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tiger

Commit History

massive cleanup with better table columns
9ccfeb4

astirn commited on

tiger transform params
79470c2

astirn commited on

warning fix
d77f54b

astirn commited on

bug fix
81661d3

astirn commited on

bug fix
50f9a1a

astirn commited on

Merge remote-tracking branch 'origin/main' into unit-interval
d32c3b9

astirn commited on

cleanup
254e93b

astirn commited on

cleanup
7c87ab2

astirn commited on

progress
da98162

astirn commited on

web tool titration clipping slightly wider than testing
d99c64e

astirn commited on

moved titration ratio function to web code
47e7aeb

astirn commited on

progress
e78fda7

astirn commited on

progress
af865b9

astirn commited on

back to UnitVariance tiger_trainer.py
b8b2c54

astirn commited on

unit-interval tiger model with web tool output transformation
cf79aee

astirn commited on

Update README.md
84567e0

astirn commited on

updated .gitignore
ecfb07a

astirn commited on

minor fix
fda1178

astirn commited on

ability to run locally
a2591b6

astirn commited on

Get rid of on target ID and rename guide
27992d2

ericckim03 commited on

prevent empty off target crash
c650039

ericckim03 commited on

Merge branch 'main' of https://huggingface.co/spaces/Knowles-Lab/tiger into main
56f2fde

ericckim03 commited on

prevent crash when off target is empty and add option for on target only
99a0d01

ericckim03 commited on

Merge branch 'main' of https://huggingface.co/spaces/Knowles-Lab/tiger into main
6009ef4

astirn commited on

flip guide sequences for biologists
8c452e8

astirn commited on

Cleaning up previous fasta files
9f169cd

ericckim03 commited on

Handle fasta file input seperately
d3204b1

ericckim03 commited on

enable status bar
89ee386

ericckim03 commited on

missed fix
6216d88

astirn commited on

updated .gitignore
e0618e1

astirn commited on

memory leak plugged
0450f78

astirn commited on

updated .gitignore
53c486e

astirn commited on

corrections
6727689

astirn commited on

fasta directory optimizations
f311bf4

astirn commited on

support for app
89ffb34

astirn commited on

find top guides for all transcripts and then scan off-targets simultaneously
f57c1f6

astirn commited on

load_transcripts function
d78d0d1

astirn commited on

Upload gencode.v19.lncRNA_transcripts.fa.gz
82425ea

astirn commited on

off-targets for gencode.v19.lncRNA_transcripts.fa.gz
e38af10

astirn commited on

insufficient target context cases handled
a690e02

astirn commited on

back to old test case
cbbf8c9

astirn commited on

len = 26 bug
1e16292

astirn commited on

no off-target bug
350befe

astirn commited on

sorted off-target
6ec253f

astirn commited on

cleanup
3a14dfb

astirn commited on

cleanup
18c6cc8

astirn commited on

rounding error
73c24bb

astirn commited on

MVP
d41b7db

astirn commited on

off-target predictions
de06d10

astirn commited on

cleanup
2bc5b93

astirn commited on