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Runtime error
Runtime error
Fix filtfilt padlen for 0.3Hz gravity filter, default 9-sample pad inadequate, use max safe pad
Browse files- src/phyphox_pipeline.py +5 -2
src/phyphox_pipeline.py
CHANGED
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@@ -83,10 +83,13 @@ def _butter_lp(data: np.ndarray, cutoff: float, fs: float = FS, order: int = 3)
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Filtered array, same shape as input
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"""
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b, a = sp_signal.butter(order, cutoff / (fs / 2.0), btype="low")
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if data.ndim == 1:
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return sp_signal.filtfilt(b, a, data)
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return np.column_stack(
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[sp_signal.filtfilt(b, a, data[:, i]) for i in range(data.shape[1])]
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)
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Filtered array, same shape as input
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"""
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b, a = sp_signal.butter(order, cutoff / (fs / 2.0), btype="low")
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# Use maximum safe padding — critical for low cutoffs (e.g. 0.3 Hz needs
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# ~167 samples to settle; scipy's default 9-sample pad is far too short).
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padlen = min(len(data) - 1, max(3 * int(fs / cutoff), 9))
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if data.ndim == 1:
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return sp_signal.filtfilt(b, a, data, padlen=padlen)
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return np.column_stack(
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[sp_signal.filtfilt(b, a, data[:, i], padlen=padlen) for i in range(data.shape[1])]
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)
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