
| 388 |
+
priority_conf = float(max(priority_probs))
|
| 389 |
+
|
| 390 |
+
# Service prediction
|
| 391 |
+
service_input = input_df[SERVICE_FEATURES]
|
| 392 |
+
service_imputed = service_imputer.transform(service_input)
|
| 393 |
+
service_scaled = service_scaler.transform(service_imputed)
|
| 394 |
+
service_probs = service_model.predict_proba(service_scaled)[0]
|
| 395 |
+
service_pred_idx = np.argmax(service_probs)
|
| 396 |
+
service_pred = label_encoder_service.inverse_transform([service_pred_idx])[0]
|
| 397 |
+
service_conf = float(max(service_probs))
|
| 398 |
+
|
| 399 |
+
# Fallback to rule-based logic if confidence is low or critical conditions apply
|
| 400 |
+
if priority_conf < 0.7 or input_df['Critical_Signs'][0] == 1:
|
| 401 |
+
priority_pred = suggested_priority
|
| 402 |
+
if service_conf < 0.7 or input_df['Enceinte'][0] == 1:
|
| 403 |
+
service_pred = suggested_service if input_df['Enceinte'][0] == 0 else 'Gynécologie/Obstétrique'
|
| 404 |
+
|
| 405 |
+
input_df['Priorite'] = priority_pred
|
| 406 |
+
input_df['Service_Suivant'] = service_pred
|
| 407 |
+
if not os.path.exists(NEW_DATA_FILE):
|
| 408 |
+
input_df.to_csv(NEW_DATA_FILE, index=False)
|
| 409 |
+
else:
|
| 410 |
+
input_df.to_csv(NEW_DATA_FILE, mode='a', header=False, index=False)
|
| 411 |
+
|
| 412 |
+
logger.info(f"Predicted: service={service_pred}, priority={priority_pred}, service_conf={service_conf}, priority_conf={priority_conf}")
|
| 413 |
+
return jsonify({
|
| 414 |
+
'priority': int(priority_pred),
|
| 415 |
+
'service_suivant': service_pred,
|
| 416 |
+
'priority_confidence': priority_conf,
|
| 417 |
+
'service_confidence': service_conf
|
| 418 |
+
})
|
| 419 |
+
except Exception as e:
|
| 420 |
+
logger.error(f"Prediction error: {str(e)}")
|
| 421 |
+
return jsonify({'error': str(e)}), 500
|
| 422 |
+
|
| 423 |
+
if __name__ == '__main__':
|
| 424 |
+
FORCE_RETRAIN = True
|
| 425 |
+
if FORCE_RETRAIN or not (os.path.exists('priority_model.pkl') and os.path.exists('service_model.pkl')):
|
| 426 |
+
train_priority_model()
|
| 427 |
+
train_service_model()
|
| 428 |
+
else:
|
| 429 |
+
with model_lock:
|
| 430 |
+
priority_model = joblib.load('priority_model.pkl')
|
| 431 |
+
service_model = joblib.load('service_model.pkl')
|
| 432 |
+
priority_scaler = joblib.load('priority_scaler.pkl')
|
| 433 |
+
service_scaler = joblib.load('service_scaler.pkl')
|
| 434 |
+
priority_imputer = joblib.load('priority_imputer.pkl')
|
| 435 |
+
service_imputer = joblib.load('service_imputer.pkl')
|
| 436 |
+
label_encoder_service = joblib.load('label_encoder_service.pkl')
|
| 437 |
+
|
| 438 |
+
retrain_thread = threading.Thread(target=retrain_models, daemon=True)
|
| 439 |
+
retrain_thread.start()
|
| 440 |
+
app.run(debug=False, host='0.0.0.0', port=5000)
|
requirements.txt
CHANGED
|
@@ -1,6 +1,11 @@
|
|
| 1 |
-
|
| 2 |
-
|
| 3 |
-
shinywidgets
|
| 4 |
-
plotly
|
| 5 |
pandas
|
| 6 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
flask
|
| 2 |
+
flask-cors
|
|
|
|
|
|
|
| 3 |
pandas
|
| 4 |
+
numpy
|
| 5 |
+
scikit-learn
|
| 6 |
+
xgboost
|
| 7 |
+
lightgbm
|
| 8 |
+
imblearn
|
| 9 |
+
joblib
|
| 10 |
+
tqdm
|
| 11 |
+
tenacity
|