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8e984cf
1
Parent(s):
370b9a0
fix: notebook url assembly
Browse files
notebooks/01_tracks_prediction.ipynb
CHANGED
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@@ -192,7 +192,7 @@
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| 192 |
" return fa_path\n",
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| 193 |
"\n",
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| 194 |
" # UCSC chrom fasta (chromFa/)\n",
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| 195 |
-
" url = f\"https://hgdownload.soe.ucsc.edu/goldenPath
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| 196 |
" print(\"Downloading:\", url)\n",
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| 197 |
" r = requests.get(url, stream=True)\n",
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| 198 |
" r.raise_for_status()\n",
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| 192 |
" return fa_path\n",
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"\n",
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| 194 |
" # UCSC chrom fasta (chromFa/)\n",
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| 195 |
+
" url = f\"https://hgdownload.soe.ucsc.edu/goldenPath/{assembly}/chromosomes/{chrom}.fa.gz\"\n",
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| 196 |
" print(\"Downloading:\", url)\n",
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| 197 |
" r = requests.get(url, stream=True)\n",
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| 198 |
" r.raise_for_status()\n",
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