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b3c1441
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1 Parent(s): e8dd2b7

Update app.py

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  1. app.py +34 -34
app.py CHANGED
@@ -753,27 +753,27 @@ with gr.Blocks(css=css, title="K R&D Lab · S1 Biomedical") as demo:
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  # =============================================================================
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  # =============================================================================
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- # === START: S1-E · R1a · Liquid Biopsy ======================================
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  # =============================================================================
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- with gr.TabItem("S1-E · R1a · Liquid Biopsy"):
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- gr.HTML(proj_badge("S1-E · R1a", "Liquid Biopsy Classifier", "AUC = 0.992*"))
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- with gr.Row():
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- p1=gr.Slider(-3,3,value=0,step=0.1,label="CTHRC1")
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- p2=gr.Slider(-3,3,value=0,step=0.1,label="FHL2")
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- p3=gr.Slider(-3,3,value=0,step=0.1,label="LDHA")
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- p4=gr.Slider(-3,3,value=0,step=0.1,label="P4HA1")
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- p5=gr.Slider(-3,3,value=0,step=0.1,label="SERPINH1")
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- with gr.Row():
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- p6=gr.Slider(-3,3,value=0,step=0.1,label="ABCA8")
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- p7=gr.Slider(-3,3,value=0,step=0.1,label="CA4")
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- p8=gr.Slider(-3,3,value=0,step=0.1,label="CKB")
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- p9=gr.Slider(-3,3,value=0,step=0.1,label="NNMT")
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- p10=gr.Slider(-3,3,value=0,step=0.1,label="CACNA2D2")
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- b7=gr.Button("Classify", variant="primary")
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- o7t=gr.HTML(); o7p=gr.Image(label="Feature contributions")
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- gr.Examples([[2,2,1.5,1.8,1.6,-1,-1.2,-0.8,1.4,-1.1],[0]*10],
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- inputs=[p1,p2,p3,p4,p5,p6,p7,p8,p9,p10])
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- b7.click(predict_cancer, [p1,p2,p3,p4,p5,p6,p7,p8,p9,p10], [o7t,o7p])
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  # =============================================================================
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  # === END: S1-E · R1a =========================================================
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  # =============================================================================
@@ -791,20 +791,20 @@ with gr.Blocks(css=css, title="K R&D Lab · S1 Biomedical") as demo:
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  # =============================================================================
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  # === START: S1-F · R1a · DIPG Toolkit =======================================
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  # =============================================================================
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- # with gr.TabItem("S1-F · R1a · DIPG Toolkit"):
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- # gr.HTML(proj_badge("S1-F · R1a", "DIPG: H3K27M + CSF LNP + Circadian", "PBTA"))
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- # sort_d = gr.Radio(["Frequency", "Drug status"], value="Frequency", label="Sort by")
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- # b_dv = gr.Button("Load DIPG Variants", variant="primary")
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- # o_dv = gr.Dataframe(label="H3K27M co-mutations")
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- # b_dv.click(dipg_variants, [sort_d], o_dv)
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- # gr.Markdown("---")
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- # with gr.Row():
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- # d_peg = gr.Slider(0.5, 3.0, value=1.5, step=0.1, label="PEG mol%")
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- # d_size = gr.Slider(60, 150, value=90, step=5, label="Target size (nm)")
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- # b_dc = gr.Button("Rank CSF Formulations", variant="primary")
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- # o_dct = gr.Dataframe(label="CSF LNP ranking")
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- # o_dcp = gr.Image(label="ApoE% in CSF corona")
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- # b_dc.click(dipg_csf, [d_peg, d_size], [o_dct, o_dcp])
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  # =============================================================================
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  # === END: S1-F · R1a =========================================================
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  # =============================================================================
 
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  # =============================================================================
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  # =============================================================================
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+ # === START: S1-E · R1a · Liquid Biopsy ====================================== оце
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  # =============================================================================
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+ # with gr.TabItem("S1-E · R1a · Liquid Biopsy"):
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+ # gr.HTML(proj_badge("S1-E · R1a", "Liquid Biopsy Classifier", "AUC = 0.992*"))
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+ # with gr.Row():
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+ # p1=gr.Slider(-3,3,value=0,step=0.1,label="CTHRC1")
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+ # p2=gr.Slider(-3,3,value=0,step=0.1,label="FHL2")
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+ # p3=gr.Slider(-3,3,value=0,step=0.1,label="LDHA")
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+ # p4=gr.Slider(-3,3,value=0,step=0.1,label="P4HA1")
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+ # p5=gr.Slider(-3,3,value=0,step=0.1,label="SERPINH1")
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+ # with gr.Row():
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+ # p6=gr.Slider(-3,3,value=0,step=0.1,label="ABCA8")
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+ # p7=gr.Slider(-3,3,value=0,step=0.1,label="CA4")
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+ # p8=gr.Slider(-3,3,value=0,step=0.1,label="CKB")
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+ # p9=gr.Slider(-3,3,value=0,step=0.1,label="NNMT")
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+ # p10=gr.Slider(-3,3,value=0,step=0.1,label="CACNA2D2")
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+ # b7=gr.Button("Classify", variant="primary")
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+ # o7t=gr.HTML(); o7p=gr.Image(label="Feature contributions")
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+ # gr.Examples([[2,2,1.5,1.8,1.6,-1,-1.2,-0.8,1.4,-1.1],[0]*10],
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+ # inputs=[p1,p2,p3,p4,p5,p6,p7,p8,p9,p10])
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+ # b7.click(predict_cancer, [p1,p2,p3,p4,p5,p6,p7,p8,p9,p10], [o7t,o7p])
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  # =============================================================================
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  # === END: S1-E · R1a =========================================================
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  # =============================================================================
 
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  # =============================================================================
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  # === START: S1-F · R1a · DIPG Toolkit =======================================
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  # =============================================================================
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+ with gr.TabItem("S1-F · R1a · DIPG Toolkit"):
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+ gr.HTML(proj_badge("S1-F · R1a", "DIPG: H3K27M + CSF LNP + Circadian", "PBTA"))
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+ sort_d = gr.Radio(["Frequency", "Drug status"], value="Frequency", label="Sort by")
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+ b_dv = gr.Button("Load DIPG Variants", variant="primary")
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+ o_dv = gr.Dataframe(label="H3K27M co-mutations")
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+ b_dv.click(dipg_variants, [sort_d], o_dv)
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+ gr.Markdown("---")
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+ with gr.Row():
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+ d_peg = gr.Slider(0.5, 3.0, value=1.5, step=0.1, label="PEG mol%")
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+ d_size = gr.Slider(60, 150, value=90, step=5, label="Target size (nm)")
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+ b_dc = gr.Button("Rank CSF Formulations", variant="primary")
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+ o_dct = gr.Dataframe(label="CSF LNP ranking")
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+ o_dcp = gr.Image(label="ApoE% in CSF corona")
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+ b_dc.click(dipg_csf, [d_peg, d_size], [o_dct, o_dcp])
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  # =============================================================================
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  # === END: S1-F · R1a =========================================================
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  # =============================================================================