app.py

import streamlit as st 
import tensorflow as tf
from PIL import Image
import numpy as np
import cv2
import matplotlib.pyplot as plt


model=tf.keras.models.load_model("dental_xray_seg.h5")
    
st.header("Segmentation of Teeth in Panoramic X-ray Image")

examples=["teeth_01.png","teeth_02.png","teeth_03.png","teeth_04.png","teeth_05.png"]

def load_image(image_file):
	img = Image.open(image_file)
	return img

def convert_one_channel(img):
    #some images have 3 channels , although they are grayscale image
    if len(img.shape)>2:
        img= cv2.cvtColor(img, cv2.COLOR_BGR2GRAY)
        return img
    else:
        return img
    
def convert_rgb(img):
    #some images have 3 channels , although they are grayscale image
    if len(img.shape)==2:
        img= cv2.cvtColor(img,cv2.COLOR_GRAY2RGB)  
        return img
    else:
        return img
    
    
st.subheader("Upload Dental Panoramic X-ray Image Image")
image_file = st.file_uploader("Upload Images", type=["png","jpg","jpeg"])

col1, col2, col3, col4, col5 = st.columns(5)
with col1:
    ex=load_image(examples[0])
    st.image(ex,width=200)
    if st.button('Example 1'):
        image_file=examples[0]

with col2:
    ex1=load_image(examples[1])
    st.image(ex1,width=200)
    if st.button('Example 2'):
        image_file=examples[1]

with col3:
    ex2=load_image(examples[2])
    st.image(ex2,width=200)
    if st.button('Example 3'):
        image_file=examples[2]
    
with col4:
    ex2=load_image(examples[3])
    st.image(ex2,width=200)
    if st.button('Example 4'):
        image_file=examples[3]

with col5:
    ex2=load_image(examples[4])
    st.image(ex2,width=200)
    if st.button('Example 5'):
        image_file=examples[4]
    
if image_file is not None:

      img=load_image(image_file)
      
      st.text("Making A Prediction ....")
      st.image(img,width=850)
      
      img=np.asarray(img)
  
      img_cv=convert_one_channel(img)
      img_cv=cv2.resize(img_cv,(512,512), interpolation=cv2.INTER_LANCZOS4)
      img_cv=np.float32(img_cv/255)
      
      img_cv=np.reshape(img_cv,(1,512,512,1))
      prediction=model.predict(img_cv)
      predicted=prediction[0]
      predicted = cv2.resize(predicted, (img.shape[1],img.shape[0]), interpolation=cv2.INTER_LANCZOS4)
      mask=np.uint8(predicted*255)# 
      _, mask = cv2.threshold(mask, thresh=0, maxval=255, type=cv2.THRESH_BINARY+cv2.THRESH_OTSU)
      kernel =( np.ones((5,5), dtype=np.float32))
      mask=cv2.morphologyEx(mask, cv2.MORPH_OPEN, kernel,iterations=1 )  
      mask=cv2.morphologyEx(mask, cv2.MORPH_CLOSE, kernel,iterations=1 )
      cnts,hieararch=cv2.findContours(mask,cv2.RETR_TREE,cv2.CHAIN_APPROX_SIMPLE)
      output = cv2.drawContours(convert_rgb(img), cnts, -1, (255, 0, 0) , 3)


      if output is not None :      
          st.subheader("Predicted Image")  
          st.write(output.shape)
          st.image(output,width=850)

      st.text("DONE ! ....")
      
#if image_file is not None:
#    img=load_image(image_file)
#      
#    st.text("Making A Prediction ....")
#    st.image(img,width=850)
#      
#    img=np.asarray(img)
#  
#    img_cv=convert_one_channel(img)
#    img_cv=cv2.resize(img_cv,(512,512), interpolation=cv2.INTER_LANCZOS4)
#    img_cv=np.float32(img_cv/255)
#     
#    img_cv=np.reshape(img_cv,(1,512,512,1))
#    predict_img=model.predict(img_cv)
#    predict=predict_img[1,:,:,0]
#    plt.imsave("predict.png",predict_img)
#    
#    ## Plotting - Пример результата
#    img = cv2.imread(image_file)
#
#    predict1 = cv2.resize(predict_img, (img.shape[1], img.shape[0]), interpolation=cv2.INTER_LANCZOS4)
#
#    mask = np.uint8(predict1 * 255)
#    _, mask = cv2.threshold(mask, thresh=255/2, maxval=255, type=cv2.THRESH_BINARY)
#    cnts, hierarchy = cv2.findContours(mask, cv2.RETR_TREE, cv2.CHAIN_APPROX_SIMPLE)
#    img = cv2.drawContours(img, cnts, -1, (255, 0, 0), 2)
#    cv2_imshow(img)