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17f1f54 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 | import os
import cv2
import math
import torch
import numpy as np
from dtw import dtw
from constants import PAD_TOKEN
from helpers import getSkeletalModelStructure
# This is the format of the 3D data, outputted from the Inverse Kinematics model
# def getSkeletalModelStructure():
# # Definition of skeleton model structure:
# # The structure is an n-tuple of:
# #
# # (index of a start point, index of an end point, index of a bone)
# #
# # E.g., this simple skeletal model
# #
# # (0)
# # |
# # |
# # 0
# # |
# # |
# # (2)--1--(1)--1--(3)
# # | |
# # | |
# # 2 2
# # | |
# # | |
# # (4) (5)
# #
# # has this structure:
# #
# # (
# # (0, 1, 0),
# # (1, 2, 1),
# # (1, 3, 1),
# # (2, 4, 2),
# # (3, 5, 2),
# # )
# #
# # Warning 1: The structure has to be a tree.
# # Warning 2: The order isn't random. The order is from a root to lists.
# #
# return (
# # head
# (0, 1, 0),
# # left shoulder
# (1, 2, 1),
# # left arm
# (2, 3, 2),
# # (3, 4, 3),
# # Changed to avoid wrist, go straight to hands
# (3, 29, 3),
# # right shoulder
# (1, 5, 1),
# # right arm
# (5, 6, 2),
# # (6, 7, 3),
# # Changed to avoid wrist, go straight to hands
# (6, 8, 3),
# # left hand - wrist
# # (7, 8, 4),
# # left hand - palm
# (8, 9, 5),
# (8, 13, 9),
# (8, 17, 13),
# (8, 21, 17),
# (8, 25, 21),
# # left hand - 1st finger
# (9, 10, 6),
# (10, 11, 7),
# (11, 12, 8),
# # left hand - 2nd finger
# (13, 14, 10),
# (14, 15, 11),
# (15, 16, 12),
# # left hand - 3rd finger
# (17, 18, 14),
# (18, 19, 15),
# (19, 20, 16),
# # left hand - 4th finger
# (21, 22, 18),
# (22, 23, 19),
# (23, 24, 20),
# # left hand - 5th finger
# (25, 26, 22),
# (26, 27, 23),
# (27, 28, 24),
# # right hand - wrist
# # (4, 29, 4),
# # right hand - palm
# (29, 30, 5),
# (29, 34, 9),
# (29, 38, 13),
# (29, 42, 17),
# (29, 46, 21),
# # right hand - 1st finger
# (30, 31, 6),
# (31, 32, 7),
# (32, 33, 8),
# # right hand - 2nd finger
# (34, 35, 10),
# (35, 36, 11),
# (36, 37, 12),
# # right hand - 3rd finger
# (38, 39, 14),
# (39, 40, 15),
# (40, 41, 16),
# # right hand - 4th finger
# (42, 43, 18),
# (43, 44, 19),
# (44, 45, 20),
# # right hand - 5th finger
# (46, 47, 22),
# (47, 48, 23),
# (48, 49, 24),
# )
# Plot a video given a tensor of joints, a file path, video name and references/sequence ID
def plot_video(joints,
file_path,
video_name,
references=None,
skip_frames=1,
sequence_ID=None):
# Create video template
FPS = (25 // skip_frames)
# ipdb.set_trace()
video_file = file_path + "/{}.mp4".format(sequence_ID.split(".")[0])
video_path, video_name = os.path.split(video_file)
if not os.path.exists(video_path):
os.mkdir(video_path)
fourcc = cv2.VideoWriter_fourcc(*'mp4v')
if references is None:
video = cv2.VideoWriter(video_file, fourcc, float(FPS), (650, 650), True)
elif references is not None:
video = cv2.VideoWriter(video_file, fourcc, float(FPS), (1300, 650), True) # Long
num_frames = 0
for (j, frame_joints) in enumerate(joints):
# Reached padding
if PAD_TOKEN in frame_joints.astype('str').tolist():
continue
# Initialise frame of white
frame = np.ones((650, 650, 3), np.uint8) * 255
# Cut off the percent_tok, multiply by 3 to restore joint size
# TODO - Remove the *3 if the joints weren't divided by 3 in data creation
frame_joints = frame_joints[:-1] * 3
# Reduce the frame joints down to 2D for visualisation - Frame joints 2d shape is (48,2)
frame_joints_2d = np.reshape(frame_joints, (50, 3))[:, :2]
# Draw the frame given 2D joints
draw_frame_2D(frame, frame_joints_2d)
cv2.putText(frame, "Predicted Sign Pose", (180, 600), cv2.FONT_HERSHEY_SIMPLEX, 1,
(0, 0, 0), 2)
# If reference is provided, create and concatenate on the end
if references is not None:
# Extract the reference joints
ref_joints = references[j]
# Initialise frame of white
ref_frame = np.ones((650, 650, 3), np.uint8) * 255
# Cut off the percent_tok and multiply each joint by 3 (as was reduced in training files)
ref_joints = ref_joints[:-1] * 3
# Reduce the frame joints down to 2D- Frame joints 2d shape is (48,2)
ref_joints_2d = np.reshape(ref_joints, (50, 3))[:, :2]
# Draw these joints on the frame
draw_frame_2D(ref_frame, ref_joints_2d)
cv2.putText(ref_frame, "Ground Truth Pose", (190, 600), cv2.FONT_HERSHEY_SIMPLEX, 1,
(0, 0, 0), 2)
frame = np.concatenate((frame, ref_frame), axis=1)
sequence_ID_write = "Sequence ID: " + sequence_ID.split("/")[-1]
cv2.putText(frame, sequence_ID_write, (150, 50), cv2.FONT_HERSHEY_SIMPLEX, 1,
(0, 0, 0), 2)
# Write the video frame
video.write(frame)
num_frames += 1
# Release the video
video.release()
# Draw a line between two points, if they are positive points
def draw_line(im, joint1, joint2, c=(0, 0, 255),t=1, width=3):
thresh = -100
if joint1[0] > thresh and joint1[1] > thresh and joint2[0] > thresh and joint2[1] > thresh:
center = (int((joint1[0] + joint2[0]) / 2), int((joint1[1] + joint2[1]) / 2))
length = int(math.sqrt(((joint1[0] - joint2[0]) ** 2) + ((joint1[1] - joint2[1]) ** 2))/2)
angle = math.degrees(math.atan2((joint1[0] - joint2[0]),(joint1[1] - joint2[1])))
cv2.ellipse(im, center, (width,length), -angle,0.0,360.0, c, -1)
# Draw the frame given 2D joints that are in the Inverse Kinematics format
def draw_frame_2D(frame, joints):
# Line to be between the stacked
draw_line(frame, [1, 650], [1, 1], c=(0,0,0), t=1, width=1)
# Give an offset to center the skeleton around
offset = [350, 250]
# Get the skeleton structure details of each bone, and size
skeleton = getSkeletalModelStructure()
skeleton = np.array(skeleton)
number = skeleton.shape[0]
# Increase the size and position of the joints
joints = joints * 10 * 12 * 2
joints = joints + np.ones((50, 2)) * offset
# Loop through each of the bone structures, and plot the bone
for j in range(number):
c = get_bone_colour(skeleton,j)
draw_line(frame, [joints[skeleton[j, 0]][0], joints[skeleton[j, 0]][1]],
[joints[skeleton[j, 1]][0], joints[skeleton[j, 1]][1]], c=c, t=1, width=1)
# get bone colour given index
def get_bone_colour(skeleton,j):
return (0, 0, 0)
# Apply DTW to the produced sequence, so it can be visually compared to the reference sequence
def alter_DTW_timing(pred_seq,ref_seq):
# Define a cost function
euclidean_norm = lambda x, y: np.sum(np.abs(x - y))
# Cut the reference down to the max count value
_ , ref_max_idx = torch.max(ref_seq[:, -1], 0)
if ref_max_idx == 0: ref_max_idx += 1
# Cut down frames by counter
ref_seq = ref_seq[:ref_max_idx,:].cpu().numpy()
# Cut the hypothesis down to the max count value
_, hyp_max_idx = torch.max(pred_seq[:, -1], 0)
if hyp_max_idx == 0: hyp_max_idx += 1
# Cut down frames by counter
pred_seq = pred_seq[:hyp_max_idx,:].cpu().numpy()
#pred_seq = pred_seq[:ref_max_idx, :].cpu().numpy()
# Run DTW on the reference and predicted sequence
d, cost_matrix, acc_cost_matrix, path = dtw(ref_seq[:,:-1], pred_seq[:,:-1], dist=euclidean_norm)
# Normalise the dtw cost by sequence length
d = d / acc_cost_matrix.shape[0]
# Initialise new sequence
new_pred_seq = np.zeros_like(ref_seq)
# j tracks the position in the reference sequence
j = 0
skips = 0
squeeze_frames = []
for (i, pred_num) in enumerate(path[0]):
if i == len(path[0]) - 1:
break
if path[1][i] == path[1][i + 1]:
skips += 1
# If a double coming up
if path[0][i] == path[0][i + 1]:
squeeze_frames.append(pred_seq[i - skips])
j += 1
# Just finished a double
elif path[0][i] == path[0][i - 1]:
new_pred_seq[pred_num] = avg_frames(squeeze_frames)
squeeze_frames = []
else:
new_pred_seq[pred_num] = pred_seq[i - skips]
return new_pred_seq, ref_seq, d
# Find the average of the given frames
def avg_frames(frames):
frames_sum = np.zeros_like(frames[0])
for frame in frames:
frames_sum += frame
avg_frame = frames_sum / len(frames)
return avg_frame |