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Update data/rag/knowledge_base/Comamonas/kerstersii.json

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data/rag/knowledge_base/Comamonas/kerstersii.json CHANGED
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+ {
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+ "genus": "Comamonas",
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+ "species": "kerstersii",
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+ "full_name": "Comamonas kerstersii",
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+ "clinical_significance": "An emerging human pathogen frequently associated with acute appendicitis and peritonitis. Also reported in bacteremia, pelvic inflammatory disease, and urinary tract infections. Likely underdiagnosed prior to widespread MALDI-TOF use.",
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+ "phenotype_profile": {
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+ "morphology": "Slender, motile Gram-negative rods with polar flagella.",
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+ "culture": "Non-pigmented, smooth colonies on blood agar. NLF on MacConkey. Aerobic growth.",
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+ "biochemical": [
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+ "Oxidase positive",
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+ "Catalase positive",
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+ "Non-fermentative",
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+ "Nitrate reduction positive",
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+ "Indole negative",
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+ "Urease negative",
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+ "ONPG negative",
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+ "Motile"
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+ ]
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+ },
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+ "differentiation": {
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+ "from close species": [
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+ "More clinically significant than C. testosteronii.",
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+ "Often associated with polymicrobial intra-abdominal infections.",
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+ "Identified reliably only through MALDI-TOF or sequencing."
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+ ],
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+ "from other genera": [
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+ "No DNase activity (unlike Delftia acidovorans).",
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+ "No pigment (unlike some Pseudomonas).",
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+ "Non-fermenting profile excludes Enterobacterales."
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+ ]
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+ },
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+ "virulence_factors": [
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+ "Adhesion to damaged mucosa",
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+ "Biofilm formation (limited evidence)",
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+ "Environmental persistence"
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+ ],
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+ "confirmation_methods": [
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+ "MALDI-TOF MS (preferred)",
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+ "16S rRNA sequencing",
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+ "Biochemical non-fermenter profile"
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+ ],
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+ "treatment_notes": "Generally susceptible to fluoroquinolones, piperacillin–tazobactam, carbapenems, and TMP-SMX. Resistance remains uncommon but testing required.",
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+ "notes": "Most isolates originate from appendiceal abscesses or perforated appendicitis specimens.",
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+ "references": [
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+ "Comamonas kerstersii infection reports",
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+ "Intra-abdominal polymicrobial infection studies"
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+ ]
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+ }