carbon-demo / data /species_tree.json
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lvwerra HF Staff
Species tree: drop viruses + retitle (25 species, 571,789 sequences)
a54539b
{
"species": [
"human",
"macaque",
"mouse",
"rat",
"dog",
"cow",
"pig",
"chicken",
"frog",
"zebrafish",
"fly",
"worm",
"arabidopsis",
"soybean",
"tomato",
"maize",
"rice",
"yeast",
"fission_yeast",
"candida",
"aspergillus",
"neurospora",
"ecoli",
"bsubtilis",
"saureus"
],
"kingdom": [
"vertebrates",
"vertebrates",
"vertebrates",
"vertebrates",
"vertebrates",
"vertebrates",
"vertebrates",
"vertebrates",
"vertebrates",
"vertebrates",
"invertebrates",
"invertebrates",
"plants",
"plants",
"plants",
"plants",
"plants",
"fungi",
"fungi",
"fungi",
"fungi",
"fungi",
"bacteria",
"bacteria",
"bacteria"
],
"expected_clade": [
"primates",
"primates",
"rodents",
"rodents",
"laurasiatheria",
"laurasiatheria",
"laurasiatheria",
"sauropsida",
"amphibia",
"actinopterygii",
"insects",
"nematodes",
"dicots",
"dicots",
"dicots",
"monocots",
"monocots",
"saccharomycetes",
"schizosaccharomycetes",
"saccharomycetes",
"pezizomycotina",
"pezizomycotina",
"proteobacteria",
"firmicutes",
"firmicutes"
],
"counts": [
59115,
31189,
56595,
27055,
21144,
28209,
32839,
23700,
22858,
23317,
2301,
2734,
31190,
56046,
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398,
5154,
6217,
10567,
9769,
4237,
4237,
2624
],
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