Spaces:
Sleeping
Sleeping
Update app.py
Browse files
app.py
CHANGED
|
@@ -36,18 +36,18 @@ def run_deep_learning_cascade(dna_sequence):
|
|
| 36 |
clf_coding = joblib.load("coding_classifier_universal.joblib")
|
| 37 |
|
| 38 |
tokenizer_base = AutoTokenizer.from_pretrained("DNABERT_Local", trust_remote_code=True)
|
| 39 |
-
model_base = AutoModel.from_pretrained("DNABERT_Local", trust_remote_code=True).to(device)
|
| 40 |
model_base.eval()
|
| 41 |
|
| 42 |
tokenizer_promoter = AutoTokenizer.from_pretrained("llm_promoter_classifier_v2", trust_remote_code=True)
|
| 43 |
-
model_promoter = AutoModelForSequenceClassification.from_pretrained("llm_promoter_classifier_v2", trust_remote_code=True).to(device)
|
| 44 |
model_promoter.eval()
|
| 45 |
|
| 46 |
lgbm_path = hf_hub_download(repo_id="Geonomic/Genomic-Oracle-Weights", filename="dnabert_lightgbm_model_feature_type.pkl")
|
| 47 |
lightgbm_model = joblib.load(lgbm_path)
|
| 48 |
|
| 49 |
tokenizer_pheno = AutoTokenizer.from_pretrained("Geonomic/Genomic-Oracle-Weights", trust_remote_code=True)
|
| 50 |
-
model_pheno = AutoModelForSequenceClassification.from_pretrained("Geonomic/Genomic-Oracle-Weights", trust_remote_code=True).to(device)
|
| 51 |
model_pheno.eval()
|
| 52 |
|
| 53 |
# --- LEVEL 1: Base Embedding & Kadir's Gatekeeper ---
|
|
|
|
| 36 |
clf_coding = joblib.load("coding_classifier_universal.joblib")
|
| 37 |
|
| 38 |
tokenizer_base = AutoTokenizer.from_pretrained("DNABERT_Local", trust_remote_code=True)
|
| 39 |
+
model_base = AutoModel.from_pretrained("DNABERT_Local", trust_remote_code=True, low_cpu_mem_usage=False).to(device)
|
| 40 |
model_base.eval()
|
| 41 |
|
| 42 |
tokenizer_promoter = AutoTokenizer.from_pretrained("llm_promoter_classifier_v2", trust_remote_code=True)
|
| 43 |
+
model_promoter = AutoModelForSequenceClassification.from_pretrained("llm_promoter_classifier_v2", trust_remote_code=True, low_cpu_mem_usage=False).to(device)
|
| 44 |
model_promoter.eval()
|
| 45 |
|
| 46 |
lgbm_path = hf_hub_download(repo_id="Geonomic/Genomic-Oracle-Weights", filename="dnabert_lightgbm_model_feature_type.pkl")
|
| 47 |
lightgbm_model = joblib.load(lgbm_path)
|
| 48 |
|
| 49 |
tokenizer_pheno = AutoTokenizer.from_pretrained("Geonomic/Genomic-Oracle-Weights", trust_remote_code=True)
|
| 50 |
+
model_pheno = AutoModelForSequenceClassification.from_pretrained("Geonomic/Genomic-Oracle-Weights", trust_remote_code=True, low_cpu_mem_usage=False).to(device)
|
| 51 |
model_pheno.eval()
|
| 52 |
|
| 53 |
# --- LEVEL 1: Base Embedding & Kadir's Gatekeeper ---
|