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tiger / tiger.py

Commit History

Merge branch 'main' of https://huggingface.co/spaces/Knowles-Lab/tiger into main
6009ef4

astirn commited on

flip guide sequences for biologists
8c452e8

astirn commited on

Cleaning up previous fasta files
9f169cd

ericckim03 commited on

enable status bar
89ee386

ericckim03 commited on

missed fix
6216d88

astirn commited on

memory leak plugged
0450f78

astirn commited on

corrections
6727689

astirn commited on

fasta directory optimizations
f311bf4

astirn commited on

support for app
89ffb34

astirn commited on

find top guides for all transcripts and then scan off-targets simultaneously
f57c1f6

astirn commited on

load_transcripts function
d78d0d1

astirn commited on

off-targets for gencode.v19.lncRNA_transcripts.fa.gz
e38af10

astirn commited on

insufficient target context cases handled
a690e02

astirn commited on

back to old test case
cbbf8c9

astirn commited on

len = 26 bug
1e16292

astirn commited on

no off-target bug
350befe

astirn commited on

sorted off-target
6ec253f

astirn commited on

cleanup
3a14dfb

astirn commited on

cleanup
18c6cc8

astirn commited on

rounding error
73c24bb

astirn commited on

off-target predictions
de06d10

astirn commited on

cleanup
4e66e6b

astirn commited on

use zipped fasta file
5fc4e72

astirn commited on

off target scanning
1ef81e0

astirn commited on

modularized functions
eac7d3f

astirn commited on

off-target model with guide sequence utilization
457a981

astirn commited on

context len added
59874d6

astirn commited on

tensorflow tokenizer
34274e5

astirn commited on

cleanup and test cases
814d067

astirn commited on