Update app.py
Browse files
app.py
CHANGED
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@@ -324,8 +324,6 @@ class DicomAnalyzer:
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def add_formulas_to_template(self, ws, row_pair, col_group, red_font):
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"""
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Inserts SNR (first row) and CNR (second row) formulas with IFERROR.
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SNR => row1
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CNR => row2
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"""
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try:
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base_col = col_group[1] # Mean column
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@@ -333,7 +331,7 @@ class DicomAnalyzer:
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row1, row2 = row_pair
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# SNR formula
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formula1 = f"=IFERROR({base_col}{row1}/{std_col}{row1},\"\")"
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formula_col = get_column_letter(column_index_from_string(col_group[-1]) + 1)
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cell1 = ws[f"{formula_col}{row1}"]
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@@ -341,7 +339,7 @@ class DicomAnalyzer:
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cell1.font = red_font
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cell1.alignment = openpyxl.styles.Alignment(horizontal='center')
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# CNR formula
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formula2 = f"=IFERROR(({base_col}{row1}-{base_col}{row2})/{std_col}{row2},\"\")"
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cell2 = ws[f"{formula_col}{row2}"]
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cell2.value = formula2
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@@ -352,11 +350,15 @@ class DicomAnalyzer:
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except Exception as e:
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logger.error(f"Error adding formulas: {str(e)}")
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def save_formatted_results(self, output_path):
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try:
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if not self.results:
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return None, "No results to save"
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wb = openpyxl.Workbook()
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ws = wb.active
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red_font = openpyxl.styles.Font(color="FF0000")
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@@ -373,32 +375,29 @@ class DicomAnalyzer:
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('BV', 'BW', 'BX', 'BY', 'BZ')
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]
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# Write main headers in each column group
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for cols in column_groups:
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for i, header in enumerate(headers):
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cell = ws[f"{cols[i]}1"]
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cell.value = header
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cell.alignment = center_alignment
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# Pairs of rows for measurements
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row_pairs = [
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(2, 3), (5, 6), (8, 9), (11, 12), (14, 15),
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(17, 18), (20, 21), (23, 24), (26, 27), (29, 30)
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]
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# Phantom sizes (used for labeling)
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phantom_sizes = [
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'(7mm)', '(6.5mm)', '(6mm)', '(5.5mm)', '(5mm)',
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'(4.5mm)', '(4mm)', '(3.5mm)', '(3mm)', '(2.5mm)'
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]
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#
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for i, size in enumerate(phantom_sizes):
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header_cell = ws.cell(row=row_pairs[i][0]-1, column=1, value=size)
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header_cell.font = red_font
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header_cell.alignment = center_alignment
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#
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result_idx = 0
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current_col_group = 0
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current_row_pair = 0
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@@ -420,7 +419,6 @@ class DicomAnalyzer:
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self._write_result_to_cells(ws, result, cols, rows[1])
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result_idx += 1
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# Add SNR/CNR formulas for these two rows
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self.add_formulas_to_template(ws, rows, cols, red_font)
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current_col_group += 1
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@@ -428,7 +426,7 @@ class DicomAnalyzer:
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current_col_group = 0
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current_row_pair += 1
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#
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for cols in column_groups:
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for col in cols:
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for row in range(2, 31):
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@@ -436,16 +434,24 @@ class DicomAnalyzer:
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if cell.value is not None:
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cell.alignment = center_alignment
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-
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start_row = 35
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ws['C35'] = "1-AVG"
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ws['C35'].alignment = center_alignment
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#
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ws.merge_cells('D35:E35')
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ws.merge_cells('F35:G35')
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ws.merge_cells('H35:I35')
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avg_headers = {
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'D35': 'AVG MEAN',
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'F35': 'AVG STDDEV',
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@@ -456,74 +462,81 @@ class DicomAnalyzer:
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ws[c_ref].font = red_font
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ws[c_ref].alignment = center_alignment
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#
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phantom_sizes2 = [
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'(7.0mm)', '(6.5mm)', '(6.0mm)', '(5.5mm)', '(5.0mm)',
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'(4.5mm)', '(4.0mm)', '(3.5mm)', '(3.0mm)', '(2.5mm)'
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]
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# For each phantom row, read the same row_pairs to gather data
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for i, p_size in enumerate(phantom_sizes2):
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row = start_row + i + 1 # 36..45
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#
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ws.merge_cells(f'D{row}:E{row}')
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ws.merge_cells(f'F{row}:G{row}')
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ws.merge_cells(f'H{row}:I{row}')
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size_cell = ws[f'C{row}']
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size_cell.value = p_size
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size_cell.font = red_font
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size_cell.alignment = center_alignment
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if i < len(row_pairs):
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(raw_row1, raw_row2) = row_pairs[i]
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else:
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continue
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mean_values = []
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stddev_values = []
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cnr_values = []
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#
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# But now for CNR, we'll read from the formula column (the one add_formulas_to_template uses).
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for group in column_groups:
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mean_col = group[1] #
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std_col = group[2] #
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# For MEAN, let's read row1 as before
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val_mean = ws[f"{mean_col}{raw_row1}"].value
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# For STDDEV, also row1 if you prefer
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val_std = ws[f"{std_col}{raw_row1}"].value
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# For CNR, the formula is placed in row2 in the "formula column" after group[-1].
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# So let's find that column letter:
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formula_col_index = column_index_from_string(group[-1]) + 1
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formula_col = get_column_letter(formula_col_index)
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#
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# Convert them to float if possible
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try:
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except:
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-
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stddev_values.append(val_std)
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if val_cnr is not None:
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cnr_values.append(val_cnr)
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#
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if final_mean is not None:
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ws[f'D{row}'].value = final_mean
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ws[f'D{row}'].alignment = center_alignment
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ws[f'H{row}'].alignment = center_alignment
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ws[f'H{row}'].number_format = '0.0000'
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-
#
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thin_side = openpyxl.styles.Side(style='thin')
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border = openpyxl.styles.Border(
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left=thin_side, right=thin_side, top=thin_side, bottom=thin_side
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@@ -553,6 +566,7 @@ class DicomAnalyzer:
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except Exception as e:
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logger.error(f"Error saving formatted results: {str(e)}")
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return None, f"Error saving results: {str(e)}"
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def _write_result_to_cells(self, ws, result, cols, row):
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center_alignment = openpyxl.styles.Alignment(horizontal='center')
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return image, self.format_results()
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def undo_last(self, image):
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if not self.results: #
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return self.update_display(), self.format_results()
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last_result = self.results[-1]
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is_measurement = last_result['Point'] != '(0, 0)'
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self.results.pop()
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if is_measurement and self.marks:
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self.marks.pop()
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def add_formulas_to_template(self, ws, row_pair, col_group, red_font):
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"""
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Inserts SNR (first row) and CNR (second row) formulas with IFERROR.
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"""
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try:
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base_col = col_group[1] # Mean column
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row1, row2 = row_pair
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# SNR formula
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formula1 = f"=IFERROR({base_col}{row1}/{std_col}{row1},\"\")"
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formula_col = get_column_letter(column_index_from_string(col_group[-1]) + 1)
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cell1 = ws[f"{formula_col}{row1}"]
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cell1.font = red_font
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cell1.alignment = openpyxl.styles.Alignment(horizontal='center')
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# CNR formula
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formula2 = f"=IFERROR(({base_col}{row1}-{base_col}{row2})/{std_col}{row2},\"\")"
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cell2 = ws[f"{formula_col}{row2}"]
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cell2.value = formula2
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except Exception as e:
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logger.error(f"Error adding formulas: {str(e)}")
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########################################################################
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# نفس الدالة الأصلية، لكن نهاية الدالة تضع الجدول في الصف 35 بالشكل المطلوب
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########################################################################
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def save_formatted_results(self, output_path):
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try:
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if not self.results:
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return None, "No results to save"
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# هنا كل شيء مثل كودك: تنشئ Workbook جديد، تصنع الشيت، تضع الهيدرز...
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wb = openpyxl.Workbook()
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ws = wb.active
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red_font = openpyxl.styles.Font(color="FF0000")
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('BV', 'BW', 'BX', 'BY', 'BZ')
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]
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for cols in column_groups:
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for i, header in enumerate(headers):
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cell = ws[f"{cols[i]}1"]
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cell.value = header
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cell.alignment = center_alignment
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row_pairs = [
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(2, 3), (5, 6), (8, 9), (11, 12), (14, 15),
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(17, 18), (20, 21), (23, 24), (26, 27), (29, 30)
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]
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phantom_sizes = [
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'(7mm)', '(6.5mm)', '(6mm)', '(5.5mm)', '(5mm)',
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'(4.5mm)', '(4mm)', '(3.5mm)', '(3mm)', '(2.5mm)'
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]
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# كتابة أسماء الفانتوم باللون الأحمر في العمود A (قبل الصف الأول)
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for i, size in enumerate(phantom_sizes):
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header_cell = ws.cell(row=row_pairs[i][0]-1, column=1, value=size)
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header_cell.font = red_font
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header_cell.alignment = center_alignment
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# توزيع نتائج ROI في هذه الصفوف والأعمدة كما في كودك
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result_idx = 0
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current_col_group = 0
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current_row_pair = 0
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self._write_result_to_cells(ws, result, cols, rows[1])
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result_idx += 1
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self.add_formulas_to_template(ws, rows, cols, red_font)
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current_col_group += 1
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current_col_group = 0
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current_row_pair += 1
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# ضبط المحاذاة للخلايا التي كُتبت بالفعل
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for cols in column_groups:
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for col in cols:
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for row in range(2, 31):
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if cell.value is not None:
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cell.alignment = center_alignment
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################################################################
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# وهنا بدلًا من وضع جداول STDDEV/Mean/CNR منفصلة،
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# نضع الجدول المدمج "1-AVG" من الصف 35 مثل الصورة التي أرسلتها
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################################################################
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# سنستخدم نفس فكرة الجدول بالدمج من D35:E35, F35:G35, H35:I35
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start_row = 35
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# ضع عنوان "1-AVG" في C35
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ws['C35'] = "1-AVG"
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ws['C35'].alignment = center_alignment
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# ادمج الخلايا الخاصة بالعناوين
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ws.merge_cells('D35:E35')
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ws.merge_cells('F35:G35')
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ws.merge_cells('H35:I35')
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# ضع العناوين باللون الأحمر
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avg_headers = {
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'D35': 'AVG MEAN',
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'F35': 'AVG STDDEV',
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ws[c_ref].font = red_font
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ws[c_ref].alignment = center_alignment
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# نفس أسماء الفانتوم
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phantom_sizes2 = [
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'(7.0mm)', '(6.5mm)', '(6.0mm)', '(5.5mm)', '(5.0mm)',
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'(4.5mm)', '(4.0mm)', '(3.5mm)', '(3.0mm)', '(2.5mm)'
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]
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for i, p_size in enumerate(phantom_sizes2):
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row = start_row + i + 1 # 36..45
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# ادمج لكل صف: D-E ، F-G ، H-I
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ws.merge_cells(f'D{row}:E{row}')
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ws.merge_cells(f'F{row}:G{row}')
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ws.merge_cells(f'H{row}:I{row}')
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# اكتب اسم الفانتوم باللون الأحمر في العمود C
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size_cell = ws[f'C{row}']
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size_cell.value = p_size
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size_cell.font = red_font
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size_cell.alignment = center_alignment
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# لكي نحسب الـAVG الحقيقي من الصفوف 2..3 إلخ،
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# نستخدم row_pairs[i] إن أردت. أو كما في المثال الأصلي:
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if i < len(row_pairs):
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(raw_row1, raw_row2) = row_pairs[i]
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else:
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continue # لو عندك 10 فقط
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# لنفترض أننا نقرأ من نفس الأعمدة اللي فيها mean & std
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# نفترض عندنا على الأقل عمود mean_col = cols[1], stddev_col = cols[2]
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# لكن عندك عدة col groups؛ إذا تريد تجمع من الأول فقط:
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# أو خذ فكرة snippetك السابق:
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mean_values = []
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stddev_values = []
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cnr_values = []
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# Example: لو تحب تجمع من نفس الـ column_groups الأولى بس
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for group in column_groups:
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mean_col = group[1] # 'C','I','O'...الخ
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std_col = group[2] # 'D','J','P'...الخ
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# raw_row1 = الصف الأول
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# raw_row2 = الصف الثاني
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m1 = ws[f"{mean_col}{raw_row1}"].value
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m2 = ws[f"{mean_col}{raw_row2}"].value
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std2 = ws[f"{std_col}{raw_row1}"].value
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try:
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m1 = float(m1) if m1 not in [None,''] else None
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m2 = float(m2) if m2 not in [None,''] else None
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std2 = float(std2) if std2 not in [None,''] else None
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except:
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m1,m2,std2 = None,None,None
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if (m1 is not None) and (m2 is not None) and (std2 is not None) and (std2!=0):
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| 519 |
+
mean_values.append(m1)
|
| 520 |
+
stddev_values.append(std2)
|
| 521 |
+
cnr_values.append((m1 - m2)/std2)
|
|
|
|
|
|
|
|
|
|
| 522 |
|
| 523 |
+
# الآن نحسب المتوسط
|
| 524 |
+
if len(mean_values) > 0:
|
| 525 |
+
final_mean = sum(mean_values)/len(mean_values)
|
| 526 |
+
else:
|
| 527 |
+
final_mean = None
|
| 528 |
+
|
| 529 |
+
if len(stddev_values) > 0:
|
| 530 |
+
final_std = sum(stddev_values)/len(stddev_values)
|
| 531 |
+
else:
|
| 532 |
+
final_std = None
|
| 533 |
+
|
| 534 |
+
if len(cnr_values) > 0:
|
| 535 |
+
final_cnr = sum(cnr_values)/len(cnr_values)
|
| 536 |
+
else:
|
| 537 |
+
final_cnr = None
|
| 538 |
|
| 539 |
+
# نكتبها في الخلايا المدمجة
|
| 540 |
if final_mean is not None:
|
| 541 |
ws[f'D{row}'].value = final_mean
|
| 542 |
ws[f'D{row}'].alignment = center_alignment
|
|
|
|
| 552 |
ws[f'H{row}'].alignment = center_alignment
|
| 553 |
ws[f'H{row}'].number_format = '0.0000'
|
| 554 |
|
| 555 |
+
# أخيراً، ضع الحدود حول C35..I45
|
| 556 |
thin_side = openpyxl.styles.Side(style='thin')
|
| 557 |
border = openpyxl.styles.Border(
|
| 558 |
left=thin_side, right=thin_side, top=thin_side, bottom=thin_side
|
|
|
|
| 566 |
except Exception as e:
|
| 567 |
logger.error(f"Error saving formatted results: {str(e)}")
|
| 568 |
return None, f"Error saving results: {str(e)}"
|
| 569 |
+
########################################################################
|
| 570 |
|
| 571 |
def _write_result_to_cells(self, ws, result, cols, row):
|
| 572 |
center_alignment = openpyxl.styles.Alignment(horizontal='center')
|
|
|
|
| 617 |
return image, self.format_results()
|
| 618 |
|
| 619 |
def undo_last(self, image):
|
| 620 |
+
if not self.results: # لو مفيش نتائج أصلاً
|
| 621 |
return self.update_display(), self.format_results()
|
| 622 |
|
| 623 |
last_result = self.results[-1]
|
| 624 |
+
# نتحقق إذا كان آخر إجراء قياس حقيقي أم صف صفري
|
| 625 |
is_measurement = last_result['Point'] != '(0, 0)'
|
| 626 |
|
| 627 |
+
# نمسح آخر نتيجة
|
| 628 |
self.results.pop()
|
| 629 |
|
| 630 |
+
# لو كان قياس حقيقي، نمسح العلامة المقابلة له
|
| 631 |
if is_measurement and self.marks:
|
| 632 |
self.marks.pop()
|
| 633 |
|