Update app.py
Browse files
app.py
CHANGED
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@@ -1,271 +1,14 @@
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import gradio as gr
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import
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#
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# -------------------------------------------------------
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def load_guidelines(json_file_path):
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try:
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with open(json_file_path, 'r', encoding='utf-8') as file:
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data = json.load(file)
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return data['guidelines']
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except Exception as e:
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print(f"Error loading JSON file: {e}")
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return []
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guidelines = load_guidelines("enriched_guidelines_with_lab_findings_completed.json")
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# -------------------------------------------------------
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# تحلیل علائم
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# -------------------------------------------------------
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def analyze_symptoms(symptoms_input, guidelines):
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symptoms_input = [s.lower().strip() for s in symptoms_input.split(',') if s.strip()]
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matched_diseases = defaultdict(lambda: {'score': 0, 'matched_symptoms': [], 'alarm_matched': False, 'full_guideline_data': None})
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key_symptoms_weights = {
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'signs of liver decompensation': 2.0,
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'bloody diarrhea': 1.5,
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'fever (≥38°c)': 1.3,
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'abdominal pain (sudden or progressive)': 1.2,
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'abdominal distension (ascites)': 1.2,
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'back pain': 1.1,
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'dyspepsia': 1.0,
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'asymptomatic (incidental finding)': 0.8
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}
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for guideline in guidelines:
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disease_name = guideline.get('condition_name', 'Unknown')
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icd_code = guideline.get('icd_code', 'N/A')
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guideline_symptoms = [s.lower().strip() for s in guideline.get('symptoms', [])]
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alarm_features = guideline.get('alarm_features', {})
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matched_symptoms = [s for s in symptoms_input if s in guideline_symptoms]
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if matched_symptoms:
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score = sum([key_symptoms_weights.get(symptom, 1.0) for symptom in matched_symptoms])
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is_alarm_matched = any(
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symptom.lower() in str(alarm_features.values()).lower()
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for symptom in matched_symptoms
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)
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matched_diseases[disease_name] = {
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'score': score,
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'icd_code': icd_code,
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'matched_symptoms': matched_symptoms,
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'alarm_matched': is_alarm_matched,
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'full_guideline_data': guideline
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}
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results = []
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total_score = sum(d['score'] for d in matched_diseases.values())
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if total_score == 0:
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return []
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for disease_name, data in matched_diseases.items():
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probability = (data['score'] / total_score) * 100
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if data['alarm_matched']:
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probability *= 1.5
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probability = max(min(probability, 100), 5)
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results.append({
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'disease_name': disease_name,
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'icd_code': data['icd_code'],
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'probability': round(probability, 2),
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'matched_symptoms': ', '.join(data['matched_symptoms']),
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'full_data': data['full_guideline_data']
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})
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results.sort(key=lambda x: x['probability'], reverse=True)
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return results
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# -------------------------------------------------------
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# تحلیل آزمایشها
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# -------------------------------------------------------
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synonyms = {
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"ast": ["ast", "sgot", "aspartate aminotransferase"],
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"alt": ["alt", "sgpt", "alanine aminotransferase"],
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"serum glucose": ["serum glucose", "glucose", "blood sugar"],
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"bilirubin": ["bilirubin", "total bilirubin"],
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"alkaline phosphatase": ["alkaline phosphatase", "alp"],
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"albumin": ["albumin", "serum albumin"],
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"prothrombin time": ["prothrombin time", "pt", "protime"],
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"creatinine": ["creatinine", "serum creatinine"],
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"platelets": ["platelets", "plts"],
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"hemoglobin": ["hemoglobin", "hgb"],
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"wbc": ["wbc", "white blood cell count"]
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}
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def normalize_test_name(name):
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name = name.lower().strip()
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for key, syns in synonyms.items():
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if name in syns:
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return key
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for key in synonyms.keys():
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if difflib.get_close_matches(name, synonyms[key], cutoff=0.7):
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return key
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return name
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def check_condition(user_value, expected):
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try:
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user_val = float(user_value)
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if expected.startswith("<="):
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return user_val <= float(expected[2:])
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elif expected.startswith(">="):
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return user_val >= float(expected[2:])
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elif expected.startswith("<"):
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return user_val < float(expected[1:])
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elif expected.startswith(">"):
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return user_val > float(expected[1:])
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else:
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return str(user_val) == expected
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except:
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return expected.lower() in user_value.lower() or user_value.lower() in expected.lower()
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def analyze_lab_results(lab_results_text, guidelines):
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lab_results_input = {}
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for line in lab_results_text.split('\n'):
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if ':' in line:
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key, value = line.split(':', 1)
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norm_key = normalize_test_name(key)
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lab_results_input[norm_key] = value.strip()
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matched_diseases = []
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for guideline in guidelines:
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disease_name = guideline.get('condition_name', 'Unknown')
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icd_code = guideline.get('icd_code', 'N/A')
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lab_findings = guideline.get('lab_findings', {})
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matches = []
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for lab_test, criteria in lab_findings.items():
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norm_test = normalize_test_name(lab_test)
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if norm_test in lab_results_input:
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user_value = lab_results_input[norm_test]
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expected = str(criteria.get('expected', '')).strip()
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meaning = criteria.get('meaning', '')
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if check_condition(user_value, expected):
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matches.append({
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'test': lab_test,
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'user_value': user_value,
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'expected': expected,
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'meaning': meaning
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})
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if matches:
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matched_diseases.append({
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'disease_name': disease_name,
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'icd_code': icd_code,
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'lab_matches': matches,
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'full_data': guideline
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})
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return matched_diseases
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# -------------------------------------------------------
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# ترکیب نتایج برای UI
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# -------------------------------------------------------
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def combined_analysis_for_ui(symptoms, lab_results_text):
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symptom_results = analyze_symptoms(symptoms, guidelines)
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lab_results = analyze_lab_results(lab_results_text, guidelines)
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if not symptom_results and not lab_results:
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return [], "❌ هیچ بیماری مرتبطی یافت نشد.", [], []
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symptom_table_data = []
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for r in symptom_results:
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symptom_table_data.append([r['disease_name'], r['icd_code'], f"{r['probability']}%", r['matched_symptoms']])
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lab_results_html = ""
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if lab_results:
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lab_results_html += "<h4>🧪 تحلیل بر اساس آزمایشها:</h4>"
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for lab in lab_results:
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lab_results_html += f"<b>{lab['disease_name']}</b> (ICD: {lab['icd_code']})<br>"
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for match in lab['lab_matches']:
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lab_results_html += f" - <b>{match['test']}</b>: {match['user_value']} (انتظار: {match['expected']}) → {match['meaning']}<br>"
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lab_results_html += "<br>"
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return symptom_table_data, lab_results_html, symptom_results, lab_results
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# -------------------------------------------------------
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# نمایش جزئیات هنگام کلیک روی بیماری
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# -------------------------------------------------------
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def show_details(evt: gr.SelectData, symptom_results):
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if evt is None or evt.index is None:
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return "هیچ بیماری انتخاب نشده است."
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selected_row = evt.index[0] if isinstance(evt.index, (list, tuple)) else evt.index
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if selected_row < 0 or selected_row >= len(symptom_results):
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return "بیماری انتخاب شده معتبر نیست."
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disease = symptom_results[selected_row]["full_data"]
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html = f"<h4 style='color:#2E86C1;'>{disease.get('condition_name','Unknown')}</h4>"
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if disease.get('diagnosis_criteria'):
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html += "<b>معیارهای تشخیصی:</b><ul>"
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for item in disease['diagnosis_criteria']:
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html += f"<li>{item}</li>"
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html += "</ul>"
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if disease.get('alarm_features'):
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html += "<b>علائم هشدار:</b><ul>"
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for k, v in disease['alarm_features'].items():
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html += f"<li><b>{k}</b>: {v}</li>"
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html += "</ul>"
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if disease.get('first_line_treatment'):
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html += "<b>درمان خط اول:</b><ul>"
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for t in disease['first_line_treatment']:
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html += f"<li>{t}</li>"
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html += "</ul>"
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if disease.get('second_line_treatment'):
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html += "<b>درمان خط دوم:</b><ul>"
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for t in disease['second_line_treatment']:
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html += f"<li>{t}</li>"
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html += "</ul>"
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return html
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# -------------------------------------------------------
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# رابط Gradio
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# -------------------------------------------------------
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with gr.Blocks(theme=gr.themes.Soft()) as demo:
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gr.Markdown("<h2 style='text-align:center;color:#2E86C1;'>💡 سیستم هوشمند تحلیل علائم و آزمایشها</h2>")
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with gr.Row():
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symptoms_input = gr.Textbox(label="✅ علائم (با کاما جدا کنید)")
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lab_results_input = gr.Textbox(label="🧪 نتایج آزمایش (هر خط: نام: مقدار)")
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analyze_button = gr.Button("🔍 تحلیل کن")
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with gr.Row():
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with gr.Column(scale=2):
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symptom_table_output = gr.Dataframe(headers=["بیماری", "ICD", "احتمال", "علائم منطبق"], interactive=False)
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lab_results_output = gr.HTML()
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with gr.Column(scale=3):
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detailed_output = gr.HTML()
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symptom_results_state = gr.State()
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lab_results_state = gr.State()
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analyze_button.click(
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fn=combined_analysis_for_ui,
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inputs=[symptoms_input, lab_results_input],
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outputs=[symptom_table_output, lab_results_output, symptom_results_state, lab_results_state]
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)
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symptom_table_output.select(
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fn=show_details,
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inputs=[symptom_results_state],
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outputs=detailed_output
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)
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if __name__ == "__main__":
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demo.launch()
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import gradio as gr
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import os
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# این کد اپلیکیشن را از Space خصوصی شما بارگذاری میکند
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# مطمئن شوید که نام Space خصوصی را درست وارد کردهاید
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# برای دسترسی به Space خصوصی، به یک توکن نیاز است که در گام بعدی تنظیم میکنیم
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demo = gr.load(
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"spaces/Feri007/GIapp-private",
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hf_token=os.environ.get("HF_TOKEN")
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)
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# نیازی به تغییر این بخش نیست
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if __name__ == "__main__":
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| 14 |
demo.launch()
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