lib/eval/eval_utils.py

# Some functions are borrowed from https://github.com/akanazawa/human_dynamics/blob/master/src/evaluation/eval_util.py
# Adhere to their licence to use these functions
from pathlib import Path

import torch
import numpy as np
from matplotlib import pyplot as plt


def compute_accel(joints):
    """
    Computes acceleration of 3D joints.
    Args:
        joints (Nx25x3).
    Returns:
        Accelerations (N-2).
    """
    velocities = joints[1:] - joints[:-1]
    acceleration = velocities[1:] - velocities[:-1]
    acceleration_normed = np.linalg.norm(acceleration, axis=2)
    return np.mean(acceleration_normed, axis=1)


def compute_error_accel(joints_gt, joints_pred, vis=None):
    """
    Computes acceleration error:
        1/(n-2) \sum_{i=1}^{n-1} X_{i-1} - 2X_i + X_{i+1}
    Note that for each frame that is not visible, three entries in the
    acceleration error should be zero'd out.
    Args:
        joints_gt (Nx14x3).
        joints_pred (Nx14x3).
        vis (N).
    Returns:
        error_accel (N-2).
    """
    # (N-2)x14x3
    accel_gt = joints_gt[:-2] - 2 * joints_gt[1:-1] + joints_gt[2:]
    accel_pred = joints_pred[:-2] - 2 * joints_pred[1:-1] + joints_pred[2:]

    normed = np.linalg.norm(accel_pred - accel_gt, axis=2)

    if vis is None:
        new_vis = np.ones(len(normed), dtype=bool)
    else:
        invis = np.logical_not(vis)
        invis1 = np.roll(invis, -1)
        invis2 = np.roll(invis, -2)
        new_invis = np.logical_or(invis, np.logical_or(invis1, invis2))[:-2]
        new_vis = np.logical_not(new_invis)

    return np.mean(normed[new_vis], axis=1)


def compute_error_verts(pred_verts, target_verts=None, target_theta=None):
    """
    Computes MPJPE over 6890 surface vertices.
    Args:
        verts_gt (Nx6890x3).
        verts_pred (Nx6890x3).
    Returns:
        error_verts (N).
    """

    if target_verts is None:
        from lib.models.smpl import SMPL_MODEL_DIR
        from lib.models.smpl import SMPL
        device = 'cpu'
        smpl = SMPL(
            SMPL_MODEL_DIR,
            batch_size=1, # target_theta.shape[0],
        ).to(device)

        betas = torch.from_numpy(target_theta[:,75:]).to(device)
        pose = torch.from_numpy(target_theta[:,3:75]).to(device)

        target_verts = []
        b_ = torch.split(betas, 5000)
        p_ = torch.split(pose, 5000)

        for b,p in zip(b_,p_):
            output = smpl(betas=b, body_pose=p[:, 3:], global_orient=p[:, :3], pose2rot=True)
            target_verts.append(output.vertices.detach().cpu().numpy())

        target_verts = np.concatenate(target_verts, axis=0)

    assert len(pred_verts) == len(target_verts)
    error_per_vert = np.sqrt(np.sum((target_verts - pred_verts) ** 2, axis=2))
    return np.mean(error_per_vert, axis=1)


def compute_similarity_transform(S1, S2):
    '''
    Computes a similarity transform (sR, t) that takes
    a set of 3D points S1 (3 x N) closest to a set of 3D points S2,
    where R is an 3x3 rotation matrix, t 3x1 translation, s scale.
    i.e. solves the orthogonal Procrutes problem.
    '''
    transposed = False
    if S1.shape[0] != 3 and S1.shape[0] != 2:
        S1 = S1.T
        S2 = S2.T
        transposed = True
    assert(S2.shape[1] == S1.shape[1])

    # 1. Remove mean.
    mu1 = S1.mean(axis=1, keepdims=True)
    mu2 = S2.mean(axis=1, keepdims=True)
    X1 = S1 - mu1
    X2 = S2 - mu2

    # 2. Compute variance of X1 used for scale.
    var1 = np.sum(X1**2)

    # 3. The outer product of X1 and X2.
    K = X1.dot(X2.T)

    # 4. Solution that Maximizes trace(R'K) is R=U*V', where U, V are
    # singular vectors of K.
    U, s, Vh = np.linalg.svd(K)
    V = Vh.T
    # Construct Z that fixes the orientation of R to get det(R)=1.
    Z = np.eye(U.shape[0])
    Z[-1, -1] *= np.sign(np.linalg.det(U.dot(V.T)))
    # Construct R.
    R = V.dot(Z.dot(U.T))

    # 5. Recover scale.
    scale = np.trace(R.dot(K)) / var1

    # 6. Recover translation.
    t = mu2 - scale*(R.dot(mu1))

    # 7. Error:
    S1_hat = scale*R.dot(S1) + t

    if transposed:
        S1_hat = S1_hat.T

    return S1_hat


def compute_similarity_transform_torch(S1, S2):
    '''
    Computes a similarity transform (sR, t) that takes
    a set of 3D points S1 (3 x N) closest to a set of 3D points S2,
    where R is an 3x3 rotation matrix, t 3x1 translation, s scale.
    i.e. solves the orthogonal Procrutes problem.
    '''
    transposed = False
    if S1.shape[0] != 3 and S1.shape[0] != 2:
        S1 = S1.T
        S2 = S2.T
        transposed = True
    assert (S2.shape[1] == S1.shape[1])

    # 1. Remove mean.
    mu1 = S1.mean(axis=1, keepdims=True)
    mu2 = S2.mean(axis=1, keepdims=True)
    X1 = S1 - mu1
    X2 = S2 - mu2

    # print('X1', X1.shape)

    # 2. Compute variance of X1 used for scale.
    var1 = torch.sum(X1 ** 2)

    # print('var', var1.shape)

    # 3. The outer product of X1 and X2.
    K = X1.mm(X2.T)

    # 4. Solution that Maximizes trace(R'K) is R=U*V', where U, V are
    # singular vectors of K.
    U, s, V = torch.svd(K)
    # V = Vh.T
    # Construct Z that fixes the orientation of R to get det(R)=1.
    Z = torch.eye(U.shape[0], device=S1.device)
    Z[-1, -1] *= torch.sign(torch.det(U @ V.T))
    # Construct R.
    R = V.mm(Z.mm(U.T))

    # print('R', X1.shape)

    # 5. Recover scale.
    scale = torch.trace(R.mm(K)) / var1
    # print(R.shape, mu1.shape)
    # 6. Recover translation.
    t = mu2 - scale * (R.mm(mu1))
    # print(t.shape)

    # 7. Error:
    S1_hat = scale * R.mm(S1) + t

    if transposed:
        S1_hat = S1_hat.T

    return S1_hat


def batch_compute_similarity_transform_torch(S1, S2):
    '''
    Computes a similarity transform (sR, t) that takes
    a set of 3D points S1 (3 x N) closest to a set of 3D points S2,
    where R is an 3x3 rotation matrix, t 3x1 translation, s scale.
    i.e. solves the orthogonal Procrutes problem.
    '''
    transposed = False
    if S1.shape[0] != 3 and S1.shape[0] != 2:
        S1 = S1.permute(0,2,1)
        S2 = S2.permute(0,2,1)
        transposed = True
    assert(S2.shape[1] == S1.shape[1])

    # 1. Remove mean.
    mu1 = S1.mean(axis=-1, keepdims=True)
    mu2 = S2.mean(axis=-1, keepdims=True)

    X1 = S1 - mu1
    X2 = S2 - mu2

    # 2. Compute variance of X1 used for scale.
    var1 = torch.sum(X1**2, dim=1).sum(dim=1)

    # 3. The outer product of X1 and X2.
    K = X1.bmm(X2.permute(0,2,1))

    # 4. Solution that Maximizes trace(R'K) is R=U*V', where U, V are
    # singular vectors of K.
    U, s, V = torch.svd(K)

    # Construct Z that fixes the orientation of R to get det(R)=1.
    Z = torch.eye(U.shape[1], device=S1.device).unsqueeze(0)
    Z = Z.repeat(U.shape[0],1,1)
    Z[:,-1, -1] *= torch.sign(torch.det(U.bmm(V.permute(0,2,1))))

    # Construct R.
    R = V.bmm(Z.bmm(U.permute(0,2,1)))

    # 5. Recover scale.
    scale = torch.cat([torch.trace(x).unsqueeze(0) for x in R.bmm(K)]) / var1

    # 6. Recover translation.
    t = mu2 - (scale.unsqueeze(-1).unsqueeze(-1) * (R.bmm(mu1)))

    # 7. Error:
    S1_hat = scale.unsqueeze(-1).unsqueeze(-1) * R.bmm(S1) + t

    if transposed:
        S1_hat = S1_hat.permute(0,2,1)

    return S1_hat


def align_by_pelvis(joints):
    """
    Assumes joints is 14 x 3 in LSP order.
    Then hips are: [3, 2]
    Takes mid point of these points, then subtracts it.
    """

    left_id = 2
    right_id = 3

    pelvis = (joints[left_id, :] + joints[right_id, :]) / 2.0
    return joints - np.expand_dims(pelvis, axis=0)


def compute_errors(gt3ds, preds):
    """
    Gets MPJPE after pelvis alignment + MPJPE after Procrustes.
    Evaluates on the 14 common joints.
    Inputs:
      - gt3ds: N x 14 x 3
      - preds: N x 14 x 3
    """
    errors, errors_pa = [], []
    for i, (gt3d, pred) in enumerate(zip(gt3ds, preds)):
        gt3d = gt3d.reshape(-1, 3)
        # Root align.
        gt3d = align_by_pelvis(gt3d)
        pred3d = align_by_pelvis(pred)

        joint_error = np.sqrt(np.sum((gt3d - pred3d)**2, axis=1))
        errors.append(np.mean(joint_error))

        # Get PA error.
        pred3d_sym = compute_similarity_transform(pred3d, gt3d)
        pa_error = np.sqrt(np.sum((gt3d - pred3d_sym)**2, axis=1))
        errors_pa.append(np.mean(pa_error))

    return errors, errors_pa


def batch_align_by_pelvis(data_list, pelvis_idxs):
    """
    Assumes data is given as [pred_j3d, target_j3d, pred_verts, target_verts].
    Each data is in shape of (frames, num_points, 3)
    Pelvis is notated as one / two joints indices.
    Align all data to the corresponding pelvis location.
    """

    pred_j3d, target_j3d, pred_verts, target_verts = data_list
    
    pred_pelvis = pred_j3d[:, pelvis_idxs].mean(dim=1, keepdims=True).clone()
    target_pelvis = target_j3d[:, pelvis_idxs].mean(dim=1, keepdims=True).clone()
    
    # Align to the pelvis
    pred_j3d = pred_j3d - pred_pelvis
    target_j3d = target_j3d - target_pelvis
    pred_verts = pred_verts - pred_pelvis
    target_verts = target_verts - target_pelvis
    
    return (pred_j3d, target_j3d, pred_verts, target_verts)

def compute_jpe(S1, S2):
    return torch.sqrt(((S1 - S2) ** 2).sum(dim=-1)).mean(dim=-1).numpy()


# The functions below are borrowed from SLAHMR official implementation.
# Reference: https://github.com/vye16/slahmr/blob/main/slahmr/eval/tools.py
def global_align_joints(gt_joints, pred_joints):
    """
    :param gt_joints (T, J, 3)
    :param pred_joints (T, J, 3)
    """
    s_glob, R_glob, t_glob = align_pcl(
        gt_joints.reshape(-1, 3), pred_joints.reshape(-1, 3)
    )
    pred_glob = (
        s_glob * torch.einsum("ij,tnj->tni", R_glob, pred_joints) + t_glob[None, None]
    )
    return pred_glob


def first_align_joints(gt_joints, pred_joints):
    """
    align the first two frames
    :param gt_joints (T, J, 3)
    :param pred_joints (T, J, 3)
    """
    # (1, 1), (1, 3, 3), (1, 3)
    s_first, R_first, t_first = align_pcl(
        gt_joints[:2].reshape(1, -1, 3), pred_joints[:2].reshape(1, -1, 3)
    )
    pred_first = (
        s_first * torch.einsum("tij,tnj->tni", R_first, pred_joints) + t_first[:, None]
    )
    return pred_first


def local_align_joints(gt_joints, pred_joints):
    """
    :param gt_joints (T, J, 3)
    :param pred_joints (T, J, 3)
    """
    s_loc, R_loc, t_loc = align_pcl(gt_joints, pred_joints)
    pred_loc = (
        s_loc[:, None] * torch.einsum("tij,tnj->tni", R_loc, pred_joints)
        + t_loc[:, None]
    )
    return pred_loc


def align_pcl(Y, X, weight=None, fixed_scale=False):
    """align similarity transform to align X with Y using umeyama method
    X' = s * R * X + t is aligned with Y
    :param Y (*, N, 3) first trajectory
    :param X (*, N, 3) second trajectory
    :param weight (*, N, 1) optional weight of valid correspondences
    :returns s (*, 1), R (*, 3, 3), t (*, 3)
    """
    *dims, N, _ = Y.shape
    N = torch.ones(*dims, 1, 1) * N

    if weight is not None:
        Y = Y * weight
        X = X * weight
        N = weight.sum(dim=-2, keepdim=True)  # (*, 1, 1)

    # subtract mean
    my = Y.sum(dim=-2) / N[..., 0]  # (*, 3)
    mx = X.sum(dim=-2) / N[..., 0]
    y0 = Y - my[..., None, :]  # (*, N, 3)
    x0 = X - mx[..., None, :]

    if weight is not None:
        y0 = y0 * weight
        x0 = x0 * weight

    # correlation
    C = torch.matmul(y0.transpose(-1, -2), x0) / N  # (*, 3, 3)
    U, D, Vh = torch.linalg.svd(C)  # (*, 3, 3), (*, 3), (*, 3, 3)

    S = torch.eye(3).reshape(*(1,) * (len(dims)), 3, 3).repeat(*dims, 1, 1)
    neg = torch.det(U) * torch.det(Vh.transpose(-1, -2)) < 0
    S[neg, 2, 2] = -1

    R = torch.matmul(U, torch.matmul(S, Vh))  # (*, 3, 3)

    D = torch.diag_embed(D)  # (*, 3, 3)
    if fixed_scale:
        s = torch.ones(*dims, 1, device=Y.device, dtype=torch.float32)
    else:
        var = torch.sum(torch.square(x0), dim=(-1, -2), keepdim=True) / N  # (*, 1, 1)
        s = (
            torch.diagonal(torch.matmul(D, S), dim1=-2, dim2=-1).sum(
                dim=-1, keepdim=True
            )
            / var[..., 0]
        )  # (*, 1)

    t = my - s * torch.matmul(R, mx[..., None])[..., 0]  # (*, 3)

    return s, R, t


def compute_foot_sliding(target_output, pred_output, masks, thr=1e-2):
    """compute foot sliding error
    The foot ground contact label is computed by the threshold of 1 cm/frame
    Args:
        target_output (SMPL ModelOutput).
        pred_output (SMPL ModelOutput).
        masks (N).
    Returns:
        error (N frames in contact).
    """
    
    # Foot vertices idxs
    foot_idxs = [3216, 3387, 6617, 6787]
    
    # Compute contact label
    foot_loc = target_output.vertices[masks][:, foot_idxs]
    foot_disp = (foot_loc[1:] - foot_loc[:-1]).norm(2, dim=-1)
    contact = foot_disp[:] < thr
    
    pred_feet_loc = pred_output.vertices[:, foot_idxs]
    pred_disp = (pred_feet_loc[1:] - pred_feet_loc[:-1]).norm(2, dim=-1)
    
    error = pred_disp[contact]
    
    return error.cpu().numpy()


def compute_jitter(pred_output, fps=30):
    """compute jitter of the motion
    Args:
        pred_output (SMPL ModelOutput).
        fps (float).
    Returns:
        jitter (N-3).
    """
    
    pred3d = pred_output.joints[:, :24]
        
    pred_jitter = torch.norm(
        (pred3d[3:] - 3 * pred3d[2:-1] + 3 * pred3d[1:-2] - pred3d[:-3]) * (fps**3),
        dim=2,
    ).mean(dim=-1)
    
    return pred_jitter.cpu().numpy() / 10.0


def compute_rte(target_trans, pred_trans):
    # Compute the global alignment
    _, rot, trans = align_pcl(target_trans[None, :], pred_trans[None, :], fixed_scale=True)
    pred_trans_hat = (
        torch.einsum("tij,tnj->tni", rot, pred_trans[None, :]) + trans[None, :]
    )[0]
    
    # Compute the entire displacement of ground truth trajectory
    disps, disp = [], 0
    for p1, p2 in zip(target_trans, target_trans[1:]):
        delta = (p2 - p1).norm(2, dim=-1)
        disp += delta
        disps.append(disp)
    
    # Compute absolute root-translation-error (RTE)
    rte = torch.norm(target_trans - pred_trans_hat, 2, dim=-1)
    
    # Normalize it to the displacement
    return (rte / disp).numpy()