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Running on Zero
Running on Zero
Francesco commited on
Commit ·
7a2ca4b
1
Parent(s): ed9fa70
Updated app.py
Browse files
app.py
CHANGED
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@@ -31,8 +31,12 @@ def run_nnunet_predict(nifti_file):
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os.makedirs(OUTPUT_DIR, exist_ok=True)
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# Save the uploaded file to the input directory
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input_path = os.path.join(INPUT_DIR, "
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os.rename(nifti_file.name, input_path) # Move the uploaded file to the expected input location
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# Set environment variables for nnUNet
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os.environ["nnUNet_results"] = MODEL_DIR
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os.makedirs(OUTPUT_DIR, exist_ok=True)
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# Save the uploaded file to the input directory
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input_path = os.path.join(INPUT_DIR, "image_0000.nii.gz")
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os.rename(nifti_file.name, input_path) # Move the uploaded file to the expected input location
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# Debugging: List files in the /tmp/input directory
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print("Files in /tmp/input:")
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print(os.listdir(INPUT_DIR))
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# Set environment variables for nnUNet
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os.environ["nnUNet_results"] = MODEL_DIR
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