Update src/report_generator.py
Browse files- src/report_generator.py +189 -61
src/report_generator.py
CHANGED
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@@ -2,6 +2,7 @@ import json
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import os
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import re
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import tempfile
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from datetime import datetime
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import streamlit as st
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from reportlab.lib.pagesizes import A4
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@@ -16,6 +17,44 @@ from text_processors import format_conversation_history
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from model import orchestrator_chat
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def extract_medical_json(conversation_text: str) -> dict:
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"""
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Extract medical report data from conversation text into structured JSON.
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@@ -138,12 +177,13 @@ def build_medical_report(data: dict) -> bytes:
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# Initialize elements list
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elems = []
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# Add logo and company header
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logo_path = "src/assets/
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#
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logo_img =
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company_info = Paragraph(
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"""
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<b>Daease</b><br/>
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@@ -153,19 +193,42 @@ def build_medical_report(data: dict) -> bytes:
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styles['CompanyInfo']
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)
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(
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elems.append(header_table)
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elems.append(Spacer(1, 0.3*inch))
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# Add title
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elems.append(Spacer(1, 0.2*inch))
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# Add a horizontal line
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@@ -179,31 +242,51 @@ def build_medical_report(data: dict) -> bytes:
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# Patient info in a clean table
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patient = data.get('patient', {})
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# Format the patient table data
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patient_data = [
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['Patient Information', ''],
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['Name:', patient.get('name', '–')],
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['Age:', patient.get('age', '–')],
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['Gender:', patient.get('gender', '–')],
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['Visit Date:', data.get('visit_date', datetime.now().strftime("%Y-%m-%d"))]
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]
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-
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patient_table.setStyle(TableStyle([
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('VALIGN', (0, 0), (-1, -1), 'MIDDLE'),
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('GRID', (0, 0), (
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('BOX', (0, 0), (
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]))
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elems.append(patient_table)
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elems.append(Spacer(1, 0.3*inch))
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# Helper to add sections as tables
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def add_section_table(title, content):
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if isinstance(content, list):
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content = '\n'.join(map(str, content))
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@@ -213,26 +296,43 @@ def build_medical_report(data: dict) -> bytes:
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if not content or content.strip() == '':
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content = '–'
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section_data = [
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[Paragraph(
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]
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# Create
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table = Table(section_data, colWidths=[doc.width * 0.97,
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table.setStyle(TableStyle([
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('BOX', (0, 0), (-1, -1), 1, colors.lightgrey),
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('LINEBELOW', (0, 0), (1, 0), 1, colors.navy),
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]))
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elems.append(KeepTogether([table, Spacer(1, 0.
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# Add all medical information sections as tables
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add_section_table("Chief Complaint", data.get('chief_complaint'))
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@@ -249,27 +349,51 @@ def build_medical_report(data: dict) -> bytes:
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# Add AI signature section
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elems.append(Spacer(1, 0.4*inch))
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#
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('ALIGN', (0, 0), (0, -1), 'CENTER'),
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('VALIGN', (0, 0), (0, -1), 'MIDDLE'),
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]))
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elems.append(
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#
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# Add disclaimer
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elems.append(Spacer(1, 0.
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disclaimer = Paragraph(
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"<i>Disclaimer: This report is generated by AI for informational purposes only. "
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"It should not replace professional medical advice, diagnosis, or treatment. "
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name='Disclaimer',
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fontName='Helvetica-Oblique',
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fontSize=8,
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textColor=colors.grey
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)
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)
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elems.append(disclaimer)
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@@ -349,7 +477,7 @@ def generate_and_download_report():
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st.session_state.pdf_data = pdf_bytes # Store PDF data for email
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# Display success message
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st.success("
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# Create two columns for the download and email buttons
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col1, col2 = st.columns(2)
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with col1:
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# Offer download
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st.download_button(
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label="Download Report",
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data=pdf_bytes,
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file_name=f"medical_report_{datetime.now().strftime('%Y%m%d')}.pdf",
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mime="application/pdf",
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with col2:
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# Email button that shows email form when clicked
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if st.button("Email Report"):
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st.session_state.show_email_form = True
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st.rerun()
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import os
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import re
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import tempfile
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import base64
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from datetime import datetime
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import streamlit as st
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from reportlab.lib.pagesizes import A4
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from model import orchestrator_chat
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# Function to encode images to base64 (similar to app.py)
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def get_image_base64(image_path):
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try:
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if os.path.exists(image_path):
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with open(image_path, "rb") as img_file:
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return base64.b64encode(img_file.read()).decode()
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else:
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print(f"Image not found: {image_path}")
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return None
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except Exception as e:
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print(f"Error loading image: {e}")
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return None
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# Function to get reportlab Image object or None
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def get_reportlab_image(image_path, width=1.5*inch, height=1.0*inch):
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try:
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if os.path.exists(image_path):
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return Image(image_path, width=width, height=height)
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else:
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# Try to find it in alternate locations
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alt_paths = [
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f"assets/{os.path.basename(image_path)}",
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f"assets/Logo/{os.path.basename(image_path)}",
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image_path.replace("src/assets", "assets")
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]
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for path in alt_paths:
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if os.path.exists(path):
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return Image(path, width=width, height=height)
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print(f"Image not found: {image_path}")
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return None
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except Exception as e:
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print(f"Error creating image: {str(e)}")
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return None
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def extract_medical_json(conversation_text: str) -> dict:
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"""
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Extract medical report data from conversation text into structured JSON.
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# Initialize elements list
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elems = []
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# Add logo and company header - use path from app.py
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logo_path = "src/assets/Logo_no_background.png"
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# Get logo image using our helper
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logo_img = get_reportlab_image(logo_path)
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# Create a table for the header (logo on left, company info on right)
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company_info = Paragraph(
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"""
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<b>Daease</b><br/>
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styles['CompanyInfo']
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)
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if logo_img:
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# Use the logo in the header table
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header_table = Table([[logo_img, company_info]], colWidths=[doc.width/2.0]*2)
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header_table.setStyle(TableStyle([
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('VALIGN', (0, 0), (-1, -1), 'TOP'),
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('ALIGN', (0, 0), (0, 0), 'LEFT'),
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('ALIGN', (1, 0), (1, 0), 'RIGHT'),
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('BOTTOMPADDING', (0, 0), (-1, -1), 10),
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]))
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else:
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# Fallback to text-only header if logo can't be loaded
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header_table = Table([['Daease', company_info]], colWidths=[doc.width/2.0]*2)
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header_table.setStyle(TableStyle([
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('VALIGN', (0, 0), (-1, -1), 'TOP'),
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('ALIGN', (0, 0), (0, 0), 'LEFT'),
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('ALIGN', (1, 0), (1, 0), 'RIGHT'),
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('BOTTOMPADDING', (0, 0), (-1, -1), 10),
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('FONTNAME', (0, 0), (0, 0), 'Helvetica-Bold'),
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('FONTSIZE', (0, 0), (0, 0), 14),
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('TEXTCOLOR', (0, 0), (0, 0), colors.navy),
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]))
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elems.append(header_table)
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elems.append(Spacer(1, 0.3*inch))
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# Add title - with more prominent styling
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title_style = ParagraphStyle(
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name='ReportTitleEnhanced',
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fontName='Helvetica-Bold',
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fontSize=18,
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leading=22,
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alignment=TA_CENTER,
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spaceAfter=0.3*inch,
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textColor=colors.navy
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)
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elems.append(Paragraph("Daease Medical Consultation Report", title_style))
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elems.append(Spacer(1, 0.2*inch))
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# Add a horizontal line
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# Patient info in a clean table
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patient = data.get('patient', {})
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# Format the patient table data with improved styling
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patient_data = [
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['Patient Information', '', ''],
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['Name:', patient.get('name', '–'), ''],
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['Age:', patient.get('age', '–'), ''],
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['Gender:', patient.get('gender', '–'), ''],
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['Visit Date:', data.get('visit_date', datetime.now().strftime("%Y-%m-%d")), '']
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]
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# Create a more structured patient table with better column distribution
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patient_table = Table(
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patient_data,
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colWidths=[doc.width * 0.2, doc.width * 0.5, doc.width * 0.3],
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rowHeights=[0.4*inch, 0.3*inch, 0.3*inch, 0.3*inch, 0.3*inch]
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)
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patient_table.setStyle(TableStyle([
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# Header row styling
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('BACKGROUND', (0, 0), (2, 0), colors.navy),
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('TEXTCOLOR', (0, 0), (2, 0), colors.white),
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('FONTNAME', (0, 0), (2, 0), 'Helvetica-Bold'),
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('SPAN', (0, 0), (2, 0)), # Span all columns in header
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('ALIGN', (0, 0), (2, 0), 'CENTER'),
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# Label column styling (first column)
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('FONTNAME', (0, 1), (0, -1), 'Helvetica-Bold'),
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('ALIGN', (0, 1), (0, -1), 'RIGHT'),
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('RIGHTPADDING', (0, 1), (0, -1), 10),
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# Value column styling (second column)
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('ALIGN', (1, 1), (1, -1), 'LEFT'),
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# Table borders and grid
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('VALIGN', (0, 0), (-1, -1), 'MIDDLE'),
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('GRID', (0, 0), (1, -1), 0.5, colors.lightgrey),
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('BOX', (0, 0), (1, -1), 1, colors.darkblue),
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# Alternating row colors for better readability
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('BACKGROUND', (0, 1), (1, 1), colors.whitesmoke),
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('BACKGROUND', (0, 3), (1, 3), colors.whitesmoke),
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]))
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elems.append(patient_table)
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elems.append(Spacer(1, 0.3*inch))
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# Helper to add sections as tables with improved styling
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def add_section_table(title, content):
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if isinstance(content, list):
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content = '\n'.join(map(str, content))
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if not content or content.strip() == '':
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content = '–'
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# Create a gradient-like effect with nested tables
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section_data = [
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# Header row with gradient-like styling
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[Paragraph(f"<b>{title}</b>",
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ParagraphStyle(
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name='TableHeader',
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fontName='Helvetica-Bold',
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fontSize=11,
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textColor=colors.white,
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alignment=TA_LEFT
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))],
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# Content row
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[Paragraph(content, styles['NormalText'])]
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]
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# Create the main table
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table = Table(section_data, colWidths=[doc.width * 0.97], rowHeights=[0.35*inch, None])
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table.setStyle(TableStyle([
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# Header styling with gradient-like effect
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('BACKGROUND', (0, 0), (0, 0), colors.navy),
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('LINEBELOW', (0, 0), (0, 0), 1, colors.darkblue),
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('LEFTPADDING', (0, 0), (0, 0), 10),
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('TOPPADDING', (0, 0), (0, 0), 6),
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('BOTTOMPADDING', (0, 0), (0, 0), 6),
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# Content styling
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('LEFTPADDING', (0, 1), (0, 1), 10),
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('RIGHTPADDING', (0, 1), (0, 1), 10),
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('TOPPADDING', (0, 1), (0, 1), 8),
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| 328 |
+
('BOTTOMPADDING', (0, 1), (0, 1), 8),
|
| 329 |
+
('BACKGROUND', (0, 1), (0, 1), colors.white),
|
| 330 |
+
|
| 331 |
+
# Border styling
|
| 332 |
('BOX', (0, 0), (-1, -1), 1, colors.lightgrey),
|
|
|
|
| 333 |
]))
|
| 334 |
|
| 335 |
+
elems.append(KeepTogether([table, Spacer(1, 0.15*inch)]))
|
| 336 |
|
| 337 |
# Add all medical information sections as tables
|
| 338 |
add_section_table("Chief Complaint", data.get('chief_complaint'))
|
|
|
|
| 349 |
# Add AI signature section
|
| 350 |
elems.append(Spacer(1, 0.4*inch))
|
| 351 |
|
| 352 |
+
# Add a horizontal line before signature
|
| 353 |
+
sig_line = Table([['']], colWidths=[doc.width], rowHeights=[1])
|
| 354 |
+
sig_line.setStyle(TableStyle([
|
| 355 |
+
('LINEABOVE', (0, 0), (-1, -1), 0.5, colors.grey),
|
| 356 |
+
]))
|
| 357 |
+
elems.append(sig_line)
|
| 358 |
+
elems.append(Spacer(1, 0.2*inch))
|
| 359 |
+
|
| 360 |
+
# Create a robust signature section
|
| 361 |
+
signature_text = Paragraph("<i>Generated by</i>", styles['NormalText'])
|
| 362 |
+
ai_name = Paragraph("<b>Daease AI Medical Assistant</b>", styles['NormalText'])
|
| 363 |
+
|
| 364 |
+
# Use the same logo path for signature
|
| 365 |
+
signature_img = get_reportlab_image("src/assets/logo.png", width=1.2*inch, height=0.8*inch)
|
| 366 |
+
|
| 367 |
+
if signature_img:
|
| 368 |
+
# Create a 3-column table for better alignment
|
| 369 |
+
sig_table = Table(
|
| 370 |
+
[[signature_text, '', ''],
|
| 371 |
+
[signature_img, '', ''],
|
| 372 |
+
[ai_name, '', '']],
|
| 373 |
+
colWidths=[doc.width * 0.3, doc.width * 0.35, doc.width * 0.35]
|
| 374 |
+
)
|
| 375 |
|
| 376 |
+
sig_table.setStyle(TableStyle([
|
| 377 |
('ALIGN', (0, 0), (0, -1), 'CENTER'),
|
| 378 |
('VALIGN', (0, 0), (0, -1), 'MIDDLE'),
|
| 379 |
]))
|
| 380 |
+
elems.append(sig_table)
|
| 381 |
+
else:
|
| 382 |
+
# Text-only fallback for signature
|
| 383 |
+
sig_text = Paragraph(
|
| 384 |
+
"<i>Generated by</i><br/><b>Daease AI Medical Assistant</b>",
|
| 385 |
+
ParagraphStyle(
|
| 386 |
+
name='SignatureText',
|
| 387 |
+
fontName='Helvetica-Bold',
|
| 388 |
+
fontSize=10,
|
| 389 |
+
alignment=TA_LEFT,
|
| 390 |
+
spaceAfter=0.1*inch
|
| 391 |
+
)
|
| 392 |
+
)
|
| 393 |
+
elems.append(sig_text)
|
| 394 |
|
| 395 |
+
# Add disclaimer with more distinctive styling
|
| 396 |
+
elems.append(Spacer(1, 0.3*inch))
|
| 397 |
disclaimer = Paragraph(
|
| 398 |
"<i>Disclaimer: This report is generated by AI for informational purposes only. "
|
| 399 |
"It should not replace professional medical advice, diagnosis, or treatment. "
|
|
|
|
| 402 |
name='Disclaimer',
|
| 403 |
fontName='Helvetica-Oblique',
|
| 404 |
fontSize=8,
|
| 405 |
+
textColor=colors.grey,
|
| 406 |
+
borderWidth=1,
|
| 407 |
+
borderColor=colors.lightgrey,
|
| 408 |
+
borderPadding=5,
|
| 409 |
+
borderRadius=2
|
| 410 |
)
|
| 411 |
)
|
| 412 |
elems.append(disclaimer)
|
|
|
|
| 477 |
st.session_state.pdf_data = pdf_bytes # Store PDF data for email
|
| 478 |
|
| 479 |
# Display success message
|
| 480 |
+
st.success("Your medical report is ready!")
|
| 481 |
|
| 482 |
# Create two columns for the download and email buttons
|
| 483 |
col1, col2 = st.columns(2)
|
|
|
|
| 485 |
with col1:
|
| 486 |
# Offer download
|
| 487 |
st.download_button(
|
| 488 |
+
label="📥 Download Report",
|
| 489 |
data=pdf_bytes,
|
| 490 |
file_name=f"medical_report_{datetime.now().strftime('%Y%m%d')}.pdf",
|
| 491 |
mime="application/pdf",
|
|
|
|
| 494 |
|
| 495 |
with col2:
|
| 496 |
# Email button that shows email form when clicked
|
| 497 |
+
if st.button("📧 Email Report"):
|
| 498 |
st.session_state.show_email_form = True
|
| 499 |
st.rerun()
|
| 500 |
|