Update code/add_3Dalignment.py

code/add_3Dalignment.py

@@ -215,9 +215,11 @@ def get_coords(annot, alignments, coords, resnums_for_sasa, mode):
 
 
 def get_alignments_3D(identifier, model_num, pdbSequence, source, chain, pdbID, mode,file_format = 'gzip'):
+    print('In Function')
     pdbSequence = convert_non_standard_amino_acids(pdbSequence)
     if mode == 1:
         if source != 'MODBASE':
+            print('I am here')
             # Step 1: Fetch the PDB file
             pdb_url = f"https://files.rcsb.org/download/{pdbID}.pdb"
             response = requests.get(pdb_url)