| # K R&D Lab — Cancer Research Suite |
| # Author: Oksana Kolisnyk | kosatiks-group.pp.ua |
| # Repo: github.com/TEZv/K-RnD-Lab-PHYLO-03_2026 |
| # |
| # Install: pip install -r requirements.txt |
| # Python: >= 3.10 |
|
|
| # ── Data & Numerics ────────────────────────── |
| numpy>=1.24.0 |
| pandas>=2.0.0 |
| scipy>=1.11.0 |
|
|
| # ── Visualization ──────────────────────────── |
| matplotlib>=3.7.0 |
| Pillow>=10.0.0 |
| plotly>=5.18.0 |
| scikit-learn>=1.3.0 |
| xgboost>=2.0.0 |
|
|
| # ── HTTP / APIs ────────────────────────────── |
| requests>=2.31.0 |
|
|
| # ── Journal formatting ─────────────────────── |
| tabulate>=0.9.0 |
|
|
| # ── RAG Chatbot (Tab A6) ───────────────────── |
| sentence-transformers>=2.6.0 |
| faiss-cpu>=1.7.4 |
| torch>=2.0.0 |
|
|
| # ── Optional: faster tokenization ──────────── |
| # tokenizers>=0.15.0 # installed automatically with sentence-transformers |
|
|
| # ── HuggingFace Spaces compatibility ───────── |
| # Note: Gradio version is controlled by sdk_version in README.md |
| # Do NOT add gradio to this file when deploying to HF Spaces |
