Update virtualhealth.py
Browse files- virtualhealth.py +33 -339
virtualhealth.py
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# -*- coding: utf-8 -*-
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"""VirtualHealth.ipynb
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Automatically generated by Colab.
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Original file is located at
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https://colab.research.google.com/drive/1yVSYiPz-WUlO7U0uAKe9LmfMXHd5eyAA
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"""
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!pip install streamlit
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import xgboost as xgb
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import pickle
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import numpy as np
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import pandas as pd
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model.load_model("symptom_disease_model.json")
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# Load the label encoder
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label_encoder = pickle.load(open("label_encoder.pkl", "rb"))
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# Load symptom names (from preprocessed training data)
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X_train = pd.read_csv("X_train.csv") # Get feature names
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symptom_list = X_train.columns.tolist()
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# Function to Predict Disease
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def predict_disease(user_symptoms):
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# Convert user symptoms into one-hot encoded format
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input_vector = np.zeros(len(symptom_list))
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for symptom in user_symptoms:
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if symptom in symptom_list:
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input_vector[symptom_list.index(symptom)] = 1
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input_vector = input_vector.reshape(1, -1) # Reshape for model
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# Predict disease (returns a numerical class)
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predicted_class = model.predict(input_vector)[0]
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# Convert number to disease name
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predicted_disease = label_encoder.inverse_transform([predicted_class])[0]
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return predicted_disease
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# Example Usage
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user_symptoms = ["itching", "skin_rash", "nodal_skin_eruptions"]
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predicted_disease = predict_disease(user_symptoms)
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print(f"Predicted Disease: {predicted_disease}")
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!pip install zipfile36
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import sys
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if sys.version_info >= (3, 6):
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import zipfile
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else:
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import zipfile36 as zipfile
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import os
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zip_file_path = '/content/disease symptom.zip' # Update with your path
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extracted_dir = '/content' # Where to extract the files
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with zipfile.ZipFile(zip_file_path, 'r') as zip_ref:
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zip_ref.extractall(extracted_dir)
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# Load the precaution dataset
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precaution_df = pd.read_csv("Disease precaution.csv")
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# Convert to dictionary for fast lookup
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precaution_dict = {}
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for _, row in precaution_df.iterrows():
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disease = row["Disease"].strip().lower()
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precautions = [row[f"Precaution_{i}"] for i in range(1, 5) if pd.notna(row[f"Precaution_{i}"])]
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precaution_dict[disease] = precautions
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# Function to Get Precautions
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def get_precautions(disease_name):
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disease_name = disease_name.strip().lower()
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return precaution_dict.get(disease_name, ["No precautions found"])
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# Example Usage
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precautions = get_precautions(predicted_disease)
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print(f"Precautions for {predicted_disease}: {precautions}")
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!pip install nltk
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import re
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import nltk
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from nltk.corpus import stopwords
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from nltk.tokenize import word_tokenize
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# Download stopwords
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nltk.download("stopwords")
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nltk.download("punkt")
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# Load English stopwords
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stop_words = set(stopwords.words("english"))
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nltk.download('punkt_tab')
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import xgboost as xgb
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import pickle
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import numpy as np
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import pandas as pd
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import torch
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from transformers import AutoTokenizer, AutoModelForQuestionAnswering
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import re # Import regex module for better input processing
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# ============================
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# 🔹 1. Load Pretrained Medical Q&A Model
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qa_model = AutoModelForQuestionAnswering.from_pretrained(qa_model_name)
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# ============================
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# 🔹 2. Load Symptom Checker Model
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# ============================
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# Load trained XGBoost model from JSON
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model = xgb.XGBClassifier()
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model.load_model("symptom_disease_model.json")
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# Load Corrected Label Encoder
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label_encoder = pickle.load(open("label_encoder.pkl", "rb"))
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# Load symptom names from training data
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X_train = pd.read_csv("X_train.csv") # Get feature names
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symptom_list = X_train.columns.tolist()
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# ============================
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medical_context = load_medical_context()
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# ============================
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# 🔹 5. Doctor Database
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# ============================
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doctor_database = {
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"malaria": [{"name": "Dr. Rajesh Kumar", "specialty": "Infectious Diseases", "location": "Apollo Hospital", "contact": "9876543210"}],
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"diabetes": [{"name": "Dr. Anil Mehta", "specialty": "Endocrinologist", "location": "AIIMS Delhi", "contact": "9876543233"}],
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"heart attack": [{"name": "Dr. Vikram Singh", "specialty": "Cardiologist", "location": "Medanta Hospital", "contact": "9876543255"}],
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"hepatitis e": [{"name": "Dr. Sunil Agarwal", "specialty": "Hepatologist", "location": "Fortis Hospital", "contact": "9876543266"}],
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"pneumonia": [{"name": "Dr. Priya Sharma", "specialty": "Pulmonologist", "location": "Max Healthcare", "contact": "9876543277"}],
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"heartattack": [{"name": "Dr. Vikram Singh", "specialty": "Cardiologist", "location": "Medanta Hospital", "contact": "9876543255"}],
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}
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# ============================
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# 🔹 6. Predict Disease from Symptoms
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# ============================
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def predict_disease(user_symptoms):
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"""Predicts
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input_vector = np.zeros(len(symptom_list))
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for symptom in user_symptoms:
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if symptom in symptom_list:
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input_vector[symptom_list.index(symptom)] = 1
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input_vector = input_vector.reshape(1, -1) # Reshape for model input
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# Predict disease (returns a numerical class)
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predicted_class = model.predict(input_vector)[0]
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# Convert number to disease name
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predicted_disease = label_encoder.inverse_transform([predicted_class])[0]
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return predicted_disease
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# ============================
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# 🔹 10. Handle User Queries
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# ============================
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def extract_treatment_from_context(disease):
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"""Extracts treatment details for a given disease from `medical_context.txt`."""
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with open("medical_context.txt", "r", encoding="utf-8") as file:
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lines = file.readlines()
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treatment_section = []
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found_disease = False
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found_treatment = False
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for line in lines:
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line = line.strip()
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# Check if we found the disease name
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if f"## {disease.lower()}" in line.lower():
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found_disease = True
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# If we found the disease, now look for "Treatment"
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if found_disease and "**Treatment**" in line:
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found_treatment = True
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continue # Skip the "**Treatment**:" line itself
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# If found, keep extracting treatment details
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if found_treatment:
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# Stop at blank line or the next section (## New Disease Name)
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if line == "" or line.startswith("## "):
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break
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treatment_section.append(line)
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return "\n".join(treatment_section) if treatment_section else None
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def extract_disease_name(user_query):
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"""Extracts the disease name by removing unnecessary words, but keeps medical terms."""
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user_query_cleaned = re.sub(r"[^\w\s]", "", user_query.lower()) # Remove punctuation
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words = word_tokenize(user_query_cleaned)
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# Remove stopwords but keep diseases/symptoms
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filtered_words = [word for word in words if word not in stop_words or word in common_symptoms]
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return " ".join(filtered_words).strip()
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def find_best_match(query, database):
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"""Finds the best matching disease from the database based on query words."""
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query_words = query.split() # Split query into words
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# Check for exact match first
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if query in database:
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return query # Exact match found
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# Check if any word in query exists in database keys
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for disease in database:
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for word in query_words:
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if word in disease: # Partial match found
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return disease
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return None # No match found
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def handle_user_query(user_query):
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"""Handles user queries related to symptoms, diseases, and doctor appointments."""
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user_query = user_query.lower().strip()
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#
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if "
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disease = predict_disease(symptoms.split(", ")) # Convert to list
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precautions = get_precautions(disease)
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return f"**Predicted Disease:** {disease}\n**Precautions:** {', '.join(precautions)}\n{book_appointment(disease)}"
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# Extract Disease Name for Queries
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user_query_cleaned = extract_disease_name(user_query)
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# Handle "Who should I see for..." Queries (Improved with Partial Matching)
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if "who should i see " in user_query:
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disease_query = user_query.replace("who should i see", "").strip()
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disease = find_best_match(disease_query, doctor_database) # Get best match
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if disease:
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doctor = doctor_database[disease][0]
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return f"You should see a **{doctor['specialty']}** for {disease}.\nExample: {doctor['name']} at {doctor['location']}."
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else:
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return "I'm not sure. Please consult a general physician for more guidance."
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# Book Appointment (Improved with Partial Matching)
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elif "book appointment" in user_query_cleaned:
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disease_query = user_query_cleaned.replace("book appointment", "").strip()
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disease = find_best_match(disease_query, doctor_database)
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return book_appointment(disease) if disease else "Sorry, no matching doctor found."
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# Symptoms Query
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elif "symptoms" in user_query_cleaned or "signs" in user_query_cleaned:
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disease = user_query_cleaned.replace("symptoms", "").replace("signs", "").strip()
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return get_medical_answer(f"What are the symptoms of {disease}?")
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#
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elif "
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disease =
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return "
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# Treatment Query
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if "treatment" in user_query_cleaned or "treat" in user_query_cleaned:
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disease = user_query_cleaned.replace("treatment", "").replace("treat", "").strip()
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return model_answer
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#
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else:
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if response in ["<s>", "", "No reliable answer found."]:
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return "I'm not sure, but you may consult a specialist for better guidance."
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return response
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# ============================
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# 🔹 11. Test Cases (Run Examples)
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# ============================
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print(handle_user_query("I have fever, chills, and muscle aches")) # Should predict disease & precautions
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print(handle_user_query("What are the symptoms of pneumonia?")) # Should return pneumonia symptoms
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print(handle_user_query("Book an appointment for diabetes")) # Should book a diabetes specialist
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print(handle_user_query("Who should I see for heart attack")) # Should return "Cardiologist"
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print(handle_user_query("what is the treatment for tuberculosis")) # Should return correct treatment
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print(handle_user_query("What is the treatment for tuberculosis?")) # Should return correct treatment
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print(handle_user_query("What is the treatment for malaria?")) # Should also work
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print(handle_user_query("What is the treatment for cancer?")) # Should return something useful
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print(handle_user_query("What is the treatment for tuberculosis?")) # Should return correct treatment
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print(handle_user_query("What is the treatment for malaria?")) # Should also work
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print(handle_user_query("What is the treatment for cancer?")) # Should return something useful
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print(handle_user_query("How to treat diabetes?")) # Should return proper treatment
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print(handle_user_query("Tell me the cure for pneumonia?")) # Should return treatment
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print(handle_user_query("Treatment for typhoid?")) # Should extract treatment
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print(handle_user_query("What are the symptoms of pneumonia?")) # Should return correct symptoms
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print(handle_user_query("Signs of heart attack?")) # Should return expected symptoms
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print(handle_user_query("How do I know if I have typhoid?")) # Should return typhoid symptoms
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print(handle_user_query("What symptoms should I check for tuberculosis?")) # Should work
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print(handle_user_query("Symptoms of dengue?")) # Should return symptoms of dengue
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print(handle_user_query("Who should I see for a heart attack?")) # Should return "Cardiologist"
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print(handle_user_query("Which doctor should I visit for diabetes?")) # Should return "Endocrinologist"
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print(handle_user_query("Who should I consult for a skin rash?")) # Should return "Dermatologist"
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print(handle_user_query("What kind of doctor treats pneumonia?")) # Should return "Pulmonologist"
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print(handle_user_query("Who specializes in treating migraines?")) # Should return "Neurologist"
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print(handle_user_query("Book an appointment for malaria")) # Should book doctor for malaria
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print(handle_user_query("I need a doctor for high blood pressure")) # Should book doctor for hypertension
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print(handle_user_query("Schedule a consultation for fever")) # Should book general physician
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print(handle_user_query("Find a doctor for diabetes treatment")) # Should book endocrinologist
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print(handle_user_query("Book an appointment for pneumonia treatment")) # Should book pulmonologist
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print(handle_user_query("I have fever, cough, and chills")) # Should predict disease correctly
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print(handle_user_query("Experiencing blurry vision and excessive thirst")) # Should return "Diabetes"
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print(handle_user_query("I am experiencing severe chest pain and difficulty breathing")) # Should return "Heart Attack"
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print(handle_user_query("Feeling tired, cold, and gaining weight")) # Should return "Hypothyroidism"
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print(handle_user_query("I have rash, joint pain, and headache")) # Should return "Dengue"
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print(handle_user_query("What does a doctor do?")) # Should return general doctor description
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print(handle_user_query("What are antibiotics?")) # Should explain antibiotics
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print(handle_user_query("How does the immune system work?")) # Should explain immunity
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print(handle_user_query("What is the function of the liver?")) # Should explain liver function
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print(handle_user_query("Explain how blood pressure works?")) # Should provide useful explanation
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# Commented out IPython magic to ensure Python compatibility.
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# %%writefile app.py
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# import streamlit as st
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# import requests
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#
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# st.set_page_config(page_title="AI Health Assistant", page_icon="🤖")
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#
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# st.title("🩺 AI Health Assistant")
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# st.write("Ask any medical-related questions:")
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#
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# # User Input
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# user_input = st.text_input("Your Question:")
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#
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# # Button to Send Query
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# if st.button("Ask"):
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# response = requests.post("https://b7da-35-232-247-117.ngrok-free.app/query/", json={"user_input": user_input})
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# bot_response = response.json().get("response", "Error fetching response")
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#
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# st.markdown(f"**🤖 Bot:** {bot_response}")
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#
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"""✅ Steps to Deploy on Hugging Face Spaces
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📌 Step 1: Create a Hugging Face Space
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1️⃣ Go to Hugging Face Spaces
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2️⃣ Click "New Space"
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3️⃣ Name the Space (e.g., AI-Health-Assistant)
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4️⃣ Select "Streamlit" as the SDK
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5️⃣ Click "Create Space" ✅
|
| 424 |
-
|
| 425 |
-
📌 Step 2: Clone the Repository Locally
|
| 426 |
-
After creating the Space, clone it to your local machine or Google Colab:
|
| 427 |
-
|
| 428 |
-
```bash
|
| 429 |
-
git clone https://huggingface.co/spaces/YOUR_USERNAME/AI-Health-Assistant
|
| 430 |
-
cd AI-Health-Assistant
|
| 431 |
-
```
|
| 432 |
-
Replace YOUR_USERNAME with your Hugging Face username!
|
| 433 |
-
|
| 434 |
-
📌 Step 3: Add app.py (Your Streamlit Chatbot)
|
| 435 |
-
Inside the cloned folder, create app.py and paste the following:
|
| 436 |
-
|
| 437 |
-
📌 Step 4: Create requirements.txt
|
| 438 |
-
Create a new file requirements.txt inside the same folder and add:
|
| 439 |
-
```bash
|
| 440 |
-
streamlit
|
| 441 |
-
requests
|
| 442 |
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```
|
| 443 |
-
|
| 444 |
-
📌 Step 5: Push Your Code to Hugging Face
|
| 445 |
-
Run these commands to push the code:
|
| 446 |
-
|
| 447 |
-
```bash
|
| 448 |
-
git add .
|
| 449 |
-
git commit -m "Initial commit"
|
| 450 |
-
git push
|
| 451 |
-
```
|
| 452 |
-
🚀 Your Space will automatically start building!
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| 453 |
-
"""
|
| 454 |
-
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| 1 |
import xgboost as xgb
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| 2 |
import pickle
|
| 3 |
import numpy as np
|
| 4 |
import pandas as pd
|
| 5 |
+
import torch
|
| 6 |
+
import streamlit as st
|
| 7 |
+
from transformers import AutoTokenizer, AutoModelForQuestionAnswering
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| 8 |
import nltk
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|
| 9 |
from nltk.tokenize import word_tokenize
|
| 10 |
+
from nltk.corpus import stopwords
|
| 11 |
+
import re
|
| 12 |
|
| 13 |
+
# 🔹 Download stopwords only when needed
|
| 14 |
nltk.download("stopwords")
|
| 15 |
nltk.download("punkt")
|
| 16 |
+
nltk.download('punkt_tab')
|
| 17 |
|
| 18 |
# Load English stopwords
|
| 19 |
stop_words = set(stopwords.words("english"))
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|
| 20 |
|
| 21 |
# ============================
|
| 22 |
# 🔹 1. Load Pretrained Medical Q&A Model
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|
| 26 |
qa_model = AutoModelForQuestionAnswering.from_pretrained(qa_model_name)
|
| 27 |
|
| 28 |
# ============================
|
| 29 |
+
# 🔹 2. Load Symptom Checker Model
|
| 30 |
# ============================
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|
| 31 |
model = xgb.XGBClassifier()
|
| 32 |
+
model.load_model("symptom_disease_model.json") # Load trained model
|
| 33 |
+
label_encoder = pickle.load(open("label_encoder.pkl", "rb")) # Load label encoder
|
| 34 |
+
X_train = pd.read_csv("X_train.csv") # Load symptoms
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|
| 35 |
symptom_list = X_train.columns.tolist()
|
| 36 |
|
| 37 |
# ============================
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|
| 53 |
medical_context = load_medical_context()
|
| 54 |
|
| 55 |
# ============================
|
| 56 |
+
# 🔹 5. Doctor Database
|
| 57 |
# ============================
|
| 58 |
doctor_database = {
|
| 59 |
"malaria": [{"name": "Dr. Rajesh Kumar", "specialty": "Infectious Diseases", "location": "Apollo Hospital", "contact": "9876543210"}],
|
| 60 |
"diabetes": [{"name": "Dr. Anil Mehta", "specialty": "Endocrinologist", "location": "AIIMS Delhi", "contact": "9876543233"}],
|
| 61 |
"heart attack": [{"name": "Dr. Vikram Singh", "specialty": "Cardiologist", "location": "Medanta Hospital", "contact": "9876543255"}],
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|
| 62 |
}
|
| 63 |
|
| 64 |
# ============================
|
| 65 |
+
# 🔹 6. Predict Disease from Symptoms
|
| 66 |
# ============================
|
| 67 |
def predict_disease(user_symptoms):
|
| 68 |
+
"""Predicts disease based on user symptoms using the trained XGBoost model."""
|
| 69 |
input_vector = np.zeros(len(symptom_list))
|
| 70 |
|
| 71 |
for symptom in user_symptoms:
|
| 72 |
if symptom in symptom_list:
|
| 73 |
+
input_vector[symptom_list.index(symptom)] = 1
|
| 74 |
|
| 75 |
input_vector = input_vector.reshape(1, -1) # Reshape for model input
|
| 76 |
+
predicted_class = model.predict(input_vector)[0] # Predict disease
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|
| 77 |
predicted_disease = label_encoder.inverse_transform([predicted_class])[0]
|
| 78 |
|
| 79 |
return predicted_disease
|
|
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|
| 119 |
# ============================
|
| 120 |
# 🔹 10. Handle User Queries
|
| 121 |
# ============================
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|
| 122 |
def handle_user_query(user_query):
|
| 123 |
"""Handles user queries related to symptoms, diseases, and doctor appointments."""
|
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|
| 124 |
user_query = user_query.lower().strip()
|
| 125 |
|
| 126 |
+
# Check if query is about symptoms
|
| 127 |
+
if "symptoms" in user_query or "signs" in user_query:
|
| 128 |
+
disease = user_query.replace("symptoms", "").replace("signs", "").strip()
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|
| 129 |
return get_medical_answer(f"What are the symptoms of {disease}?")
|
| 130 |
|
| 131 |
+
# Check if query is about treatment
|
| 132 |
+
elif "treatment" in user_query or "treat" in user_query:
|
| 133 |
+
disease = user_query.replace("treatment", "").replace("treat", "").strip()
|
| 134 |
+
return get_medical_answer(f"What is the treatment for {disease}?")
|
|
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|
| 135 |
|
| 136 |
+
# Check for doctor recommendation
|
| 137 |
+
elif "who should i see" in user_query:
|
| 138 |
+
disease = user_query.replace("who should i see for", "").strip()
|
| 139 |
+
return book_appointment(disease)
|
| 140 |
|
| 141 |
+
# Check for appointment booking
|
| 142 |
+
elif "book appointment" in user_query:
|
| 143 |
+
disease = user_query.replace("book appointment for", "").strip()
|
| 144 |
+
return book_appointment(disease)
|
|
|
|
| 145 |
|
| 146 |
+
# Default case: general medical question
|
| 147 |
else:
|
| 148 |
+
return get_medical_answer(user_query)
|
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