Update code/alphafold_featureVector.py

code/alphafold_featureVector.py

@@ -718,13 +718,13 @@ def alphafold(input_set, mode, impute):
                                             st.write('WHY 2')
                                             residue = str(k.split(' ')[1].strip())
                                             st.write('k', k)
-                                            st.write(k.split(' '))
-                                            st.write(str(k.split(' ')[5]).strip('\n'))
+                                            st.write(list(filter(None,k.split(' '))))
+                                            st.write(list(filter(None,k.split(' ')))[5])
                                             if wt == threeToOne(residue):
-                                                sasa = str(k.split(' ')[5]).strip('\n')
+                                                sasa = str(list(filter(None,k.split(' ')))).strip('\n')
                                             elif wt != threeToOne(residue):
                                                 st.write(k)
-                                                sasa = str(k.split(' ')[5]).strip('\n') + '*'
+                                                sasa = str(list(filter(None,k.split(' ')))).strip('\n') + '*'
                                             else:
                                                 sasa = 'nan'