HeshamAI commited on
Commit
200d335
·
verified ·
1 Parent(s): 2100b47

Update app.py

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Files changed (1) hide show
  1. app.py +5 -92
app.py CHANGED
@@ -97,82 +97,6 @@ class DicomAnalyzer:
97
  print(f"Error drawing circle: {str(e)}")
98
  return image
99
 
100
- def process_image1(self, file):
101
- image, image_display, dicom_data = self.load_dicom(file)
102
- self.current_image1 = image
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- self.image_display1 = image_display
104
- self.dicom_data1 = dicom_data
105
- return image_display
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-
107
- def process_image2(self, file):
108
- image, image_display, dicom_data = self.load_dicom(file)
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- self.current_image2 = image
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- self.image_display2 = image_display
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- self.dicom_data2 = dicom_data
112
- return image_display
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-
114
- def handle_click(self, evt: gr.SelectData, is_image1=True):
115
- if is_image1 and self.current_image1 is None:
116
- return self.image_display1, "Please load Image 1 first"
117
- elif not is_image1 and self.current_image2 is None:
118
- return self.image_display2, "Please load Image 2 first"
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-
120
- try:
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- x, y = evt.index
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- if is_image1:
123
- marked_image = self.draw_circle(self.image_display1, x, y, is_image1=True)
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- self.image_display1 = marked_image
125
- results = self.analyze_point(self.current_image1, self.dicom_data1, x, y)
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- else:
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- marked_image = self.draw_circle(self.image_display2, x, y, is_image1=False)
128
- self.image_display2 = marked_image
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- results = self.analyze_point(self.current_image2, self.dicom_data2, x, y)
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-
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- if results:
132
- results['Image'] = "Image 1" if is_image1 else "Image 2"
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- results['Point'] = f"({x}, {y})"
134
- self.results.append(results)
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-
136
- return marked_image, self.format_results()
137
- except Exception as e:
138
- print(f"Error in handle_click: {str(e)}")
139
- return (self.image_display1 if is_image1 else self.image_display2), f"Error: {str(e)}"
140
-
141
- def format_results(self):
142
- if not self.results:
143
- return "No results yet"
144
- df = pd.DataFrame(self.results)
145
- return df.to_string()
146
-
147
- def clear_results(self):
148
- self.results = []
149
- self.marks1 = []
150
- self.marks2 = []
151
- if self.current_image1 is not None:
152
- self.image_display1 = cv2.cvtColor(
153
- cv2.normalize(self.current_image1, None, 0, 255, cv2.NORM_MINMAX).astype(np.uint8),
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- cv2.COLOR_GRAY2BGR
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- )
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- if self.current_image2 is not None:
157
- self.image_display2 = cv2.cvtColor(
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- cv2.normalize(self.current_image2, None, 0, 255, cv2.NORM_MINMAX).astype(np.uint8),
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- cv2.COLOR_GRAY2BGR
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- )
161
- return "Results cleared", self.image_display1, self.image_display2
162
-
163
- def save_results(self):
164
- try:
165
- if not self.results:
166
- return None, "No results to save"
167
-
168
- df = pd.DataFrame(self.results)
169
- temp_file = os.path.join(tempfile.gettempdir(), "analysis_results.xlsx")
170
- df.to_excel(temp_file, index=False, engine='openpyxl')
171
- return temp_file, "Results saved successfully. Click to download."
172
- except Exception as e:
173
- print(f"Error saving results: {str(e)}")
174
- return None, f"Error saving results: {str(e)}"
175
-
176
  def update_circle_diameter(self, value):
177
  self.circle_diameter = value
178
  return f"Circle diameter set to {value}"
@@ -184,25 +108,14 @@ def create_interface():
184
  gr.Markdown("# CT DICOM Image Analyzer")
185
 
186
  with gr.Row():
187
- file1 = gr.File(label="Upload first DICOM file")
188
- image1 = gr.Image(label="Image 1", interactive=True, type="numpy")
189
- file1.change(fn=analyzer.process_image1, inputs=file1, outputs=image1)
190
-
191
- file2 = gr.File(label="Upload second DICOM file")
192
- image2 = gr.Image(label="Image 2", interactive=True, type="numpy")
193
- file2.change(fn=analyzer.process_image2, inputs=file2, outputs=image2)
194
 
195
  circle_diameter = gr.Slider(minimum=1, maximum=20, value=9, step=1, label="Circle Diameter")
196
- circle_diameter.change(fn=analyzer.update_circle_diameter, inputs=circle_diameter, outputs="status")
197
-
198
- results = gr.Textbox(label="Results", interactive=False)
199
- clear_btn = gr.Button("Clear Results")
200
- save_btn = gr.Button("Save Results")
201
 
202
- image1.select(fn=lambda evt: analyzer.handle_click(evt, is_image1=True), outputs=[image1, results])
203
- image2.select(fn=lambda evt: analyzer.handle_click(evt, is_image1=False), outputs=[image2, results])
204
- clear_btn.click(fn=analyzer.clear_results, outputs=[results, image1, image2])
205
- save_btn.click(fn=analyzer.save_results, outputs=["file", results])
206
 
207
  return interface
208
 
 
97
  print(f"Error drawing circle: {str(e)}")
98
  return image
99
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
100
  def update_circle_diameter(self, value):
101
  self.circle_diameter = value
102
  return f"Circle diameter set to {value}"
 
108
  gr.Markdown("# CT DICOM Image Analyzer")
109
 
110
  with gr.Row():
111
+ file1 = gr.File(label="Upload DICOM file")
112
+ image1 = gr.Image(label="DICOM Image", interactive=True, type="numpy")
113
+ file1.change(fn=analyzer.load_dicom, inputs=file1, outputs=image1)
 
 
 
 
114
 
115
  circle_diameter = gr.Slider(minimum=1, maximum=20, value=9, step=1, label="Circle Diameter")
116
+ status = gr.Textbox(label="Status", interactive=False)
 
 
 
 
117
 
118
+ circle_diameter.change(fn=analyzer.update_circle_diameter, inputs=circle_diameter, outputs=status)
 
 
 
119
 
120
  return interface
121