nusaibah0110 commited on
Commit
e5c33cd
·
1 Parent(s): cb3b2ec

Fix report structure: require all sections (biopsy, findings, diagnostics, management) with explicit formatting

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Files changed (1) hide show
  1. backend/app.py +66 -10
backend/app.py CHANGED
@@ -298,24 +298,80 @@ async def generate_report_endpoint(request: ReportGenerationRequest):
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  try:
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  # Use system prompt or default
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  system_prompt = request.system_prompt or """You are an expert colposcopy AI assistant acting as a specialist gynaecologist.
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- Analyse ALL the clinical data and the attached colposcopy images to generate a professional, evidence-based colposcopy report conclusion."""
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- # Build prompt with patient data and findings
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  prompt_parts = []
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- # Add patient data
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  prompt_parts.append("PATIENT DATA:")
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  prompt_parts.append(json.dumps(request.patient_data, indent=2))
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- # Add exam findings
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- prompt_parts.append("\nEXAMINATION FINDINGS:")
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  prompt_parts.append(json.dumps(request.exam_findings, indent=2))
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- # Add instruction
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- prompt_parts.append("\nBased on the above data, generate a professional colposcopy report with:")
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- prompt_parts.append("1. Summary of findings")
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- prompt_parts.append("2. Clinical impression")
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- prompt_parts.append("3. Recommendations")
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  full_prompt = "\n".join(prompt_parts)
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  try:
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  # Use system prompt or default
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  system_prompt = request.system_prompt or """You are an expert colposcopy AI assistant acting as a specialist gynaecologist.
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+ Generate comprehensive, structured colposcopy reports with ALL provided clinical data and examination findings."""
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+ # Build comprehensive structured prompt with all required sections
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  prompt_parts = []
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  prompt_parts.append("PATIENT DATA:")
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  prompt_parts.append(json.dumps(request.patient_data, indent=2))
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+ prompt_parts.append("\n\nEXAMINATION FINDINGS & OBSERVATIONS:")
 
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  prompt_parts.append(json.dumps(request.exam_findings, indent=2))
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+ prompt_parts.append("\n\n" + "="*80)
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+ prompt_parts.append("GENERATE A COMPLETE STRUCTURED COLPOSCOPY REPORT WITH ALL SECTIONS:")
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+ prompt_parts.append("="*80)
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+
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+ prompt_parts.append("""
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+
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+ ## 1. PATIENT DEMOGRAPHICS & CLINICAL HISTORY
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+ - Patient age, indication for colposcopy, relevant risk factors, HPV status, Pap smear results
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+ - Medical history including immunosuppression, smoking, sexual history
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+
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+ ## 2. COLPOSCOPY ADEQUACY ASSESSMENT
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+ - Transformation zone type (Type 1, 2, or 3)
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+ - Visibility of squamocolumnar junction (SCJ)
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+ - Any visual obstructions or examination limitations
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+
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+ ## 3. NATIVE VIEW FINDINGS
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+ - Cervical appearance, growths, contact bleeding, surface characteristics
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+ - Grossly visible lesions or abnormalities
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+ - General cervical health assessment
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+
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+ ## 4. ACETIC ACID APPLICATION FINDINGS
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+ - Acetowhite lesions (location, size, extent, characteristics)
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+ - Abnormal vascular patterns (punctuation, mosaicism, atypical vessels)
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+ - Size and distribution of acetowhite areas
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+ - Extent of disease if present
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+
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+ ## 5. LUGOL'S IODINE APPLICATION FINDINGS
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+ - Iodine non-staining areas and their locations
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+ - Staining patterns and significance
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+ - Areas not staining indicating possible dysplasia
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+
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+ ## 6. BIOPSY MARKING & FINDINGS
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+ - Specific locations of biopsies taken (if any)
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+ - Detailed descriptions of biopsied areas
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+ - Number of biopsies taken
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+ - Expected histologic findings or impression
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+
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+ ## 7. SWEDE SCORE (if applicable)
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+ - Major findings score
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+ - Minor findings assessment
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+ - Overall risk stratification
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+
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+ ## 8. DIAGNOSTIC IMPRESSION
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+ - Overall colposcopic impression (normal/CIN1/CIN2/3/cancer/other)
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+ - Adequacy of examination
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+ - Severity assessment if lesions present
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+ - Correlation with cytology and HPV status
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+
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+ ## 9. MANAGEMENT PLAN & RECOMMENDATIONS
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+ - Treatment recommendations (observation/colposcopy/LEEP/other)
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+ - Follow-up testing schedule (colposcopy timing, repeat cytology, HPV testing)
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+ - Biopsy management and expected next steps
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+ - Surveillance intervals based on findings
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+ - Patient counseling points
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+
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+ CRITICAL INSTRUCTIONS:
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+ - MUST include ALL 9 sections above
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+ - USE ALL patient data provided
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+ - INCLUDE ALL examination findings from the data
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+ - DO NOT consolidate or omit sections
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+ - DO NOT drop information to "recommendations only"
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+ - Provide detailed, clinical, evidence-based assessments
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+ - Format clearly with headers for each section""")
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  full_prompt = "\n".join(prompt_parts)
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