Spaces:
Sleeping
Sleeping
File size: 17,887 Bytes
8290f6d 458095e 8290f6d 458095e 8290f6d 204052f 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d b6175f7 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e 8290f6d 458095e | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 | import gradio as gr
import cv2
import numpy as np
import io
from PIL import Image, ImageDraw, ImageFont
import matplotlib
matplotlib.use("Agg")
import matplotlib.pyplot as plt
# βββ Font paths βββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
FONT_BOLD = "/usr/share/fonts/truetype/dejavu/DejaVuSans-Bold.ttf"
FONT_REGULAR = "/usr/share/fonts/truetype/dejavu/DejaVuSans.ttf"
def _font(size, bold=True):
try:
return ImageFont.truetype(FONT_BOLD if bold else FONT_REGULAR, size)
except Exception:
return ImageFont.load_default()
# βββ Colours (R,G,B) ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
C_VIOLET = (124, 58, 237)
C_VIOLET_DARK = ( 91, 33, 182)
C_VIOLET_LITE = (237, 233, 254)
C_TEAL = ( 13, 148, 136)
C_TEAL_LITE = (204, 251, 241)
C_AMBER = (217, 119, 6)
C_AMBER_LITE = (254, 243, 199)
C_ROSE = (225, 29, 72)
C_ROSE_LITE = (255, 228, 230)
C_SLATE = ( 30, 41, 59)
C_SLATE_MID = (100, 116, 139)
C_SLATE_LITE = (241, 245, 249)
C_WHITE = (255, 255, 255)
C_BLACK = ( 0, 0, 0)
C_RED = (220, 38, 38)
C_BG = (255, 255, 255) # page background
# βββ Cellpose model (lazy) ββββββββββββββββββββββββββββββββββββββββββββββββββββ
_model = None
def get_model():
global _model
if _model is None:
from cellpose import models
from huggingface_hub import hf_hub_download
fpath = hf_hub_download(repo_id="mouseland/cellpose-sam", filename="cpsam")
_model = models.CellposeModel(gpu=False, pretrained_model=fpath)
return _model
# βββ Image helpers ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
def normalize99(img):
X = img.copy().astype(np.float32)
p1, p99 = np.percentile(X, 1), np.percentile(X, 99)
return (X - p1) / (1e-10 + p99 - p1)
def image_resize(img, resize=1000):
ny, nx = img.shape[:2]
if max(ny, nx) > resize:
if ny > nx:
nx = int(nx / ny * resize); ny = resize
else:
ny = int(ny / nx * resize); nx = resize
img = cv2.resize(img, (nx, ny))
return img.astype(np.uint8)
def run_cellpose(img, model, max_iter=250, flow_threshold=0.4, cellprob_threshold=0.0):
masks, flows, _ = model.eval(
img, niter=max_iter,
flow_threshold=flow_threshold,
cellprob_threshold=cellprob_threshold,
)
return masks, flows
def build_outline_image(img, masks) -> Image.Image:
img_n = np.clip(normalize99(img), 0, 1)
outpix = []
contours, _ = cv2.findContours(
masks.astype(np.int32), cv2.RETR_FLOODFILL, cv2.CHAIN_APPROX_SIMPLE
)
for c in contours:
if len(c.astype(int).squeeze()) > 4:
outpix.append(cv2.approxPolyDP(c, 0.001, True)[:, 0, :])
h, w = img_n.shape[:2]
figsize = (6, 6 * h / w) if w >= h else (6 * w / h, 6)
fig = plt.figure(figsize=figsize, facecolor="k")
ax = fig.add_axes([0, 0, 1, 1])
ax.set_xlim([0, w]); ax.set_ylim([0, h])
ax.imshow(img_n[::-1], origin="upper", aspect="auto")
for o in outpix:
ax.plot(o[:, 0], h - o[:, 1], color=[1, 0, 0], lw=1)
ax.axis("off")
buf = io.BytesIO()
fig.savefig(buf, format="png", bbox_inches="tight", pad_inches=0)
buf.seek(0)
out = Image.open(buf).copy()
plt.close(fig)
return out
# βββ Drawing helpers ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
def _text_size(draw, text, font):
"""Return (width, height) of text."""
bbox = draw.textbbox((0, 0), text, font=font)
return bbox[2] - bbox[0], bbox[3] - bbox[1]
def _draw_rect(img, x0, y0, x1, y1, fill, border=None, border_width=2, radius=0):
"""Draw a filled rectangle with optional border on a PIL Image."""
draw = ImageDraw.Draw(img)
if radius > 0:
draw.rounded_rectangle([x0, y0, x1, y1], radius=radius, fill=fill,
outline=border, width=border_width if border else 0)
else:
draw.rectangle([x0, y0, x1, y1], fill=fill,
outline=border, width=border_width if border else 0)
def _draw_text_centred(img, cx, cy, text, font, color):
draw = ImageDraw.Draw(img)
tw, th = _text_size(draw, text, font)
draw.text((cx - tw // 2, cy - th // 2), text, font=font, fill=color)
def _draw_text_left(img, x, cy, text, font, color):
draw = ImageDraw.Draw(img)
_, th = _text_size(draw, text, font)
draw.text((x, cy - th // 2), text, font=font, fill=color)
# βββ Report image builder βββββββββββββββββββββββββββββββββββββββββββββββββββββ
def build_report_image(segmented_pil: Image.Image, total_count: int) -> Image.Image:
"""
Renders the full report as a PIL Image with the same structure as the PDF:
β’ Header : MLBench + tagline + teal rule
β’ Body : [Grain Count Statistics table] | gap | [Segmentation Output image]
No footer line / page number.
"""
DPI = 150
PW_IN = 8.27 # A4 width in inches
PH_IN = 11.69 # A4 height in inches (we'll crop to content)
PW = int(PW_IN * DPI)
MARGIN = int(0.7 * DPI) # ~0.7 inch margin
# ββ Fonts βββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
f_logo_ml = _font(int(0.28 * DPI)) # "ML" large
f_logo_b = _font(int(0.28 * DPI)) # "Bench" same size
f_tagline = _font(int(0.09 * DPI), bold=False)
f_sec_hdr = _font(int(0.11 * DPI)) # section bar text
f_col_hdr = _font(int(0.09 * DPI)) # table column headers
f_label = _font(int(0.10 * DPI)) # row labels
f_val_total = _font(int(0.13 * DPI)) # total count value (bigger)
f_val = _font(int(0.10 * DPI)) # other value cells
# ββ Dimensions ββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
usable_w = PW - 2 * MARGIN
GAP = int(0.18 * DPI)
stat_w = int(usable_w * 0.43)
img_col_w = usable_w - stat_w - GAP
HDR_H = int(0.55 * DPI) # header area height
SEC_BAR_H = int(0.22 * DPI) # coloured section title bar
COL_HDR_H = int(0.18 * DPI) # table column header row
ROW_H = int(0.17 * DPI) # each data row
STRIPE_W = int(0.07 * DPI) # coloured left stripe on each row
TEAL_LINE = 3 # teal rule thickness
N_ROWS = 5
TABLE_H = COL_HDR_H + N_ROWS * ROW_H
# Total canvas height: margin + header + gap + sec_bar + content + margin
BODY_TOP = HDR_H + int(0.12 * DPI) # y where body starts
CONTENT_H = SEC_BAR_H + TABLE_H
CANVAS_H = BODY_TOP + CONTENT_H + MARGIN
# ββ Create canvas βββββββββββββββββββββββββββββββββββββββββββββββββββββ
img = Image.new("RGB", (PW, CANVAS_H), C_BG)
draw = ImageDraw.Draw(img)
# ββ Header ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
# "ML" in red, "Bench" in black
logo_y = int(HDR_H * 0.38)
ml_w, _ = _text_size(draw, "ML", f_logo_ml)
draw.text((MARGIN, logo_y), "ML", font=f_logo_ml, fill=C_RED)
draw.text((MARGIN + ml_w, logo_y), "Bench", font=f_logo_b, fill=C_BLACK)
# Tagline right-aligned
tag = "Rice Grain Analysis Report"
tag_w, tag_h = _text_size(draw, tag, f_tagline)
draw.text((PW - MARGIN - tag_w, logo_y + 6), tag, font=f_tagline, fill=C_SLATE_MID)
# Teal horizontal rule
rule_y = HDR_H - 4
draw.rectangle([0, rule_y, PW, rule_y + TEAL_LINE], fill=C_TEAL)
# ββ Section header bars βββββββββββββββββββββββββββββββββββββββββββββββ
stat_x = MARGIN
img_x = MARGIN + stat_w + GAP
stat_bar_y0 = BODY_TOP
stat_bar_y1 = BODY_TOP + SEC_BAR_H
# Teal bar β "Grain Count Statistics"
_draw_rect(img, stat_x, stat_bar_y0, stat_x + stat_w, stat_bar_y1, fill=C_TEAL)
_draw_text_centred(img, stat_x + stat_w // 2, (stat_bar_y0 + stat_bar_y1) // 2,
"Grain Count Statistics", f_sec_hdr, C_WHITE)
# Violet bar β "Segmentation Output"
_draw_rect(img, img_x, stat_bar_y0, img_x + img_col_w, stat_bar_y1, fill=C_VIOLET)
_draw_text_centred(img, img_x + img_col_w // 2, (stat_bar_y0 + stat_bar_y1) // 2,
"Segmentation Output", f_sec_hdr, C_WHITE)
# ββ Stats table βββββββββββββββββββββββββββββββββββββββββββββββββββββββ
table_top = BODY_TOP + SEC_BAR_H
col_hdr_y0 = table_top
col_hdr_y1 = table_top + COL_HDR_H
# Column header background
_draw_rect(img, stat_x, col_hdr_y0, stat_x + stat_w, col_hdr_y1, fill=C_SLATE)
cat_cx = stat_x + STRIPE_W + (stat_w - STRIPE_W) // 2 - int((stat_w - STRIPE_W) * 0.18)
count_cx = stat_x + STRIPE_W + int((stat_w - STRIPE_W) * 0.78)
_draw_text_centred(img, cat_cx, (col_hdr_y0 + col_hdr_y1) // 2, "Category", f_col_hdr, C_WHITE)
_draw_text_centred(img, count_cx, (col_hdr_y0 + col_hdr_y1) // 2, "Count", f_col_hdr, C_WHITE)
stat_rows_def = [
("Total Rice Grain", str(total_count), C_VIOLET, C_VIOLET_LITE),
("Long Grain", "β", C_TEAL, C_TEAL_LITE),
("Short Grain", "β", C_AMBER, C_AMBER_LITE),
("Half Grain", "β", C_ROSE, C_ROSE_LITE),
("Broken Edge", "β", C_SLATE_MID,C_SLATE_LITE),
]
border_color = (203, 213, 225)
grid_color = (226, 232, 240)
for i, (label, val, accent, bg) in enumerate(stat_rows_def):
ry0 = table_top + COL_HDR_H + i * ROW_H
ry1 = ry0 + ROW_H
cy = (ry0 + ry1) // 2
# Row background
_draw_rect(img, stat_x, ry0, stat_x + stat_w, ry1, fill=bg)
# Accent stripe
_draw_rect(img, stat_x, ry0, stat_x + STRIPE_W, ry1, fill=accent)
# Label
f_lbl = f_label
_draw_text_left(img, stat_x + STRIPE_W + 8, cy, label, f_lbl, C_SLATE)
# Value
f_v = f_val_total if i == 0 else f_val
c_v = C_VIOLET if i == 0 else C_SLATE
vw, _ = _text_size(draw, val, f_v)
draw.text((stat_x + stat_w - vw - 14, cy - _text_size(draw, val, f_v)[1] // 2),
val, font=f_v, fill=c_v)
# Horizontal grid line
draw.rectangle([stat_x, ry1 - 1, stat_x + stat_w, ry1], fill=grid_color)
# Outer border of table (column header + rows)
draw.rectangle([stat_x, col_hdr_y0, stat_x + stat_w,
table_top + COL_HDR_H + N_ROWS * ROW_H], outline=border_color, width=1)
# ββ Segmentation image ββββββββββββββββββββββββββββββββββββββββββββββββ
# Fit segmented image to exactly match table height (SEC_BAR already above)
target_h = TABLE_H # must match table area below sec bar
target_w = img_col_w
seg_np = np.array(segmented_pil)
ih, iw = seg_np.shape[:2]
scale = min(target_w / iw, target_h / ih)
new_w = int(iw * scale)
new_h = int(ih * scale)
seg_resized = segmented_pil.resize((new_w, new_h), Image.BICUBIC)
# Black background box β same height as table
box_x0 = img_x
box_y0 = table_top # align top with table (below sec bar)
box_x1 = img_x + img_col_w
box_y1 = table_top + TABLE_H
_draw_rect(img, box_x0, box_y0, box_x1, box_y1,
fill=C_BLACK, border=C_VIOLET, border_width=2)
# Centre the image inside the black box
paste_x = box_x0 + (img_col_w - new_w) // 2
paste_y = box_y0 + (TABLE_H - new_h) // 2
img.paste(seg_resized, (paste_x, paste_y))
return img
# βββ Sample example images ββββββββββββββββββββββββββββββββββββββββββββββββββββ
SAMPLE_PATHS = [
"kainat.jpg",
"c9.jpg"
]
# βββ Status helpers βββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
def make_status(level: str, message: str) -> dict:
icons = {"success": "β
", "warning": "β οΈ", "error": "β", "info": "βΉοΈ"}
icon = icons.get(level, "βΉοΈ")
return gr.update(value=f"{icon} {message}", visible=True)
# βββ Main processing ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
def process_image(pil_image):
# Returns: (report_image, status_update)
if pil_image is None:
return None, make_status("warning", "No image provided. Please upload or select a sample image first.")
try:
img_np = np.array(pil_image.convert("RGB"))
img_resized = image_resize(img_np, resize=1000)
model = get_model()
masks, _ = run_cellpose(img_resized, model)
total_count = int(masks.max())
if total_count == 0:
return None, make_status(
"warning",
"No rice grains were detected in this image. "
"Try a clearer photo or adjust the image contrast."
)
outline_pil = build_outline_image(img_resized, masks)
outline_pil = outline_pil.resize(
(img_resized.shape[1], img_resized.shape[0]), resample=Image.BICUBIC
)
report_img = build_report_image(outline_pil, total_count)
return (
report_img,
make_status("success", f"{total_count} rice grains detected. Report image shown on the right."),
)
except MemoryError:
return None, make_status("error", "Out of memory. Try uploading a smaller image.")
except Exception as e:
import traceback
traceback.print_exc()
return None, make_status("error", f"Unexpected error: {type(e).__name__}: {str(e)}")
# βββ UI βββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
THEME = gr.themes.Soft(
primary_hue="violet",
secondary_hue="indigo",
neutral_hue="slate",
font=gr.themes.GoogleFont("Inter"),
)
CSS = """
#run-btn { margin-top: 6px; }
#status-box textarea { font-size: 0.92rem; }
"""
with gr.Blocks(title="Rice Grain Counter") as demo:
gr.HTML("""
<div style="padding:18px 12px 10px 12px; background-color:#0F172A; border-radius:10px; margin-bottom:10px;">
<span style="font-size:2rem;font-weight:900;color:#F1F5F9;font-family:sans-serif;">
Rice Grain Counter
</span>
<p style="color:#CBD5E1;font-size:0.9rem;margin-top:4px;font-family:sans-serif;">
Upload a rice image to segment each grain and generate a report.
</p>
</div>
""")
with gr.Row(equal_height=False):
# ββ LEFT COLUMN βββββββββββββββββββββββββββββββββββββββββββββββββββ
with gr.Column(scale=1):
inp_image = gr.Image(type="pil", label="Upload Rice Image", height=270)
run_btn = gr.Button("π Analyse & Generate Report",
variant="primary", size="lg", elem_id="run-btn")
gr.Markdown("_Upload an image or click a sample below, then press **Analyse**._")
status_box = gr.Textbox(
label="Status",
value="",
interactive=False,
visible=False,
max_lines=3,
elem_id="status-box",
)
gr.Markdown("### Example Images _(click to load)_")
gr.Examples(
examples=[[p] for p in SAMPLE_PATHS],
inputs=inp_image,
label="",
examples_per_page=6,
)
# ββ RIGHT COLUMN ββββββββββββββββββββββββββββββββββββββββββββββββββ
with gr.Column(scale=1):
gr.Markdown("### Report")
report_out = gr.Image(
label="",
interactive=False,
)
run_btn.click(
fn=process_image,
inputs=[inp_image],
outputs=[report_out, status_box],
)
if __name__ == "__main__":
demo.launch(share=True, css=CSS) |