Update app.py
Browse files
app.py
CHANGED
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@@ -227,56 +227,101 @@ if app_choice == "π Protein Repeat Finder":
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result_df = pd.DataFrame(rows)
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st.dataframe(result_df)
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# ------------------- COMPARATOR FUNCTIONALITY -------------------
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elif app_choice == "π Protein Comparator":
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st.
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file2 = st.file_uploader("Upload Second Excel File", type=["xlsx"], key="comp2")
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if file1 and file2:
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df1 = pd.read_excel(file1, header=0)
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df2 = pd.read_excel(file2, header=0)
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df1.columns = df1.columns.astype(str)
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df2.columns = df2.columns.astype(str)
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id_col = df1.columns[0]
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name_col = df1.columns[1]
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repeat_columns = df1.columns[2:]
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differences = []
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for i in range(len(df1)):
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row1 = df1.iloc[i]
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row2 = df2.iloc[i] if i < len(df2) else None
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if row2 is not None:
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diff_row = {
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"Entry": row1[id_col],
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"Protein Name": row1[name_col]
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}
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for repeat in repeat_columns:
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val1 = row1.get(repeat, 0)
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val2 = row2.get(repeat, 0)
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diff_row[repeat] = abs(val1 - val2)
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differences.append(diff_row)
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result_df = pd.DataFrame(differences)
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st.dataframe(result_df)
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writer = pd.ExcelWriter(output, engine='xlsxwriter')
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df.to_excel(writer, index=False, sheet_name='Comparison')
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writer.close()
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output.seek(0)
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return output
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st.download_button(
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label="Download Comparison Excel",
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data=excel_file,
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file_name="comparison_result.xlsx",
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mime="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"
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)
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result_df = pd.DataFrame(rows)
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st.dataframe(result_df)
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# ------------------- COMPARATOR FUNCTIONALITY -------------------
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# ------------------- COMPARATOR FUNCTIONALITY -------------------
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elif app_choice == "π Protein Comparator":
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st.set_page_config(page_title="Protein Repeat Comparator", layout="centered")
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st.title("𧬠Protein Repeat Comparator")
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st.write("Upload two Excel files with protein data. Frequency values should start from the first row (header).")
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uploaded_file1 = st.file_uploader("Upload First Excel File", type=["xlsx"], key="comp1")
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uploaded_file2 = st.file_uploader("Upload Second Excel File", type=["xlsx"], key="comp2")
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if uploaded_file1 and uploaded_file2:
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try:
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df1 = pd.read_excel(uploaded_file1, header=0)
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df2 = pd.read_excel(uploaded_file2, header=0)
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df1.columns = df1.columns.astype(str)
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df2.columns = df2.columns.astype(str)
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id_col = df1.columns[0]
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name_col = df1.columns[1]
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repeat_columns = df1.columns[2:]
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differences = []
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for _, row1 in df1.iterrows():
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entry_id = row1[id_col]
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protein_name = row1[name_col]
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row2_match = df2[(df2[id_col] == entry_id) & (df2[name_col] == protein_name)]
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if row2_match.empty:
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continue
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row2 = row2_match.iloc[0]
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for repeat_col in repeat_columns:
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freq1 = row1[repeat_col]
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freq2 = row2[repeat_col]
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if pd.isna(freq1) or pd.isna(freq2):
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continue
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if freq1 != freq2:
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if freq1 == 0:
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pct_change = "Infinity"
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else:
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pct_change = ((freq2 - freq1) / freq1) * 100
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pct_change = round(pct_change, 2)
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diff = abs(freq1 - freq2)
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differences.append({
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id_col: entry_id,
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name_col: protein_name,
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"Repeat": repeat_col,
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"Frequency File 1": freq1,
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"Frequency File 2": freq2,
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"Difference": diff,
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"%age Change": pct_change
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})
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if differences:
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result_df = pd.DataFrame(differences)
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result_df = result_df.sort_values(by="Difference", ascending=False)
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# Show DataFrame in Streamlit app
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st.subheader("π View Changed Repeats")
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st.dataframe(result_df, use_container_width=True)
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# Apply styling
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def color_pct(val):
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if isinstance(val, str) and val == "Infinity":
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return 'color: green'
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elif isinstance(val, (int, float)):
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if val > 0:
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return 'color: green'
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elif val < 0:
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return 'color: red'
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return ''
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styled_df = result_df.style.applymap(color_pct, subset=["%age Change"])
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# Save styled output
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output = BytesIO()
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with pd.ExcelWriter(output, engine='openpyxl') as writer:
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styled_df.to_excel(writer, index=False, sheet_name="Changed Repeats")
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output.seek(0)
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st.download_button(
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label="π₯ Download Excel File",
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data=output,
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file_name="changed_repeats_with_percentage.xlsx",
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mime="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"
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)
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else:
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st.info("No changes in repeat frequencies were found.")
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except Exception as e:
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st.error(f"β Error: {e}")
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