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Update trainer.py
Browse files- trainer.py +4 -1
trainer.py
CHANGED
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@@ -733,7 +733,10 @@ class Trainer(object):
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self.G2.load_state_dict(torch.load(G2_path, map_location=lambda storage, loc: storage))
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drug_mols = [Chem.MolFromSmiles(smi) for smi in drug_smiles]
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drug_scaf = [MurckoScaffold.GetScaffoldForMol(x) for x in drug_mols]
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self.G2.load_state_dict(torch.load(G2_path, map_location=lambda storage, loc: storage))
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if self.submodel == "NoTarget":
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drug_smiles = [line for line in open("DrugGEN/data/chembl_test.smi", 'r').read().splitlines()]
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else:
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drug_smiles = [line for line in open("DrugGEN/data/akt_test.smi", 'r').read().splitlines()]
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drug_mols = [Chem.MolFromSmiles(smi) for smi in drug_smiles]
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drug_scaf = [MurckoScaffold.GetScaffoldForMol(x) for x in drug_mols]
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