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Update app.py
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app.py
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@@ -14,16 +14,20 @@ import faiss
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import numpy as np
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from transformers import pipeline
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# CONFIG
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INDEX_PATH = "faiss_index.index"
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METADATA_PATH = "metadata.json"
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# Load embedding model
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embed_model = SentenceTransformer(EMBEDDING_MODEL_NAME)
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# ---
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def extract_text_from_pdf(file_path):
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reader = PdfReader(file_path)
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return "\n\n".join(page.extract_text() or "" for page in reader.pages)
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@@ -47,65 +51,103 @@ def extract_text_from_url(url):
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s.decompose()
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return soup.get_text(separator="\n")
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# ---
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splitter = RecursiveCharacterTextSplitter(chunk_size=3000, chunk_overlap=100)
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# ---
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def ingest_sources(files, urls):
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docs, metadata = [], []
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# Skip if already indexed
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if os.path.exists(INDEX_PATH) and os.path.exists(METADATA_PATH):
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return "
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for f in files:
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tmp = tempfile.NamedTemporaryFile(delete=False)
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os.unlink(tmp.name)
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for i, c in enumerate(splitter.split_text(text)):
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docs.append(c)
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metadata.append({"source": name, "chunk": i, "type": "file"})
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for u in urls:
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try:
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text = extract_text_from_url(u)
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for i, c in enumerate(splitter.split_text(text)):
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docs.append(c)
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metadata.append({"source": u, "chunk": i, "type": "url"})
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except Exception as e:
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print(f"URL error for {u}: {e}")
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if not docs:
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return "No
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def retrieve_topk(query, k=5):
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if not os.path.exists(INDEX_PATH):
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return []
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@@ -119,8 +161,10 @@ def retrieve_topk(query, k=5):
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results.append(metadata[idx])
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return results
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# ---
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def ask_prompt(prompt, top_k=5):
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hits = retrieve_topk(prompt, k=top_k)
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@@ -138,9 +182,11 @@ def ask_prompt(prompt, top_k=5):
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out = gen_pipeline(full_prompt, max_length=400, do_sample=False)[0]["generated_text"]
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return out + "\n\nSources:\n" + "\n".join(sources)
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# ---
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with gr.Blocks() as demo:
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gr.Markdown("# 🧠 Research Assistant (light version)\nUpload PDFs,
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with gr.Row():
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with gr.Column():
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import numpy as np
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from transformers import pipeline
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# -----------------------------
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# CONFIG
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# -----------------------------
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HF_GENERATION_MODEL = os.environ.get("HF_GENERATION_MODEL", "google/flan-t5-large") # You can switch later to DeepSeek
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EMBEDDING_MODEL_NAME = "sentence-transformers/paraphrase-MiniLM-L3-v2" # Faster, smaller
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INDEX_PATH = "faiss_index.index"
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METADATA_PATH = "metadata.json"
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# Load embedding model
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embed_model = SentenceTransformer(EMBEDDING_MODEL_NAME)
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# -----------------------------
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# FILE HELPERS
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# -----------------------------
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def extract_text_from_pdf(file_path):
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reader = PdfReader(file_path)
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return "\n\n".join(page.extract_text() or "" for page in reader.pages)
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s.decompose()
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return soup.get_text(separator="\n")
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# -----------------------------
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# CHUNKER (larger = faster)
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# -----------------------------
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splitter = RecursiveCharacterTextSplitter(chunk_size=3000, chunk_overlap=100)
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# -----------------------------
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# INGESTION
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# -----------------------------
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def ingest_sources(files, urls):
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docs, metadata = [], []
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if os.path.exists(INDEX_PATH) and os.path.exists(METADATA_PATH):
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return "Index already exists. Delete the files to re-ingest."
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for f in files:
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tmp = tempfile.NamedTemporaryFile(delete=False)
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try:
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if hasattr(f, "read"):
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data = f.read()
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if isinstance(data, str):
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data = data.encode("utf-8")
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tmp.write(data)
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name = getattr(f, "name", "uploaded_file")
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elif isinstance(f, dict) and "data" in f:
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data = f["data"]
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if isinstance(data, str):
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data = data.encode("utf-8")
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tmp.write(data)
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name = f.get("name", "uploaded_file")
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elif isinstance(f, str):
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tmp.write(f.encode("utf-8"))
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name = "uploaded_text.txt"
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else:
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tmp.close()
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os.unlink(tmp.name)
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return f"Unknown upload type: {type(f)}"
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finally:
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tmp.flush()
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tmp.close()
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try:
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low = name.lower()
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if low.endswith(".pdf"):
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text = extract_text_from_pdf(tmp.name)
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elif low.endswith(".docx"):
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text = extract_text_from_docx(tmp.name)
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elif low.endswith((".xls", ".xlsx")):
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text = extract_text_from_excel(tmp.name)
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else:
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with open(tmp.name, "r", encoding="utf-8", errors="ignore") as fh:
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text = fh.read()
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except Exception as e:
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print(f"Extraction error for {name}: {e}")
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os.unlink(tmp.name)
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continue
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os.unlink(tmp.name)
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for i, c in enumerate(splitter.split_text(text)):
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docs.append(c)
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metadata.append({"source": name, "chunk": i, "type": "file"})
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for u in urls or []:
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u = (u or "").strip()
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if not u:
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continue
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try:
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text = extract_text_from_url(u)
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for i, c in enumerate(splitter.split_text(text)):
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docs.append(c)
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metadata.append({"source": u, "chunk": i, "type": "url"})
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except Exception as e:
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print(f"URL fetch error for {u}: {e}")
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if not docs:
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return "No content ingested (empty or failed files)."
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try:
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embeddings = embed_model.encode(docs, show_progress_bar=True, convert_to_numpy=True)
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except Exception as e:
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return f"Embedding error: {e}"
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try:
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dim = embeddings.shape[1]
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index = faiss.IndexFlatL2(dim)
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index.add(embeddings)
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faiss.write_index(index, INDEX_PATH)
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with open(METADATA_PATH, "w", encoding="utf-8") as fh:
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json.dump(metadata, fh)
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except Exception as e:
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return f"Indexing error: {e}"
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return f"Ingested {len(docs)} chunks from {len(files)} files and {len(urls)} URLs."
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# -----------------------------
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# RETRIEVAL
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# -----------------------------
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def retrieve_topk(query, k=5):
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if not os.path.exists(INDEX_PATH):
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return []
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results.append(metadata[idx])
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return results
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# -----------------------------
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# GENERATION PIPELINE
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# -----------------------------
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gen_pipeline = pipeline("text2text-generation", model=HF_GENERATION_MODEL, device=-1)
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def ask_prompt(prompt, top_k=5):
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hits = retrieve_topk(prompt, k=top_k)
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out = gen_pipeline(full_prompt, max_length=400, do_sample=False)[0]["generated_text"]
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return out + "\n\nSources:\n" + "\n".join(sources)
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# -----------------------------
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# GRADIO UI
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# -----------------------------
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with gr.Blocks() as demo:
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gr.Markdown("# 🧠 Research Assistant (light version)\nUpload PDFs, Word, Excel, or URLs. Click **Ingest**, then ask your question.")
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with gr.Row():
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with gr.Column():
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