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tiger

Commit History

support for app
89ffb34

astirn commited on

find top guides for all transcripts and then scan off-targets simultaneously
f57c1f6

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load_transcripts function
d78d0d1

astirn commited on

Upload gencode.v19.lncRNA_transcripts.fa.gz
82425ea

astirn commited on

off-targets for gencode.v19.lncRNA_transcripts.fa.gz
e38af10

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insufficient target context cases handled
a690e02

astirn commited on

back to old test case
cbbf8c9

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len = 26 bug
1e16292

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no off-target bug
350befe

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sorted off-target
6ec253f

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cleanup
3a14dfb

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cleanup
18c6cc8

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rounding error
73c24bb

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MVP
d41b7db

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off-target predictions
de06d10

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cleanup
2bc5b93

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cleanup
4e66e6b

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default test case
592b51c

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added zipped fasta file
f7e003e

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use zipped fasta file
5fc4e72

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track transcripts directory
2694c1b

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off target scanning
1ef81e0

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modularized functions
eac7d3f

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off-target model with guide sequence utilization
457a981

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context len added
a1b3810

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context len added
59874d6

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tensorflow tokenizer
34274e5

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cleanup
610b0ca

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cleanup
44f0ad0

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cleanup
78951dd

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cleanup and test cases
814d067

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cleanup
cb8c873

astirn commited on

let's try something
f606ed7

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let's try something
8134cc8

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cleanup
77e4f1f

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cleanup
33f693d

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cleanup
cf3bd3a

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bug fix
f04eae6

astirn commited on

updated README.md
6905b58

astirn commited on

manually merged latest tiger-exhibit files
54823be

astirn commited on

added requirements.txt
57dc36b

astirn commited on

fixed imports
0512a38

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added app and run
89be9f9

astirn commited on

added model
f6276d8

astirn commited on

initial commit
3e8b35b

astirn commited on