Spaces:
Sleeping
Sleeping
Jude Joseph Agustino commited on
Commit ·
ca8798e
1
Parent(s): e0c3c75
Initial Commit: CropGuard disease detection app
Browse files- Dockerfile +30 -0
- README.md +22 -4
- app.py +178 -0
- converter.py +19 -0
- fastapi_app.py +71 -0
- models.py +60 -0
- plant-disease-model-state-dict.pth +3 -0
- requirements.txt +4 -0
Dockerfile
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# Use Python 3.13.7 slim image for better performance and smaller size
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FROM python:3.13.7-slim
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# Set working directory
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WORKDIR /app
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# Install system dependencies
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RUN apt-get update && apt-get install -y \
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build-essential \
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&& rm -rf /var/lib/apt/lists/*
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# Copy requirements first to leverage Docker cache
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COPY requirements.txt .
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# Install Python dependencies
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RUN pip install --no-cache-dir --upgrade pip && \
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pip install --no-cache-dir -r requirements.txt
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# Copy application files
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COPY . .
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# Create a non-root user for security
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RUN useradd --create-home --shell /bin/bash app && chown -R app:app /app
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USER app
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# Expose the port that Hugging Face Spaces expects
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EXPOSE 7860
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# Command to run the application
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CMD ["uvicorn", "fastapi_app:app", "--host", "0.0.0.0", "--port", "7860"]
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README.md
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---
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title:
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emoji:
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colorFrom: green
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-
colorTo:
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sdk: docker
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pinned: false
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---
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-
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---
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title: CropGuard Plant Disease Detection
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emoji: 🌱
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colorFrom: green
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colorTo: blue
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sdk: docker
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pinned: false
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license: apache-2.0
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---
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# CropGuard - Plant Disease Detection
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This is a plant disease classification system using a ResNet-9 model trained on the PlantVillage dataset.
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## Features
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- Detects diseases in 38 different plant categories
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- Supports multiple plant types: Apple, Corn, Tomato, Potato, Grape, and more
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- Real-time prediction with confidence scores
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- User-friendly web interface
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## Usage
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Simply upload an image of a plant leaf, and the model will predict the disease (if any) with confidence scores.
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## Model Details
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- Architecture: ResNet-9
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- Dataset: PlantVillage
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- Classes: 38 plant disease categories
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- Input: 256x256 RGB images
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app.py
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import gradio as gr
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import torch
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import torch.nn.functional as F
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import torchvision.transforms as transforms
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from PIL import Image
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import os
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# Import your model
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from models import ResNet9
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# Plant disease class names
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CLASS_NAMES = [
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'Apple___Apple_scab',
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'Apple___Black_rot',
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'Apple___Cedar_apple_rust',
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'Apple___healthy',
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'Blueberry___healthy',
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'Cherry_(including_sour)__Powdery_mildew',
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'Cherry(including_sour)__healthy',
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'Corn(maize)__Cercospora_leaf_spot Gray_leaf_spot',
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'Corn(maize)_Common_rust',
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'Corn(maize)__Northern_Leaf_Blight',
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'Corn(maize)healthy',
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'Grape___Black_rot',
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'Grape___Esca(Black_Measles)',
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'Grape___Leaf_blight(Isariopsis_Leaf_Spot)',
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'Grape___healthy',
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'Orange___Haunglongbing(Citrus_greening)',
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'Peach___Bacterial_spot',
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'Peach___healthy',
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'Pepper,_bell___Bacterial_spot',
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'Pepper,_bell___healthy',
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'Potato___Early_blight',
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'Potato___Late_blight',
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'Potato___healthy',
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'Raspberry___healthy',
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'Soybean___healthy',
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'Squash___Powdery_mildew',
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'Strawberry___Leaf_scorch',
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'Strawberry___healthy',
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'Tomato___Bacterial_spot',
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'Tomato___Early_blight',
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'Tomato___Late_blight',
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'Tomato___Leaf_Mold',
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'Tomato___Septoria_leaf_spot',
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'Tomato___Spider_mites Two-spotted_spider_mite',
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'Tomato___Target_Spot',
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'Tomato___Tomato_Yellow_Leaf_Curl_Virus',
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'Tomato___Tomato_mosaic_virus',
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'Tomato___healthy'
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]
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# Load model
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model = None
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def load_model():
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global model
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try:
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model = ResNet9(3, len(CLASS_NAMES))
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state_dict = torch.load("plant-disease-model-state-dict.pth", map_location="cpu")
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model.load_state_dict(state_dict)
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model.eval()
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print("✅ Model loaded successfully")
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return True
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except Exception as e:
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print(f"❌ Model load failed: {e}")
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return False
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def predict_disease(image):
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"""Predict plant disease from image"""
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if model is None:
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if not load_model():
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return {"Error": "Model not available"}
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# Transform image
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transform = transforms.Compose([
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transforms.Resize((256, 256)),
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transforms.ToTensor()
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])
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try:
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# Convert and transform image
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if image is None:
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return {"Error": "No image provided"}
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img_tensor = transform(image).unsqueeze(0)
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# Make prediction
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with torch.no_grad():
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outputs = model(img_tensor)
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probabilities = F.softmax(outputs[0], dim=0)
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# Get top 5 predictions
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top5_prob, top5_indices = torch.topk(probabilities, 5)
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# Format results for Gradio
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results = {}
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for i, (prob, idx) in enumerate(zip(top5_prob, top5_indices)):
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class_name = CLASS_NAMES[idx.item()]
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# Clean up class name for display
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clean_name = class_name.replace('___', ' - ').replace('_', ' ')
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results[clean_name] = float(prob)
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return results
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except Exception as e:
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return {"Error": f"Prediction failed: {str(e)}"}
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def format_class_info():
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"""Format class information for display"""
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plants = {}
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for class_name in CLASS_NAMES:
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if '___' in class_name:
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plant, condition = class_name.split('___', 1)
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if plant not in plants:
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plants[plant] = []
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plants[plant].append(condition.replace('_', ' '))
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info = "## Supported Plants and Conditions:\n\n"
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for plant, conditions in sorted(plants.items()):
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info += f"**{plant.replace('_', ' ')}**: {', '.join(conditions)}\n\n"
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return info
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# Load model on startup
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load_model()
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# Create Gradio interface
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with gr.Blocks(title="🌱 CropGuard - Plant Disease Detection", theme=gr.themes.Soft()) as demo:
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gr.Markdown("""
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# 🌱 CropGuard - Plant Disease Detection
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Upload an image of a plant leaf to detect diseases using our ResNet-9 model trained on the PlantVillage dataset.
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**Supported formats**: JPG, PNG, JPEG
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""")
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with gr.Row():
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with gr.Column():
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image_input = gr.Image(
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type="pil",
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label="Upload Plant Image",
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height=400
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)
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predict_btn = gr.Button("🔍 Analyze Disease", variant="primary", size="lg")
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with gr.Column():
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output = gr.Label(
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label="Disease Prediction Results",
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num_top_classes=5,
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show_label=True
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)
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# Example images (you can add these later)
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gr.Markdown("### 📋 Examples")
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gr.Markdown("Try uploading images of plant leaves to see the disease detection in action!")
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# Info section
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with gr.Accordion("ℹ️ Supported Plants & Diseases", open=False):
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gr.Markdown(format_class_info())
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# Event handlers
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predict_btn.click(
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fn=predict_disease,
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inputs=image_input,
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outputs=output
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)
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# Also predict on image upload
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image_input.change(
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fn=predict_disease,
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inputs=image_input,
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outputs=output
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)
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# Launch the app
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if __name__ == "__main__":
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demo.launch()
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converter.py
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import torch
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from models import ResNet9
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# Load the existing model
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try:
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old_model = torch.load("plant-disease-model.pth", map_location="cpu", weights_only=False)
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# Save only the state dict
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torch.save(old_model.state_dict(), "plant-disease-model-state-dict.pth")
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print("✅ Model converted to state dict format")
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# Test loading the new format
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new_model = ResNet9(3, 38) # 38 classes based on your CLASS_NAMES
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new_model.load_state_dict(torch.load("plant-disease-model-state-dict.pth"))
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new_model.eval()
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print("✅ Converted model loads successfully")
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except Exception as e:
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print(f"❌ Conversion failed: {e}")
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fastapi_app.py
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| 1 |
+
from fastapi import FastAPI, File, UploadFile
|
| 2 |
+
from fastapi.responses import JSONResponse
|
| 3 |
+
from PIL import Image
|
| 4 |
+
import torch
|
| 5 |
+
import torch.nn.functional as F
|
| 6 |
+
import torchvision.transforms as transforms
|
| 7 |
+
import io
|
| 8 |
+
from models import ResNet9
|
| 9 |
+
|
| 10 |
+
app = FastAPI(title="CropGuard - Plant Disease Detection")
|
| 11 |
+
|
| 12 |
+
CLASS_NAMES = [
|
| 13 |
+
'Apple___Apple_scab', 'Apple___Black_rot', 'Apple___Cedar_apple_rust', 'Apple___healthy',
|
| 14 |
+
'Blueberry___healthy', 'Cherry_(including_sour)__Powdery_mildew', 'Cherry(including_sour)__healthy',
|
| 15 |
+
'Corn(maize)__Cercospora_leaf_spot Gray_leaf_spot', 'Corn(maize)_Common_rust',
|
| 16 |
+
'Corn(maize)__Northern_Leaf_Blight', 'Corn(maize)healthy', 'Grape___Black_rot',
|
| 17 |
+
'Grape___Esca(Black_Measles)', 'Grape___Leaf_blight(Isariopsis_Leaf_Spot)', 'Grape___healthy',
|
| 18 |
+
'Orange___Haunglongbing(Citrus_greening)', 'Peach___Bacterial_spot', 'Peach___healthy',
|
| 19 |
+
'Pepper,_bell___Bacterial_spot', 'Pepper,_bell___healthy', 'Potato___Early_blight',
|
| 20 |
+
'Potato___Late_blight', 'Potato___healthy', 'Raspberry___healthy', 'Soybean___healthy',
|
| 21 |
+
'Squash___Powdery_mildew', 'Strawberry___Leaf_scorch', 'Strawberry___healthy',
|
| 22 |
+
'Tomato___Bacterial_spot', 'Tomato___Early_blight', 'Tomato___Late_blight', 'Tomato___Leaf_Mold',
|
| 23 |
+
'Tomato___Septoria_leaf_spot', 'Tomato___Spider_mites Two-spotted_spider_mite', 'Tomato___Target_Spot',
|
| 24 |
+
'Tomato___Tomato_Yellow_Leaf_Curl_Virus', 'Tomato___Tomato_mosaic_virus', 'Tomato___healthy'
|
| 25 |
+
]
|
| 26 |
+
|
| 27 |
+
model = None
|
| 28 |
+
|
| 29 |
+
def load_model():
|
| 30 |
+
global model
|
| 31 |
+
if model is None:
|
| 32 |
+
model = ResNet9(3, len(CLASS_NAMES))
|
| 33 |
+
state_dict = torch.load("plant-disease-model-state-dict.pth", map_location="cpu")
|
| 34 |
+
model.load_state_dict(state_dict)
|
| 35 |
+
model.eval()
|
| 36 |
+
|
| 37 |
+
load_model()
|
| 38 |
+
|
| 39 |
+
@app.post("/predict")
|
| 40 |
+
async def predict(file: UploadFile = File(...)):
|
| 41 |
+
try:
|
| 42 |
+
image_bytes = await file.read()
|
| 43 |
+
image = Image.open(io.BytesIO(image_bytes)).convert("RGB")
|
| 44 |
+
transform = transforms.Compose([
|
| 45 |
+
transforms.Resize((256, 256)),
|
| 46 |
+
transforms.ToTensor()
|
| 47 |
+
])
|
| 48 |
+
img_tensor = transform(image)
|
| 49 |
+
if isinstance(img_tensor, torch.Tensor) and img_tensor.ndimension() == 3:
|
| 50 |
+
img_tensor = img_tensor.unsqueeze(0)
|
| 51 |
+
global model
|
| 52 |
+
if model is None:
|
| 53 |
+
load_model()
|
| 54 |
+
if model is None:
|
| 55 |
+
raise RuntimeError("Model failed to load.")
|
| 56 |
+
with torch.no_grad():
|
| 57 |
+
outputs = model(img_tensor)
|
| 58 |
+
probabilities = F.softmax(outputs[0], dim=0)
|
| 59 |
+
top5_prob, top5_indices = torch.topk(probabilities, 5)
|
| 60 |
+
results = {}
|
| 61 |
+
for prob, idx in zip(top5_prob, top5_indices):
|
| 62 |
+
class_name = CLASS_NAMES[int(idx.item())]
|
| 63 |
+
clean_name = class_name.replace('___', ' - ').replace('_', ' ')
|
| 64 |
+
results[clean_name] = float(prob)
|
| 65 |
+
return JSONResponse(content={"predictions": results})
|
| 66 |
+
except Exception as e:
|
| 67 |
+
return JSONResponse(content={"error": str(e)}, status_code=500)
|
| 68 |
+
|
| 69 |
+
@app.get("/")
|
| 70 |
+
def root():
|
| 71 |
+
return {"message": "CropGuard FastAPI is running. Use /predict to POST an image."}
|
models.py
ADDED
|
@@ -0,0 +1,60 @@
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|
| 1 |
+
import torch
|
| 2 |
+
import torch.nn as nn
|
| 3 |
+
import torch.nn.functional as F
|
| 4 |
+
|
| 5 |
+
def ConvBlock(in_channels, out_channels, pool=False):
|
| 6 |
+
layers = [nn.Conv2d(in_channels, out_channels, kernel_size=3, padding=1),
|
| 7 |
+
nn.BatchNorm2d(out_channels),
|
| 8 |
+
nn.ReLU(inplace=True)]
|
| 9 |
+
if pool:
|
| 10 |
+
layers.append(nn.MaxPool2d(4))
|
| 11 |
+
return nn.Sequential(*layers)
|
| 12 |
+
|
| 13 |
+
class ImageClassificationBase(nn.Module):
|
| 14 |
+
def training_step(self, batch):
|
| 15 |
+
images, labels = batch
|
| 16 |
+
out = self(images)
|
| 17 |
+
loss = F.cross_entropy(out, labels)
|
| 18 |
+
return loss
|
| 19 |
+
|
| 20 |
+
def validation_step(self, batch):
|
| 21 |
+
images, labels = batch
|
| 22 |
+
out = self(images)
|
| 23 |
+
loss = F.cross_entropy(out, labels)
|
| 24 |
+
acc = (out.argmax(dim=1) == labels).float().mean()
|
| 25 |
+
return {"val_loss": loss.detach(), "val_accuracy": acc}
|
| 26 |
+
|
| 27 |
+
def validation_epoch_end(self, outputs):
|
| 28 |
+
batch_losses = [x["val_loss"] for x in outputs]
|
| 29 |
+
batch_accuracy = [x["val_accuracy"] for x in outputs]
|
| 30 |
+
epoch_loss = torch.stack(batch_losses).mean()
|
| 31 |
+
epoch_accuracy = torch.stack(batch_accuracy).mean()
|
| 32 |
+
return {"val_loss": epoch_loss, "val_accuracy": epoch_accuracy}
|
| 33 |
+
|
| 34 |
+
def epoch_end(self, epoch, result):
|
| 35 |
+
print(f"Epoch [{epoch}], train_loss: {result['train_loss']:.4f}, val_loss: {result['val_loss']:.4f}, val_acc: {result['val_accuracy']:.4f}")
|
| 36 |
+
|
| 37 |
+
|
| 38 |
+
class ResNet9(ImageClassificationBase):
|
| 39 |
+
def __init__(self, in_channels, num_classes):
|
| 40 |
+
super().__init__()
|
| 41 |
+
self.conv1 = ConvBlock(in_channels, 64)
|
| 42 |
+
self.conv2 = ConvBlock(64, 128, pool=True)
|
| 43 |
+
self.res1 = nn.Sequential(ConvBlock(128, 128), ConvBlock(128, 128))
|
| 44 |
+
self.conv3 = ConvBlock(128, 256, pool=True)
|
| 45 |
+
self.conv4 = ConvBlock(256, 512, pool=True)
|
| 46 |
+
self.res2 = nn.Sequential(ConvBlock(512, 512), ConvBlock(512, 512))
|
| 47 |
+
self.classifier = nn.Sequential(
|
| 48 |
+
nn.MaxPool2d(4),
|
| 49 |
+
nn.Flatten(),
|
| 50 |
+
nn.Linear(512, num_classes)
|
| 51 |
+
)
|
| 52 |
+
def forward(self, xb):
|
| 53 |
+
out = self.conv1(xb)
|
| 54 |
+
out = self.conv2(out)
|
| 55 |
+
out = self.res1(out) + out
|
| 56 |
+
out = self.conv3(out)
|
| 57 |
+
out = self.conv4(out)
|
| 58 |
+
out = self.res2(out) + out
|
| 59 |
+
out = self.classifier(out)
|
| 60 |
+
return out
|
plant-disease-model-state-dict.pth
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:b5e9497ddbb41600362d95c00ad1fe96b2b3ed637ac8a27cc2803e8acff1144d
|
| 3 |
+
size 26397109
|
requirements.txt
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
torch
|
| 2 |
+
torchvision
|
| 3 |
+
Pillow
|
| 4 |
+
fastapi[standard]
|