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Update app.py
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app.py
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@app.get("/")
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return {
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"message": "NeuroHealth Alzheimer MRI Space",
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"supported_endpoints": ["/health", "/models", "/predict/image"],
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}
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@app.
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async def
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statuses = model_manager.get_model_status()
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return {
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"status": "ok",
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"model_status": {k: v for k, v in statuses.items() if k in AD_KEYS},
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"available_models": [m["key"] for m in model_manager.get_available_models("alzheimers")],
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}
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@app.get("/models")
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async def get_models():
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models = model_manager.get_available_models("alzheimers")
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models.append({
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"key": "ad_homogeneous",
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"name": "Alzheimer's MRI Homogeneous Ensemble (DenseNet 121+169+201)",
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"condition": "alzheimers",
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"imaging_type": "mri",
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"type": "ensemble",
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})
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return {"models": models}
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@app.post("/predict/image")
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async def predict_image(
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model_key: str = Query(..., description="Model key such as ad_dn121 or ad_homogeneous"),
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file: UploadFile = File(...),
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):
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if model_key not in AD_KEYS:
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raise HTTPException(status_code=400, detail=f"Unknown Alzheimer MRI model key: {model_key}")
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config = MODEL_CONFIGS.get(model_key, {})
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result = model_manager.predict_ensemble(model_key, image_bytes, filename)
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else:
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result = model_manager.predict_image(model_key, image_bytes, filename)
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raise HTTPException(status_code=400, detail=result["error"])
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return
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import torch
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import torchvision.models as models
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import torch.nn as nn
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from fastapi import FastAPI, UploadFile, File, HTTPException
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from PIL import Image
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import io
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import torchvision.transforms as transforms
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app = FastAPI(title="Alzheimer MRI API")
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DEVICE = torch.device("cuda" if torch.cuda.is_available() else "cpu")
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# -----------------------------
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# MODEL LOADER
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# -----------------------------
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def load_model(path, num_classes=3):
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model = models.densenet121(weights=None)
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model.classifier = nn.Linear(model.classifier.in_features, num_classes)
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model.load_state_dict(torch.load(path, map_location=DEVICE))
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model.to(DEVICE)
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model.eval()
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return model
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# -----------------------------
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# LOAD ALL MODELS
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# -----------------------------
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MODELS = {
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"ad_dn121": load_model("alzheimers_densenet121.pth"),
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"ad_dn169": load_model("alzheimers_densenet169.pth"),
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"ad_dn201": load_model("alzheimers_densenet201.pth"),
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}
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# -----------------------------
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# IMAGE TRANSFORM
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# -----------------------------
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transform = transforms.Compose([
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transforms.Resize((224, 224)),
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transforms.ToTensor(),
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])
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# -----------------------------
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# PREDICTION FUNCTION
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# -----------------------------
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def predict(model, image_bytes):
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image = Image.open(io.BytesIO(image_bytes)).convert("RGB")
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image = transform(image).unsqueeze(0).to(DEVICE)
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with torch.no_grad():
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outputs = model(image)
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probs = torch.softmax(outputs, dim=1)
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return probs[0].tolist()
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# -----------------------------
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# ROUTES
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# -----------------------------
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@app.get("/")
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def home():
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return {"message": "Alzheimer MRI API is running"}
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@app.post("/predict")
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async def predict_image(model_key: str, file: UploadFile = File(...)):
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if model_key not in MODELS:
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raise HTTPException(status_code=400, detail="Invalid model key")
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image_bytes = await file.read()
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result = predict(MODELS[model_key], image_bytes)
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return {
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"model": model_key,
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"prediction": result
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}
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