Kung-Hsun commited on
Commit
ef16675
·
verified ·
1 Parent(s): 235e68e

Update app.py

Browse files
Files changed (1) hide show
  1. app.py +1 -1
app.py CHANGED
@@ -58,7 +58,7 @@ def calc_features(df, fp_types, desc_types, smartbox):
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  if 'maccs' in fp_types:
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  df['maccs'] = df['smiles'].apply(lambda s: np.array(MACCSkeys.GenMACCSKeys(Chem.MolFromSmiles(s))) if Chem.MolFromSmiles(s) else np.zeros(167))
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  if 'rdkitfp' in fp_types:
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- df['rdkitfp'] = df['smiles'].apply(lambda s: np.array(rdMolDescriptors.GetRDKitFingerprintAsBitVect(Chem.MolFromSmiles(s), maxPath=5)) if Chem.MolFromSmiles(s) else np.zeros(2048))
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  for desc in desc_types:
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  try:
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  if hasattr(Descriptors, desc):
 
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  if 'maccs' in fp_types:
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  df['maccs'] = df['smiles'].apply(lambda s: np.array(MACCSkeys.GenMACCSKeys(Chem.MolFromSmiles(s))) if Chem.MolFromSmiles(s) else np.zeros(167))
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  if 'rdkitfp' in fp_types:
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+ df['rdkitfp'] = df['smiles'].apply(lambda s: np.array(Chem.RDKFingerprint(Chem.MolFromSmiles(s), maxPath=5)) if Chem.MolFromSmiles(s) else np.zeros(2048))
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  for desc in desc_types:
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  try:
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  if hasattr(Descriptors, desc):