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Update app.py
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app.py
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import gradio as gr
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import torch
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import torch.nn as nn
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import pandas as pd
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from PIL import Image
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from transformers import BlipProcessor, BlipForConditionalGeneration, AutoTokenizer, AutoModel
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# --- Load BLIP model ---
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blip_model = BlipForConditionalGeneration.from_pretrained(blip_path).to("cpu")
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# --- Load BioClinicalBERT
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tokenizer = AutoTokenizer.from_pretrained("emilyalsentzer/Bio_ClinicalBERT")
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bert_model = AutoModel.from_pretrained("emilyalsentzer/Bio_ClinicalBERT")
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class BiLSTMClassifier(nn.Module):
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def __init__(self, bert_model, hidden_dim=256, num_classes=7, dropout=0.5):
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super().__init__()
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pooled = self.dropout(pooled)
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return self.fc(pooled)
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# --- Load
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classifier = BiLSTMClassifier(bert_model).to("cpu")
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classifier.eval()
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# --- Classes ---
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attention_mask = text_inputs["attention_mask"].to("cpu")
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with torch.no_grad():
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outputs
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import gradio as gr
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import torch
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import torch.nn as nn
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from PIL import Image
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from transformers import BlipProcessor, BlipForConditionalGeneration, AutoTokenizer, AutoModel
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# --- Load BLIP model from Hugging Face Hub ---
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processor = BlipProcessor.from_pretrained("Mewish/blip_medical")
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blip_model = BlipForConditionalGeneration.from_pretrained("Mewish/blip_medical").to("cpu")
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# --- Load BioClinicalBERT backbone ---
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tokenizer = AutoTokenizer.from_pretrained("emilyalsentzer/Bio_ClinicalBERT")
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bert_model = AutoModel.from_pretrained("emilyalsentzer/Bio_ClinicalBERT")
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# --- Define BiLSTM classifier ---
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class BiLSTMClassifier(nn.Module):
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def __init__(self, bert_model, hidden_dim=256, num_classes=7, dropout=0.5):
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super().__init__()
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pooled = self.dropout(pooled)
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return self.fc(pooled)
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# --- Load classifier weights from Hugging Face Hub ---
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classifier = BiLSTMClassifier(bert_model).to("cpu")
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state_dict_url = "https://huggingface.co/Mewish/skin_cancer_classifier/resolve/main/classifier.pt"
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classifier.load_state_dict(torch.hub.load_state_dict_from_url(state_dict_url, map_location="cpu"))
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classifier.eval()
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# --- Classes ---
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attention_mask = text_inputs["attention_mask"].to("cpu")
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with torch.no_grad():
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outputs = classifier(input_ids, attention_mask)
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probs = torch.softmax(outputs, dim=1).cpu().numpy()[0]
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pred_class = classes[probs.argmax()]
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confidence = probs.max()
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return caption, pred_class, float(confidence)
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# --- Gradio Interface ---
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iface = gr.Interface(
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fn=predict,
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inputs=gr.Image(type="pil"),
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outputs=[
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gr.Textbox(label="Generated Caption"),
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gr.Textbox(label="Predicted Class"),
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gr.Number(label="Confidence Score")
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],
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title="Skin Cancer AI Agent",
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description="Upload a lesion image to generate a caption and predict the cancer type."
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)
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if __name__ == "__main__":
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iface.launch
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