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Update app.py
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app.py
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@@ -4,7 +4,6 @@ import gradio as gr
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from transformers import BertTokenizerFast, BertForTokenClassification
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# === ตั้งค่าโมเดลจาก Hub ===
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# เปลี่ยนเป็นโมเดลของคุณ เช่น "donla/htn-ner"
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MODEL_ID = "Donlagon007/htn-ner-v1"
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# โหลดโมเดล/โทเคนไนเซอร์ (CPU เป็นค่าเริ่มต้นใน Spaces)
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@@ -140,16 +139,19 @@ def extract_structured(text):
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key_findings.append(row)
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risks = set()
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fpg = next((cn_num(p["value"]) for p in pairs if p["test"] == "空腹血糖"), None)
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a1c = next((cn_num(p["value"]) for p in pairs if p["test"] == "HbA1c"), None)
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ldl = next((cn_num(p["value"]) for p in pairs if p["test"] == "LDL"), None)
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bp_val = next((p["value"] for p in pairs if p["test"] in ["診間血壓","家庭血壓","24小時動態血壓"]), None)
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if (fpg is not None and fpg >= 126) or (a1c is not None and a1c >= 6.5):
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risks.add("糖尿病")
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if ldl is not None and ldl >= 160:
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risks.add("高血脂")
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elif ldl is not None and ldl >= 130:
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risks.add("高血脂(輕度)")
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if bp_val:
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sys, dia = parse_bp(bp_val)
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if sys and dia and (sys >= 140 or dia >= 90):
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@@ -157,6 +159,7 @@ def extract_structured(text):
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if any(e["type"] == "DISEASE" and "高血壓" in e["text"] for e in entities):
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risks.add("高血壓")
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recs = []
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for e in entities:
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if e["type"] == "DRUG":
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@@ -191,27 +194,69 @@ def extract_structured(text):
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}
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return tokens, entities, structured
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# ---------- Gradio UI ----------
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EXAMPLE = "李偉(65歲,男),有高血壓與糖尿病。\n診間血壓152/94mmHg,空腹血糖138mg/dL,HbA1c 7.1%。\n建議使用ARB類藥物並低鹽飲食。"
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def run(text):
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tokens, entities, structured = extract_structured(text)
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with gr.Blocks(title="HTN NER (Chinese)") as demo:
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gr.Markdown("## Hypertension NER →
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inp = gr.Textbox(label="輸入文字 (中文)", lines=6, value=EXAMPLE)
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btn = gr.Button("Analyze")
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out_entities = gr.Code(label="Entities (spans)")
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out_tokens
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btn.click(run, inputs=inp, outputs=[out_struct, out_entities, out_tokens])
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demo.launch()
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if __name__ == "__main__":
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demo.launch(server_name="0.0.0.0")
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from transformers import BertTokenizerFast, BertForTokenClassification
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# === ตั้งค่าโมเดลจาก Hub ===
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MODEL_ID = "Donlagon007/htn-ner-v1"
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# โหลดโมเดล/โทเคนไนเซอร์ (CPU เป็นค่าเริ่มต้นใน Spaces)
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key_findings.append(row)
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risks = set()
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# 4.1 Diabetes
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fpg = next((cn_num(p["value"]) for p in pairs if p["test"] == "空腹血糖"), None)
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a1c = next((cn_num(p["value"]) for p in pairs if p["test"] == "HbA1c"), None)
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if (fpg is not None and fpg >= 126) or (a1c is not None and a1c >= 6.5):
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risks.add("糖尿病")
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# 4.2 Hyperlipidemia via LDL
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ldl = next((cn_num(p["value"]) for p in pairs if p["test"] == "LDL"), None)
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if ldl is not None and ldl >= 160:
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risks.add("高血脂")
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elif ldl is not None and ldl >= 130:
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risks.add("高血脂(輕度)")
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# 4.3 Hypertension via BP or DISEASE mention
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bp_val = next((p["value"] for p in pairs if p["test"] in ["診間血壓","家庭血壓","24小時動態血壓"]), None)
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if bp_val:
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sys, dia = parse_bp(bp_val)
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if sys and dia and (sys >= 140 or dia >= 90):
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if any(e["type"] == "DISEASE" and "高血壓" in e["text"] for e in entities):
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risks.add("高血壓")
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# recommendations
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recs = []
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for e in entities:
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if e["type"] == "DRUG":
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}
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return tokens, entities, structured
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# ---------- Human-readable report ----------
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def make_readable_report(structured: dict) -> str:
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name = structured.get("name") or "病人"
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age = structured.get("age")
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sex = structured.get("sex")
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head = f"【健檢摘要】{name}"
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if age is not None: head += f"({age}歲"
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else: head += "(年齡不詳"
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if sex: head += f",{sex})"
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else: head += ")"
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# key findings
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kfs = structured.get("key_findings", [])
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abn_lines, nor_lines = [], []
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for k in kfs:
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t, v = k.get("test"), k.get("value")
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st = k.get("status")
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if st in ("異常","偏高"):
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abn_lines.append(f".{t}: {v}({st})")
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elif st == "正常":
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nor_lines.append(f".{t}: {v}(正常)")
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else:
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nor_lines.append(f".{t}: {v}")
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risks = structured.get("disease_risk", [])
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recs = structured.get("recommendations", [])
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summary = structured.get("summary") or ""
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sections = [head, ""]
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if abn_lines:
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sections += ["【異常/偏高項目】"] + abn_lines + [""]
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if nor_lines:
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sections += ["【其他檢測】"] + nor_lines + [""]
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if risks:
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sections += ["【疾病風險/診斷】", "." + "、".join(risks), ""]
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if recs:
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sections += ["【建議】", "." + "、".join(recs), ""]
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if summary:
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sections += ["【摘要敘述】", summary, ""]
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return "\n".join(sections).strip()
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# ---------- Gradio UI ----------
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EXAMPLE = "李偉(65歲,男),有高血壓與糖尿病。\n診間血壓152/94mmHg,空腹血糖138mg/dL,HbA1c 7.1%。\n建議使用ARB類藥物並低鹽飲食。"
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def run(text):
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tokens, entities, structured = extract_structured(text)
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human_report = make_readable_report(structured)
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return (
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human_report,
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json.dumps(structured, ensure_ascii=False, indent=2),
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json.dumps(entities, ensure_ascii=False, indent=2),
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json.dumps(tokens, ensure_ascii=False, indent=2),
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)
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with gr.Blocks(title="HTN NER (Chinese)") as demo:
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gr.Markdown("## Hypertension NER → Human Report / JSON / Entities / Tokens")
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inp = gr.Textbox(label="輸入文字 (中文)", lines=6, value=EXAMPLE)
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btn = gr.Button("Analyze")
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out_report = gr.Textbox(label="Doctor Report", lines=12)
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out_struct = gr.Code(label="Structured JSON")
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out_entities = gr.Code(label="Entities (spans)")
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out_tokens = gr.Code(label="Token-level (B/I/O)")
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btn.click(run, inputs=inp, outputs=[out_report, out_struct, out_entities, out_tokens])
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if __name__ == "__main__":
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demo.launch(server_name="0.0.0.0")
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