Upload 2 files
Browse files- cos_stream_schema_examples.py +101 -0
- stream_files_to_cos.py +300 -0
cos_stream_schema_examples.py
ADDED
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# Define input data schema as a proper Python list (not a string)
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input_schema = [
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{
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'id': '1',
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'type': 'struct',
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'fields': [
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{
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'name': 'cos_config',
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'type': 'object',
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'nullable': False,
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'metadata': {
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'description': 'Cloud Object Storage configuration'
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}
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},
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{
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'name': 'source_urls',
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'type': 'array',
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'nullable': False,
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'metadata': {
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'description': 'URLs of files to download and upload to COS'
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}
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},
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{
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'name': 'prefix',
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'type': 'string',
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'nullable': True,
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'metadata': {
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'description': 'Optional prefix to add to the file names in COS'
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}
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},
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{
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'name': 'http_method',
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'type': 'string',
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'nullable': True,
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'metadata': {
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'description': 'HTTP method to use for downloading files'
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}
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}
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]
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}
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]
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# Define output data schema as a proper Python list (not a string)
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output_schema = [
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{
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'id': '1',
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'type': 'struct',
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'fields': [
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{
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'name': 'status',
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'type': 'string',
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'nullable': False,
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'metadata': {
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'description': 'Status of the operation (success or error)'
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}
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},
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{
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'name': 'data',
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'type': 'object',
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'nullable': True,
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'metadata': {
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'description': 'Response data containing upload details'
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}
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},
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{
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'name': 'message',
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'type': 'string',
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'nullable': True,
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'metadata': {
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'description': 'Error message if status is error'
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}
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}
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]
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}
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]
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# Define sample scoring input
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sample_input = {
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'input_data': [
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{
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'fields': ['cos_config', 'source_urls', 'prefix', 'http_method'],
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'values': [
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[
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{
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'bucket_name': 'my-bucket',
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'api_key': '<your-cos-api-key>',
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'instance_id': '<your-cos-instance-id>',
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'auth_endpoint': 'https://iam.cloud.ibm.com/identity/token',
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'endpoint_url': 'https://s3.eu-de.cloud-object-storage.appdomain.cloud'
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},
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[
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'https://example.com/sample-file.pdf',
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'https://example.com/another-file.csv'
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],
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'uploads/files',
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'GET'
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]
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]
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}
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]
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}
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stream_files_to_cos.py
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@@ -0,0 +1,300 @@
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| 1 |
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def stream_file_to_cos():
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# # Install required dependencies
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| 3 |
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# import subprocess
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| 4 |
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# subprocess.check_output('pip install ibm-cos-sdk requests', shell=True)
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### ^^^ Not necessary in this case since both are part of the default python 'runtime-24.1-py3.11' environment on watsox.ai
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# Import dependencies
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import ibm_boto3
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import requests
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from ibm_botocore.client import Config
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import json
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import os
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import re
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from urllib.parse import unquote
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def extract_filename_from_headers(response):
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"""
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Extract the actual filename from response headers.
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Checks Content-Disposition and falls back to other methods if needed.
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"""
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# Try Content-Disposition header first
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content_disposition = response.headers.get('Content-Disposition')
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if content_disposition:
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# Look for filename= or filename*= parameters
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matches = re.findall(r'filename\*?=(?:([^\']*\'\')?([^;\n]*))', content_disposition)
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| 26 |
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if matches:
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# Take the last match and handle encoded filenames
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encoding, filename = matches[-1]
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if encoding:
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filename = unquote(filename)
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return filename.strip('"\'')
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# Try Content-Type for file extension
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content_type = response.headers.get('Content-Type', '').split(';')[0]
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extension_map = {
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# Documents
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'application/pdf': '.pdf',
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'application/vnd.openxmlformats-officedocument.wordprocessingml.document': '.docx',
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'application/vnd.openxmlformats-officedocument.spreadsheetml.sheet': '.xlsx',
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'application/vnd.openxmlformats-officedocument.presentationml.presentation': '.pptx',
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'text/csv': '.csv',
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'application/xml': '.xml',
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'text/xml': '.xml',
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'application/yaml': '.yaml',
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'text/yaml': '.yaml',
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'application/toml': '.toml',
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'text/plain': '.txt',
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# Archives
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'application/x-rar-compressed': '.rar',
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'application/x-7z-compressed': '.7z',
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'application/zip': '.zip',
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| 53 |
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'application/x-tar': '.tar',
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'application/gzip': '.gz',
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'application/x-gzip': '.gz',
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# Executables
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'application/x-msdownload': '.exe',
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'application/x-apple-diskimage': '.dmg',
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# Data formats
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| 62 |
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'application/json': '.json',
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'application/x-jsonlines': '.jsonl',
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'application/parquet': '.parquet',
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# Images
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| 67 |
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'image/jpeg': '.jpg',
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| 68 |
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'image/png': '.png',
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'image/tiff': '.tiff',
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'image/gif': '.gif',
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| 71 |
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| 72 |
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# Code and notebooks
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| 73 |
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'application/x-ipynb+json': '.ipynb',
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'text/x-python': '.py',
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| 75 |
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'application/x-python-code': '.py'
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| 76 |
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}
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| 77 |
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| 78 |
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# If we have a valid content type with extension mapping
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| 79 |
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if content_type in extension_map:
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| 80 |
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# Try to find a filename in the URL path
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| 81 |
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url_path = response.url.split('/')[-1]
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| 82 |
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# Remove query parameters if any
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url_path = url_path.split('?')[0]
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# If the URL path has no extension, add the appropriate one
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| 85 |
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if '.' not in url_path:
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return f"{url_path}{extension_map[content_type]}"
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+
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# Fallback to URL filename
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return response.url.split('/')[-1].split('?')[0]
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def score(payload, token=None):
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"""
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| 93 |
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WatsonX.ai deployable function to stream files from HTTP to Cloud Object Storage
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| 94 |
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| 95 |
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Expected payload format:
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| 96 |
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{
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| 97 |
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"input_data": [{
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| 98 |
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"fields": ["cos_config", "source_urls", "prefix", "http_method"],
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| 99 |
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"values": [[{
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| 100 |
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"bucket_name": "my-bucket",
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| 101 |
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"api_key": "my-api-key",
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| 102 |
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"instance_id": "my-instance-id",
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| 103 |
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"auth_endpoint": "https://iam.cloud.ibm.com/identity/token",
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| 104 |
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"endpoint_url": "https://s3.us-south.cloud-object-storage.appdomain.cloud"
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| 105 |
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},
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| 106 |
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["https://example.com/file1.pdf", "https://example.com/file2.csv"],
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| 107 |
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"my/prefix",
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| 108 |
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"GET"]]
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| 109 |
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}]
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| 110 |
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}
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| 111 |
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"""
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| 112 |
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try:
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| 113 |
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# Extract input parameters from payload
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| 114 |
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input_data = payload.get("input_data")[0]
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| 115 |
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fields = input_data.get("fields")
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| 116 |
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values = input_data.get("values")[0]
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| 117 |
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| 118 |
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# Map fields to values
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| 119 |
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params = dict(zip(fields, values))
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| 120 |
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| 121 |
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# Extract COS configuration
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| 122 |
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cos_config = params.get('cos_config', {})
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| 123 |
+
|
| 124 |
+
# Verify all required config values are present
|
| 125 |
+
missing_configs = [k for k, v in cos_config.items() if not v]
|
| 126 |
+
if missing_configs:
|
| 127 |
+
return {
|
| 128 |
+
'predictions': [{
|
| 129 |
+
'fields': ['status', 'message'],
|
| 130 |
+
'values': [['error', f"Missing required configuration: {', '.join(missing_configs)}"]]
|
| 131 |
+
}]
|
| 132 |
+
}
|
| 133 |
+
|
| 134 |
+
# Get function parameters
|
| 135 |
+
source_urls = params.get('source_urls', [])
|
| 136 |
+
if not source_urls:
|
| 137 |
+
return {
|
| 138 |
+
'predictions': [{
|
| 139 |
+
'fields': ['status', 'message'],
|
| 140 |
+
'values': [['error', "Missing required parameter: source_urls"]]
|
| 141 |
+
}]
|
| 142 |
+
}
|
| 143 |
+
|
| 144 |
+
# Convert single URL to list if necessary
|
| 145 |
+
if isinstance(source_urls, str):
|
| 146 |
+
source_urls = [source_urls]
|
| 147 |
+
|
| 148 |
+
prefix = params.get('prefix', '')
|
| 149 |
+
http_method = params.get('http_method', 'GET')
|
| 150 |
+
|
| 151 |
+
# Initialize COS client
|
| 152 |
+
cos_client = ibm_boto3.client(
|
| 153 |
+
"s3",
|
| 154 |
+
ibm_api_key_id=cos_config['api_key'],
|
| 155 |
+
ibm_service_instance_id=cos_config['instance_id'],
|
| 156 |
+
ibm_auth_endpoint=cos_config['auth_endpoint'],
|
| 157 |
+
config=Config(signature_version="oauth"),
|
| 158 |
+
endpoint_url=cos_config['endpoint_url']
|
| 159 |
+
)
|
| 160 |
+
|
| 161 |
+
# Normalize prefix
|
| 162 |
+
if prefix:
|
| 163 |
+
prefix = prefix.strip('/')
|
| 164 |
+
if prefix:
|
| 165 |
+
prefix = f"{prefix}/"
|
| 166 |
+
|
| 167 |
+
# Track results for each URL
|
| 168 |
+
results = []
|
| 169 |
+
errors = []
|
| 170 |
+
|
| 171 |
+
for source_url in source_urls:
|
| 172 |
+
try:
|
| 173 |
+
# Setup download stream
|
| 174 |
+
session = requests.Session()
|
| 175 |
+
response = session.request(http_method, source_url, stream=True)
|
| 176 |
+
response.raise_for_status()
|
| 177 |
+
|
| 178 |
+
# Extract actual filename from response
|
| 179 |
+
filename = extract_filename_from_headers(response)
|
| 180 |
+
|
| 181 |
+
# Combine prefix with filename for the full COS key
|
| 182 |
+
target_key = f"{prefix}{filename}" if prefix else filename
|
| 183 |
+
|
| 184 |
+
# Upload file to COS
|
| 185 |
+
conf = ibm_boto3.s3.transfer.TransferConfig(
|
| 186 |
+
multipart_threshold=1024**2, # 1MB
|
| 187 |
+
max_concurrency=100
|
| 188 |
+
)
|
| 189 |
+
|
| 190 |
+
cos_client.upload_fileobj(
|
| 191 |
+
response.raw,
|
| 192 |
+
cos_config['bucket_name'],
|
| 193 |
+
target_key,
|
| 194 |
+
Config=conf
|
| 195 |
+
)
|
| 196 |
+
|
| 197 |
+
results.append({
|
| 198 |
+
"source_url": source_url,
|
| 199 |
+
"bucket": cos_config['bucket_name'],
|
| 200 |
+
"key": target_key,
|
| 201 |
+
"filename": filename,
|
| 202 |
+
"status": "success"
|
| 203 |
+
})
|
| 204 |
+
|
| 205 |
+
except Exception as e:
|
| 206 |
+
errors.append({
|
| 207 |
+
"source_url": source_url,
|
| 208 |
+
"error": str(e)
|
| 209 |
+
})
|
| 210 |
+
|
| 211 |
+
# Prepare response in watsonx.ai format
|
| 212 |
+
response_data = {
|
| 213 |
+
"successful_uploads": results,
|
| 214 |
+
"failed_uploads": errors,
|
| 215 |
+
"total_processed": len(source_urls),
|
| 216 |
+
"successful_count": len(results),
|
| 217 |
+
"failed_count": len(errors)
|
| 218 |
+
}
|
| 219 |
+
|
| 220 |
+
return {
|
| 221 |
+
'predictions': [{
|
| 222 |
+
'fields': ['status', 'data'],
|
| 223 |
+
'values': [['success' if results else 'error', response_data]]
|
| 224 |
+
}]
|
| 225 |
+
}
|
| 226 |
+
|
| 227 |
+
except Exception as e:
|
| 228 |
+
return {
|
| 229 |
+
'predictions': [{
|
| 230 |
+
'fields': ['status', 'message'],
|
| 231 |
+
'values': [['error', f"Error processing request: {str(e)}"]]
|
| 232 |
+
}]
|
| 233 |
+
}
|
| 234 |
+
|
| 235 |
+
return score
|
| 236 |
+
|
| 237 |
+
# For testing in notebook
|
| 238 |
+
score = stream_file_to_cos()
|
| 239 |
+
|
| 240 |
+
|
| 241 |
+
# ------------------------------------------------------------------------------------------------------------
|
| 242 |
+
### Example Usage:
|
| 243 |
+
# try:
|
| 244 |
+
# import requests
|
| 245 |
+
# import json
|
| 246 |
+
|
| 247 |
+
# wx_api_key = ""
|
| 248 |
+
# wx_region = "us-south" ### watsonx.ai region
|
| 249 |
+
# serving_name = "" ### Serving name or id of your deployment
|
| 250 |
+
|
| 251 |
+
|
| 252 |
+
# ## Retrieve a bearer token
|
| 253 |
+
# token_response = requests.post('https://iam.cloud.ibm.com/identity/token',
|
| 254 |
+
# data={
|
| 255 |
+
# "apikey": wx_api_key,
|
| 256 |
+
# "grant_type": 'urn:ibm:params:oauth:grant-type:apikey'
|
| 257 |
+
# }
|
| 258 |
+
# )
|
| 259 |
+
# bearer_tk = token_response.json()["access_token"]
|
| 260 |
+
|
| 261 |
+
|
| 262 |
+
# # Example run of function
|
| 263 |
+
# scoring_inputs = {
|
| 264 |
+
# "input_data": [
|
| 265 |
+
# {
|
| 266 |
+
# "fields": [
|
| 267 |
+
# "cos_config",
|
| 268 |
+
# "source_urls",
|
| 269 |
+
# "prefix",
|
| 270 |
+
# "http_method"],
|
| 271 |
+
# "values": [
|
| 272 |
+
# [
|
| 273 |
+
# {
|
| 274 |
+
# "api_key": "<insert_api_key>",
|
| 275 |
+
# "auth_endpoint": "https://iam.cloud.ibm.com/identity/token",
|
| 276 |
+
# "bucket_name": "<target_bucket_name>",
|
| 277 |
+
# "endpoint_url": "https://s3.eu-de.cloud-object-storage.appdomain.cloud", ### preset for Frankfurt Regional Here
|
| 278 |
+
# "instance_id": "<resource_instance_id starts with crn:...>"
|
| 279 |
+
# },
|
| 280 |
+
# [
|
| 281 |
+
# "https://data.mendeley.com/public-files/datasets/27c8pwsd6v/files/8145e2c0-83f8-4367-87d7-6778a7bc2e5f/file_downloaded", ### Example Data Links
|
| 282 |
+
# "https://data.mendeley.com/public-files/datasets/27c8pwsd6v/files/136853fb-52b3-457f-94cf-c79821ed5145/file_downloaded",
|
| 283 |
+
# "https://data.mendeley.com/public-files/datasets/27c8pwsd6v/files/8be42620-b4c2-4535-b9ce-e9b62190202f/file_downloaded",
|
| 284 |
+
# "https://data.mendeley.com/public-files/datasets/27c8pwsd6v/files/f88087d7-4d29-444a-b9ec-e203c41ec52b/file_downloaded"
|
| 285 |
+
# ],
|
| 286 |
+
# "cos_stream_test_run_batch", ### "Folder path to save to"
|
| 287 |
+
# "GET"
|
| 288 |
+
# ]
|
| 289 |
+
# ]
|
| 290 |
+
# }
|
| 291 |
+
# ]
|
| 292 |
+
# }
|
| 293 |
+
|
| 294 |
+
# function_run = requests.post(
|
| 295 |
+
# url = f'https://{wx_region}.ml.cloud.ibm.com/ml/v4/deployments/{serving_name}/predictions?version=2021-05-01',
|
| 296 |
+
# json = scoring_inputs,
|
| 297 |
+
# headers = {'Authorization': 'Bearer ' + bearer_tk}
|
| 298 |
+
# )
|
| 299 |
+
# finally:
|
| 300 |
+
# print(function_run.json())
|