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first commit
Browse files- app.py +74 -0
- efficientnet_mri_model.pth +3 -0
- model.py +22 -0
- requirements.txt +3 -0
app.py
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import gradio as gr
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import os
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import torch
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from demos.model import create_model
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from timeit import default_timer as timer
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# Setup Class Names
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class_names = [
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"glioma",
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"meningioma",
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"notumor",
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"pituitary"
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]
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# Create efficientnet model
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efficient_model, transforms = create_model(num_classes=len(class_names))
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# Load saved weights for MRI classifier
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state_dict = torch.load(
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f="/content/demos/efficientnet_mri_model.pth",
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weights_only=False,
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map_location="cpu"
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)
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efficient_model.load_state_dict(state_dict())
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def predict_img(img):
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# Start Timer
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start_time = timer()
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# Transform image and add extra dimension
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img = transforms(img).unsqueeze(0)
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# Put the model on eval and inference mode
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efficient_model.eval()
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with torch.inference_mode():
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# Pass the transformed image through the model.
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pred_probs = torch.softmax(efficient_model(img), dim=1)
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# Pred Labels and Probabilities required in gradio format
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pred_labels_and_probs = {class_names[i] : float(pred_probs[0][i]) for i in range(len(class_names))}
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# Calculate the total time
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pred_time = round(timer() - start_time, 5)
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return pred_labels_and_probs, pred_time
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# Ddfine the title, desc and article
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title = "Dr. Gerry MRI result classified"
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desc = "An Efficientnet model feature extractor to classify MRI images"
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article = "Created @ Mauaque Resettlement Center Gonzales Compound"
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# Create example list
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path_list = '/content/demos/examples'
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example_list = os.listdir(path_list)
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# Initialized Gradio Demo
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demo = gr.Interface(
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fn=predict_img,
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inputs=gr.Image(type="pil"),
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outputs=[gr.Label(num_top_classes=4,label="Predictions"),
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gr.Number(label="Prediction's time")],
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examples=example_list,
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title=title,
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description=desc,
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article=article
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)
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demo.launch()
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efficientnet_mri_model.pth
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version https://git-lfs.github.com/spec/v1
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oid sha256:0fbe8aef55563e04f1af41ee2e66ea3d13b7f3ad108823c73a35310392c2722b
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size 31365477
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model.py
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import torchvision
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import torch
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def create_model(
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num_classes: int=4,
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seed: int=42):
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weights = torchvision.models.EfficientNet_B2_Weights.DEFAULT
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transform = weights.transforms()
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model = torchvision.models.efficientnet_b2(weights=weights).to("cpu")
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for params in model.parameters():
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params.requires_grad = False
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model.classifier = torch.nn.Sequential(
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torch.nn.Dropout(p=0.2,inplace=True),
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torch.nn.Linear(1408,num_classes)
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)
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return model, transform
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requirements.txt
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torch==2.10.0
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torchvision==0.25.0
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gradio==5.50.0
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