File size: 1,639 Bytes
df98fca b5d4677 df98fca | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 | # Copyright (c) Meta Platforms, Inc. and affiliates.
# All rights reserved.
#
# This source code is licensed under the BSD-style license found in the
# LICENSE file in the root directory of this source tree.
[build-system]
requires = ["setuptools>=45", "wheel"]
build-backend = "setuptools.build_meta"
[project]
name = "openenv-bio-experiment"
version = "0.1.0"
description = "RL environment for biological experiment pipeline planning"
requires-python = ">=3.10"
dependencies = [
"openenv-core[core]>=0.2.0",
"numpy>=1.24.0",
"scipy>=1.10.0",
"pydantic>=2.0.0",
]
[project.optional-dependencies]
train = [
"gymnasium>=0.29.0",
]
bio = [
"biopython>=1.84",
"gseapy>=1.1.3",
"scanpy>=1.10.0",
]
dev = [
"pytest>=8.0.0",
"pytest-cov>=4.0.0",
"gymnasium>=0.29.0",
]
[project.scripts]
server = "hackathon.server.app:main"
[tool.uv]
package = false
[tool.setuptools]
include-package-data = true
packages = [
"hackathon",
"hackathon.server",
"hackathon.server.simulator",
"hackathon.server.rules",
"hackathon.server.rewards",
"hackathon.server.tasks",
"hackathon.server.subagents",
"hackathon.training",
"hackathon.tests",
]
[tool.setuptools.package-dir]
hackathon = "."
"hackathon.server" = "server"
"hackathon.server.simulator" = "server/simulator"
"hackathon.server.rules" = "server/rules"
"hackathon.server.rewards" = "server/rewards"
"hackathon.server.tasks" = "server/tasks"
"hackathon.server.subagents" = "server/subagents"
"hackathon.training" = "training"
"hackathon.tests" = "tests"
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