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"""
FastAPI Backend for Respiratory Symptom Analysis
Updated for 39% F1-Macro Model (4 symptoms, no CBAM)
Deployed on HuggingFace Spaces for use with Netlify frontend
Version: 3.0.0
"""
from fastapi import FastAPI, File, UploadFile, HTTPException
from fastapi.middleware.cors import CORSMiddleware
from fastapi.responses import JSONResponse
import torch
import torch.nn as nn
import json
import numpy as np
import tempfile
import os
from pathlib import Path
from typing import Dict, List, Any
import time
import warnings
# Import your preprocessing module
from audio_preprocessing import RespiratoryAudioPreprocessor
warnings.filterwarnings('ignore')
# =================== YOUR EXACT MODEL ARCHITECTURE ===================
class LightweightMultiSymptomClassifier(nn.Module):
"""
Exact model architecture from your 39% F1-Macro training
4 symptoms: fever, cold, fatigue, cough
No CBAM, simplified CNN architecture
"""
def __init__(self, num_classes=4, dropout=0.5):
super().__init__()
self.num_classes = num_classes
# Convolutional backbone
self.conv1 = nn.Sequential(
nn.Conv2d(1, 32, kernel_size=3, padding=1),
nn.BatchNorm2d(32),
nn.ReLU(),
nn.Conv2d(32, 32, kernel_size=3, padding=1),
nn.BatchNorm2d(32),
nn.ReLU(),
nn.MaxPool2d(2)
)
self.conv2 = nn.Sequential(
nn.Conv2d(32, 64, kernel_size=3, padding=1),
nn.BatchNorm2d(64),
nn.ReLU(),
nn.Conv2d(64, 64, kernel_size=3, padding=1),
nn.BatchNorm2d(64),
nn.ReLU(),
nn.MaxPool2d(2)
)
self.conv3 = nn.Sequential(
nn.Conv2d(64, 128, kernel_size=3, padding=1),
nn.BatchNorm2d(128),
nn.ReLU(),
nn.Conv2d(128, 128, kernel_size=3, padding=1),
nn.BatchNorm2d(128),
nn.ReLU(),
nn.MaxPool2d(2)
)
self.conv4 = nn.Sequential(
nn.Conv2d(128, 256, kernel_size=3, padding=1),
nn.BatchNorm2d(256),
nn.ReLU(),
nn.Conv2d(256, 256, kernel_size=3, padding=1),
nn.BatchNorm2d(256),
nn.ReLU(),
nn.AdaptiveAvgPool2d((1, 1))
)
# Shared feature layer
self.shared_fc = nn.Sequential(
nn.Linear(256, 256),
nn.ReLU(),
nn.Dropout(dropout),
nn.Linear(256, 128),
nn.ReLU(),
nn.Dropout(dropout)
)
# Individual symptom heads
self.symptom_heads = nn.ModuleList([
nn.Linear(128, 1) for _ in range(num_classes)
])
def forward(self, x):
x = self.conv1(x)
x = self.conv2(x)
x = self.conv3(x)
x = self.conv4(x)
x = x.view(x.size(0), -1)
shared_features = self.shared_fc(x)
outputs = []
for head in self.symptom_heads:
outputs.append(head(shared_features))
logits = torch.cat(outputs, dim=1)
return logits
class OptimizedInferenceModel(nn.Module):
"""
Inference wrapper with custom thresholds
"""
def __init__(self, base_model, target_symptoms, confidence_thresholds):
super().__init__()
self.base_model = base_model
self.target_symptoms = target_symptoms
# Convert thresholds to tensor
self.register_buffer('threshold_tensor',
torch.tensor([confidence_thresholds[symptom]
for symptom in target_symptoms], dtype=torch.float32))
def forward(self, x):
# Get logits from base model
logits = self.base_model(x)
# Convert to probabilities
probs = torch.sigmoid(logits)
# Apply custom thresholds
preds = (probs >= self.threshold_tensor).float()
return {
'probabilities': probs,
'predictions': preds,
'logits': logits
}
# Initialize FastAPI app
app = FastAPI(
title="π« Respiratory Symptom Analysis API v3.0",
description="AI-powered respiratory symptom detection (39% F1-Macro model)",
version="3.0.0",
docs_url="/docs",
redoc_url="/redoc"
)
# Add CORS middleware
app.add_middleware(
CORSMiddleware,
allow_origins=["*"],
allow_credentials=True,
allow_methods=["*"],
allow_headers=["*"],
)
class RespiratoryAnalysisService:
"""
Service class for respiratory symptom analysis with 39% F1-Macro model
"""
def __init__(self, model_dir: str = "deployment_model"):
"""Initialize the service with model and configuration"""
self.model_dir = Path(model_dir)
self.model = None
self.config = None
self.preprocessor = None
self.weights_loaded = False
self.neutral_threshold = 0.35
# Load configuration and model
self.load_config()
self.create_and_load_model()
self.setup_preprocessor()
def load_config(self):
"""Load configuration"""
config_path = self.model_dir / "model_config.json"
try:
if config_path.exists():
with open(config_path, 'r') as f:
self.config = json.load(f)
if 'symptom_colors' not in self.config:
self.config['symptom_colors'] = {
'fever': '#FF6B6B',
'cold': '#4ECDC4',
'fatigue': '#FFEAA7',
'cough': '#DDA0DD'
}
print("β οΈ Added missing symptom_colors to config")
print(f"β
Configuration loaded from {config_path}")
else:
# Default configuration for 4-symptom model
self.config = {
'target_symptoms': ['fever', 'cold', 'fatigue', 'cough'],
'symptom_display_names': {
'fever': 'Fever',
'cold': 'Cold/Runny Nose',
'fatigue': 'Fatigue',
'cough': 'Persistent Cough'
},
'confidence_thresholds': {
'fever': 0.5,
'cold': 0.5,
'fatigue': 0.5,
'cough': 0.5
},
'symptom_colors': {
'fever': '#FF6B6B',
'cold': '#4ECDC4',
'fatigue': '#FFEAA7',
'cough': '#DDA0DD'
},
'model_version': '3.0_39percent_f1',
'num_classes': 4,
'dropout': 0.5
}
print("β οΈ Using default configuration")
except Exception as e:
raise RuntimeError(f"Failed to load config: {str(e)}")
def create_and_load_model(self):
"""Create model and load weights"""
try:
# Create base model
base_model = LightweightMultiSymptomClassifier(
num_classes=self.config['num_classes'],
dropout=self.config['dropout']
)
print("π Searching for model weight files...")
# Priority order for loading weights - UPDATED FILE NAMES
weight_files_to_try = [
(self.model_dir / "model_state_dict.pt", "Base Model State Dict"),
(self.model_dir / "model_quantized_state_dict.pt", "Quantized State Dict"),
(self.model_dir / "best_model.pt", "Best Checkpoint"),
]
for weight_file, model_type in weight_files_to_try:
if weight_file.exists():
file_size = weight_file.stat().st_size / (1024*1024)
print(f"π Found {model_type}: {weight_file} ({file_size:.1f}MB)")
try:
checkpoint = torch.load(weight_file, map_location='cpu', weights_only=False)
# Handle different checkpoint formats
if isinstance(checkpoint, dict):
if 'model_state_dict' in checkpoint:
state_dict = checkpoint['model_state_dict']
elif 'state_dict' in checkpoint:
state_dict = checkpoint['state_dict']
else:
# Assume it's a pure state dict
state_dict = checkpoint
else:
print(f"β οΈ Unexpected checkpoint format, skipping...")
continue
# Load state dict
missing, unexpected = base_model.load_state_dict(state_dict, strict=False)
loaded_keys = len(state_dict) - len(missing)
total_keys = len(base_model.state_dict())
load_percentage = (loaded_keys / total_keys) * 100
print(f" π Loaded {loaded_keys}/{total_keys} parameters ({load_percentage:.1f}%)")
if missing:
print(f" β οΈ Missing keys: {len(missing)}")
if unexpected:
print(f" β οΈ Unexpected keys: {len(unexpected)}")
if load_percentage > 90: # Require at least 90% match
self.weights_loaded = True
print(f"β
Successfully loaded {model_type}")
break
else:
print(f"β οΈ Only {load_percentage:.1f}% loaded, trying next file...")
except Exception as e:
print(f"β οΈ Failed to load {model_type}: {str(e)}")
continue
if not self.weights_loaded:
print("\nβ WARNING: Using random model weights!")
print("β All predictions will be random")
print(f"β Expected model files in: {self.model_dir}/")
print("β Required files:")
print(" - model_state_dict.pt (recommended)")
print(" - model_quantized_state_dict.pt (alternative)")
print(" - best_model.pt (alternative)")
else:
print(f"β
Model ready with trained weights")
# Wrap in inference model with thresholds
self.model = OptimizedInferenceModel(
base_model,
self.config['target_symptoms'],
self.config['confidence_thresholds']
)
self.model.eval()
# CPU optimization
torch.set_num_threads(4)
except Exception as e:
raise RuntimeError(f"Failed to create/load model: {str(e)}")
def setup_preprocessor(self):
"""Initialize audio preprocessor"""
self.preprocessor = RespiratoryAudioPreprocessor()
print("β
Audio preprocessor initialized")
def predict_symptoms(self, audio_file_path: str) -> Dict[str, Any]:
"""Predict respiratory symptoms"""
try:
start_time = time.time()
# Preprocess audio
tensor_input = self.preprocessor.preprocess_audio(audio_file_path)
preprocessing_time = time.time() - start_time
# Run inference
inference_start = time.time()
with torch.no_grad():
outputs = self.model(tensor_input)
inference_time = time.time() - inference_start
# Parse outputs
probabilities = outputs['probabilities'].squeeze().detach().cpu().numpy()
# Convert numpy types to Python types
probabilities = probabilities.astype(float).tolist()
# Detect symptoms
detected_symptoms = []
for i, symptom in enumerate(self.config['target_symptoms']):
prob = float(probabilities[i])
threshold = float(self.config['confidence_thresholds'][symptom])
effective_threshold = max(threshold, self.neutral_threshold)
if prob >= effective_threshold:
detected_symptoms.append({
'symptom': symptom,
'display_name': self.config['symptom_display_names'][symptom],
'confidence': prob,
'color': self.config['symptom_colors'][symptom],
'threshold_used': effective_threshold
})
# Determine health status
max_confidence = max(probabilities)
if not detected_symptoms:
if max_confidence < self.neutral_threshold:
health_status = "healthy"
status_message = "No symptoms detected - appears healthy"
else:
health_status = "inconclusive"
status_message = "Some patterns detected but below confidence threshold"
else:
health_status = "symptoms_detected"
status_message = f"{len(detected_symptoms)} symptom(s) detected"
# Format results
results = {
'detected_symptoms': detected_symptoms,
'all_symptoms': {},
'summary': {
'total_detected': len(detected_symptoms),
'highest_confidence': max([s['confidence'] for s in detected_symptoms], default=0.0),
'max_overall_confidence': float(max_confidence),
'status': health_status,
'status_message': status_message,
'neutral_threshold': float(self.neutral_threshold),
'weights_status': 'trained' if self.weights_loaded else 'random'
},
'recommendations': self._get_recommendations(health_status, detected_symptoms),
'health_classification': health_status,
'processing_info': {
'preprocessing_time_ms': round(preprocessing_time * 1000, 1),
'inference_time_ms': round(inference_time * 1000, 1),
'total_time_ms': round((preprocessing_time + inference_time) * 1000, 1),
'model_weights_loaded': self.weights_loaded,
'model_version': '3.0_39percent_f1'
}
}
# Add all symptoms details
for i, symptom in enumerate(self.config['target_symptoms']):
prob = float(probabilities[i])
threshold = float(self.config['confidence_thresholds'][symptom])
effective_threshold = max(threshold, self.neutral_threshold)
results['all_symptoms'][symptom] = {
'display_name': self.config['symptom_display_names'][symptom],
'confidence': prob,
'detected': prob >= effective_threshold,
'original_threshold': threshold,
'effective_threshold': effective_threshold,
'color': self.config['symptom_colors'][symptom]
}
return results
except Exception as e:
raise HTTPException(status_code=500, detail=f"Prediction failed: {str(e)}")
def _get_recommendations(self, health_status, detected_symptoms):
"""Generate recommendations based on health status"""
recommendations = []
if not self.weights_loaded:
recommendations.append("β οΈ DEVELOPMENT MODE: Model using random weights - results not valid")
if health_status == "healthy":
recommendations.extend([
"β
No significant respiratory symptoms detected",
"Your cough patterns appear normal and healthy",
"Continue maintaining good respiratory health practices",
"This screening is for informational purposes only"
])
elif health_status == "inconclusive":
recommendations.extend([
"β οΈ Some respiratory patterns detected but below confidence threshold",
"Consider monitoring your symptoms over the next few days",
"If symptoms persist or worsen, consult a healthcare provider",
"This AI screening should not replace professional medical advice"
])
elif len(detected_symptoms) == 1:
symptom_name = detected_symptoms[0]['display_name']
confidence = detected_symptoms[0]['confidence']
recommendations.extend([
f"π Detected: {symptom_name} (confidence: {confidence:.1%})",
"Monitor this symptom and note any changes",
"Consider consulting a healthcare provider if symptoms persist",
"This AI screening should not replace professional medical advice"
])
else:
symptom_names = [s['display_name'] for s in detected_symptoms]
recommendations.extend([
f"π¨ Multiple symptoms detected: {', '.join(symptom_names)}",
"Multiple symptoms may indicate a need for medical attention",
"Please consult a healthcare provider for proper evaluation",
"This AI screening should not replace professional medical advice"
])
return recommendations
# Initialize service
print("π Initializing Respiratory Analysis Service v3.0...")
try:
service = RespiratoryAnalysisService()
print("β
Service initialized successfully!")
print(f" Model: 39% F1-Macro (4 symptoms)")
print(f" Weights loaded: {'Yes' if service.weights_loaded else 'No'}")
except Exception as e:
print(f"β Service initialization failed: {str(e)}")
service = None
# =================== API ROUTES ===================
@app.get("/")
async def root():
"""Root endpoint"""
if service is None:
return {"service": "Respiratory Symptom Analysis API", "version": "3.0.0", "status": "error"}
return {
"service": "Respiratory Symptom Analysis API",
"version": "3.0.0",
"model_version": "39% F1-Macro (4 symptoms)",
"status": "active",
"model_status": "trained_weights" if service.weights_loaded else "random_weights",
"supported_symptoms": service.config['target_symptoms'],
"endpoints": {
"analyze": "/analyze",
"health": "/health",
"info": "/info",
"docs": "/docs"
}
}
@app.get("/health")
async def health_check():
"""Health check endpoint"""
model_files_status = {
"model_base": (Path("deployment_model") / "model_base.pt").exists(),
"model_inference": (Path("deployment_model") / "model_inference.pt").exists(),
"model_quantized": (Path("deployment_model") / "model_quantized.pt").exists(),
"model_torchscript": (Path("deployment_model") / "model_torchscript.pt").exists(),
"config": (Path("deployment_model") / "model_config.json").exists()
}
return {
"status": "healthy" if service is not None else "unhealthy",
"timestamp": time.time(),
"service_ready": service is not None,
"model_loaded": service.model is not None if service else False,
"model_weights_status": "trained" if (service and service.weights_loaded) else "random",
"model_files_available": model_files_status,
"api_version": "3.0.0"
}
@app.get("/info")
async def get_info():
"""Get model information"""
if service is None:
return {"error": "Service not initialized"}
return {
"model_info": {
"version": "3.0_39percent_f1",
"architecture": "LightweightMultiSymptomClassifier (no CBAM)",
"target_symptoms": service.config['target_symptoms'],
"symptom_display_names": service.config['symptom_display_names'],
"confidence_thresholds": service.config['confidence_thresholds'],
"weights_loaded": service.weights_loaded,
"neutral_threshold": service.neutral_threshold
},
"preprocessing_info": service.preprocessor.get_preprocessing_info(),
"supported_formats": ["wav", "mp3", "flac", "ogg", "m4a", "webm"],
"max_duration": "30 seconds",
"max_file_size": "10MB",
"api_version": "3.0.0"
}
@app.post("/analyze")
async def analyze_audio(audio_file: UploadFile = File(...)):
"""
Analyze audio file for respiratory symptoms
Returns detected symptoms with confidence scores and health classification
"""
if service is None:
raise HTTPException(status_code=503, detail="Service not available")
# Validate file type
allowed_types = ['audio/wav', 'audio/mpeg', 'audio/mp3', 'audio/flac',
'audio/ogg', 'audio/x-m4a', 'audio/mp4', 'audio/webm']
if audio_file.content_type not in allowed_types:
raise HTTPException(status_code=400,
detail=f"Unsupported format: {audio_file.content_type}")
# Validate file size
content = await audio_file.read()
if len(content) > 10 * 1024 * 1024: # 10MB
raise HTTPException(status_code=400, detail="File too large. Maximum: 10MB")
try:
# Save uploaded file temporarily
file_extension = audio_file.filename.split('.')[-1] if audio_file.filename else 'wav'
with tempfile.NamedTemporaryFile(delete=False, suffix=f".{file_extension}") as temp_file:
temp_file.write(content)
temp_file_path = temp_file.name
# Analyze audio
results = service.predict_symptoms(temp_file_path)
# Clean up
os.unlink(temp_file_path)
return JSONResponse(
status_code=200,
content={
"success": True,
"data": results,
"metadata": {
"filename": audio_file.filename,
"file_size_bytes": len(content),
"content_type": audio_file.content_type,
"timestamp": time.time(),
"api_version": "3.0.0"
}
}
)
except Exception as e:
if 'temp_file_path' in locals():
try:
os.unlink(temp_file_path)
except:
pass
raise HTTPException(status_code=500, detail=f"Analysis failed: {str(e)}")
if __name__ == "__main__":
import uvicorn
uvicorn.run("main:app", host="0.0.0.0", port=7860, reload=False)
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