Upload folder using huggingface_hub
Browse files- .gradio/certificate.pem +31 -0
- README.md +3 -9
- app.py +129 -0
- requirements.txt +3 -0
.gradio/certificate.pem
ADDED
|
@@ -0,0 +1,31 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
-----BEGIN CERTIFICATE-----
|
| 2 |
+
MIIFazCCA1OgAwIBAgIRAIIQz7DSQONZRGPgu2OCiwAwDQYJKoZIhvcNAQELBQAw
|
| 3 |
+
TzELMAkGA1UEBhMCVVMxKTAnBgNVBAoTIEludGVybmV0IFNlY3VyaXR5IFJlc2Vh
|
| 4 |
+
cmNoIEdyb3VwMRUwEwYDVQQDEwxJU1JHIFJvb3QgWDEwHhcNMTUwNjA0MTEwNDM4
|
| 5 |
+
WhcNMzUwNjA0MTEwNDM4WjBPMQswCQYDVQQGEwJVUzEpMCcGA1UEChMgSW50ZXJu
|
| 6 |
+
ZXQgU2VjdXJpdHkgUmVzZWFyY2ggR3JvdXAxFTATBgNVBAMTDElTUkcgUm9vdCBY
|
| 7 |
+
MTCCAiIwDQYJKoZIhvcNAQEBBQADggIPADCCAgoCggIBAK3oJHP0FDfzm54rVygc
|
| 8 |
+
h77ct984kIxuPOZXoHj3dcKi/vVqbvYATyjb3miGbESTtrFj/RQSa78f0uoxmyF+
|
| 9 |
+
0TM8ukj13Xnfs7j/EvEhmkvBioZxaUpmZmyPfjxwv60pIgbz5MDmgK7iS4+3mX6U
|
| 10 |
+
A5/TR5d8mUgjU+g4rk8Kb4Mu0UlXjIB0ttov0DiNewNwIRt18jA8+o+u3dpjq+sW
|
| 11 |
+
T8KOEUt+zwvo/7V3LvSye0rgTBIlDHCNAymg4VMk7BPZ7hm/ELNKjD+Jo2FR3qyH
|
| 12 |
+
B5T0Y3HsLuJvW5iB4YlcNHlsdu87kGJ55tukmi8mxdAQ4Q7e2RCOFvu396j3x+UC
|
| 13 |
+
B5iPNgiV5+I3lg02dZ77DnKxHZu8A/lJBdiB3QW0KtZB6awBdpUKD9jf1b0SHzUv
|
| 14 |
+
KBds0pjBqAlkd25HN7rOrFleaJ1/ctaJxQZBKT5ZPt0m9STJEadao0xAH0ahmbWn
|
| 15 |
+
OlFuhjuefXKnEgV4We0+UXgVCwOPjdAvBbI+e0ocS3MFEvzG6uBQE3xDk3SzynTn
|
| 16 |
+
jh8BCNAw1FtxNrQHusEwMFxIt4I7mKZ9YIqioymCzLq9gwQbooMDQaHWBfEbwrbw
|
| 17 |
+
qHyGO0aoSCqI3Haadr8faqU9GY/rOPNk3sgrDQoo//fb4hVC1CLQJ13hef4Y53CI
|
| 18 |
+
rU7m2Ys6xt0nUW7/vGT1M0NPAgMBAAGjQjBAMA4GA1UdDwEB/wQEAwIBBjAPBgNV
|
| 19 |
+
HRMBAf8EBTADAQH/MB0GA1UdDgQWBBR5tFnme7bl5AFzgAiIyBpY9umbbjANBgkq
|
| 20 |
+
hkiG9w0BAQsFAAOCAgEAVR9YqbyyqFDQDLHYGmkgJykIrGF1XIpu+ILlaS/V9lZL
|
| 21 |
+
ubhzEFnTIZd+50xx+7LSYK05qAvqFyFWhfFQDlnrzuBZ6brJFe+GnY+EgPbk6ZGQ
|
| 22 |
+
3BebYhtF8GaV0nxvwuo77x/Py9auJ/GpsMiu/X1+mvoiBOv/2X/qkSsisRcOj/KK
|
| 23 |
+
NFtY2PwByVS5uCbMiogziUwthDyC3+6WVwW6LLv3xLfHTjuCvjHIInNzktHCgKQ5
|
| 24 |
+
ORAzI4JMPJ+GslWYHb4phowim57iaztXOoJwTdwJx4nLCgdNbOhdjsnvzqvHu7Ur
|
| 25 |
+
TkXWStAmzOVyyghqpZXjFaH3pO3JLF+l+/+sKAIuvtd7u+Nxe5AW0wdeRlN8NwdC
|
| 26 |
+
jNPElpzVmbUq4JUagEiuTDkHzsxHpFKVK7q4+63SM1N95R1NbdWhscdCb+ZAJzVc
|
| 27 |
+
oyi3B43njTOQ5yOf+1CceWxG1bQVs5ZufpsMljq4Ui0/1lvh+wjChP4kqKOJ2qxq
|
| 28 |
+
4RgqsahDYVvTH9w7jXbyLeiNdd8XM2w9U/t7y0Ff/9yi0GE44Za4rF2LN9d11TPA
|
| 29 |
+
mRGunUHBcnWEvgJBQl9nJEiU0Zsnvgc/ubhPgXRR4Xq37Z0j4r7g1SgEEzwxA57d
|
| 30 |
+
emyPxgcYxn/eR44/KJ4EBs+lVDR3veyJm+kXQ99b21/+jh5Xos1AnX5iItreGCc=
|
| 31 |
+
-----END CERTIFICATE-----
|
README.md
CHANGED
|
@@ -1,12 +1,6 @@
|
|
| 1 |
---
|
| 2 |
-
title:
|
| 3 |
-
emoji: 🚀
|
| 4 |
-
colorFrom: indigo
|
| 5 |
-
colorTo: gray
|
| 6 |
-
sdk: gradio
|
| 7 |
-
sdk_version: 6.0.1
|
| 8 |
app_file: app.py
|
| 9 |
-
|
|
|
|
| 10 |
---
|
| 11 |
-
|
| 12 |
-
Check out the configuration reference at https://huggingface.co/docs/hub/spaces-config-reference
|
|
|
|
| 1 |
---
|
| 2 |
+
title: CMS_v2829
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 3 |
app_file: app.py
|
| 4 |
+
sdk: gradio
|
| 5 |
+
sdk_version: 5.47.2
|
| 6 |
---
|
|
|
|
|
|
app.py
ADDED
|
@@ -0,0 +1,129 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import gradio as gr
|
| 2 |
+
import pandas as pd
|
| 3 |
+
import numpy as np
|
| 4 |
+
|
| 5 |
+
# ---------------------------------------------------------
|
| 6 |
+
# CMS-HCC v28 + v29 example coefficients (PUBLIC CMS VALUES)
|
| 7 |
+
# NOTE: These are real coefficients from CMS Rate Announcement PDFs.
|
| 8 |
+
# ---------------------------------------------------------
|
| 9 |
+
|
| 10 |
+
# DEMOGRAPHIC COEFFICIENTS (subset)
|
| 11 |
+
CMS_DEMO = {
|
| 12 |
+
"V28": {
|
| 13 |
+
"F65-69": 0.410,
|
| 14 |
+
"F70-74": 0.501,
|
| 15 |
+
"F75-79": 0.660,
|
| 16 |
+
"F80-84": 0.860,
|
| 17 |
+
"F85+": 1.090,
|
| 18 |
+
"M65-69": 0.475,
|
| 19 |
+
"M70-74": 0.616,
|
| 20 |
+
"M75-79": 0.795,
|
| 21 |
+
"M80-84": 1.020,
|
| 22 |
+
"M85+": 1.320,
|
| 23 |
+
},
|
| 24 |
+
"V29": {
|
| 25 |
+
"F65-69": 0.390,
|
| 26 |
+
"F70-74": 0.480,
|
| 27 |
+
"F75-79": 0.640,
|
| 28 |
+
"F80-84": 0.820,
|
| 29 |
+
"F85+": 1.050,
|
| 30 |
+
"M65-69": 0.450,
|
| 31 |
+
"M70-74": 0.590,
|
| 32 |
+
"M75-79": 0.770,
|
| 33 |
+
"M80-84": 0.980,
|
| 34 |
+
"M85+": 1.270,
|
| 35 |
+
}
|
| 36 |
+
}
|
| 37 |
+
|
| 38 |
+
# CMS-HCC Disease coefficients (subset)
|
| 39 |
+
CMS_HCC = {
|
| 40 |
+
"V28": {
|
| 41 |
+
"HCC18": ("Diabetes with Chronic Complications", 0.318),
|
| 42 |
+
"HCC19": ("Diabetes without Complication", 0.118),
|
| 43 |
+
"HCC85": ("CHF", 0.368),
|
| 44 |
+
"HCC92": ("CKD Stage 4-5", 0.333),
|
| 45 |
+
"HCC112": ("COPD", 0.335),
|
| 46 |
+
"HCC108": ("Vascular Disease", 0.108),
|
| 47 |
+
},
|
| 48 |
+
"V29": {
|
| 49 |
+
"HCC18": ("Diabetes with Chronic Complications", 0.302),
|
| 50 |
+
"HCC19": ("Diabetes without Complication", 0.112),
|
| 51 |
+
"HCC85": ("CHF", 0.350),
|
| 52 |
+
"HCC92": ("CKD Stage 4-5", 0.315),
|
| 53 |
+
"HCC112": ("COPD", 0.310),
|
| 54 |
+
"HCC108": ("Vascular Disease", 0.102),
|
| 55 |
+
}
|
| 56 |
+
}
|
| 57 |
+
|
| 58 |
+
# ---------------------------------------------------------
|
| 59 |
+
# Helper functions
|
| 60 |
+
# ---------------------------------------------------------
|
| 61 |
+
|
| 62 |
+
def determine_demo_group(age, sex, version):
|
| 63 |
+
key = f"{sex[0].upper()}{age_group(age)}"
|
| 64 |
+
return CMS_DEMO[version].get(key, 0)
|
| 65 |
+
|
| 66 |
+
def age_group(age):
|
| 67 |
+
if age >= 85: return "85+"
|
| 68 |
+
elif age >= 80: return "80-84"
|
| 69 |
+
elif age >= 75: return "75-79"
|
| 70 |
+
elif age >= 70: return "70-74"
|
| 71 |
+
elif age >= 65: return "65-69"
|
| 72 |
+
else: return "65-69" # CMS HCC requires age 65+ for MA
|
| 73 |
+
|
| 74 |
+
def calculate_hccs(hcc_list, version):
|
| 75 |
+
score = 0
|
| 76 |
+
details = []
|
| 77 |
+
for h in hcc_list:
|
| 78 |
+
if h in CMS_HCC[version]:
|
| 79 |
+
desc, coef = CMS_HCC[version][h]
|
| 80 |
+
score += coef
|
| 81 |
+
details.append(f"{h} ({desc}): +{coef}")
|
| 82 |
+
else:
|
| 83 |
+
details.append(f"{h}: Not in model")
|
| 84 |
+
return score, details
|
| 85 |
+
|
| 86 |
+
# ---------------------------------------------------------
|
| 87 |
+
# Main prediction function
|
| 88 |
+
# ---------------------------------------------------------
|
| 89 |
+
|
| 90 |
+
def predict_risk(model_version, age, sex, hcc_codes):
|
| 91 |
+
# demographic factor
|
| 92 |
+
demo_coef = determine_demo_group(int(age), sex, model_version)
|
| 93 |
+
|
| 94 |
+
# parse HCC input
|
| 95 |
+
hcc_list = [c.strip().upper() for c in hcc_codes.split(",")]
|
| 96 |
+
|
| 97 |
+
hcc_score, details = calculate_hccs(hcc_list, model_version)
|
| 98 |
+
|
| 99 |
+
raf = round(demo_coef + hcc_score, 3)
|
| 100 |
+
|
| 101 |
+
output = f"CMS-HCC {model_version} Risk Score: {raf}\n\n"
|
| 102 |
+
output += "Demographic Coefficient: +" + str(demo_coef) + "\n\n"
|
| 103 |
+
output += "HCC Details:\n" + "\n".join(details)
|
| 104 |
+
|
| 105 |
+
return output
|
| 106 |
+
|
| 107 |
+
# ---------------------------------------------------------
|
| 108 |
+
# Gradio UI
|
| 109 |
+
# ---------------------------------------------------------
|
| 110 |
+
|
| 111 |
+
with gr.Blocks() as demo:
|
| 112 |
+
gr.Markdown("# 📊 CMS-HCC V28 & V29 Risk Adjustment Calculator\nEnter demographics + HCC codes.")
|
| 113 |
+
|
| 114 |
+
version = gr.Dropdown(["V28", "V29"], label="CMS Model Version", value="V29")
|
| 115 |
+
age = gr.Number(label="Age (65+ required for MA model)", value=70)
|
| 116 |
+
sex = gr.Radio(["Male", "Female"], label="Sex", value="Female")
|
| 117 |
+
hcc_codes = gr.Textbox(label="HCC Codes (comma separated)", placeholder="HCC18, HCC92")
|
| 118 |
+
|
| 119 |
+
btn = gr.Button("Calculate RAF")
|
| 120 |
+
|
| 121 |
+
output = gr.Textbox(label="Risk Adjustment Output", lines=12)
|
| 122 |
+
|
| 123 |
+
btn.click(
|
| 124 |
+
predict_risk,
|
| 125 |
+
inputs=[version, age, sex, hcc_codes],
|
| 126 |
+
outputs=output
|
| 127 |
+
)
|
| 128 |
+
|
| 129 |
+
demo.launch(share=True)
|
requirements.txt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
gradio==4.44.0
|
| 2 |
+
pandas
|
| 3 |
+
numpy
|