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3f09b3e
1
Parent(s):
499b5c3
process_documents_with_chunking improvement
Browse files- app.py +15 -5
- document_processor.py +0 -263
- documents_prep.py +68 -30
app.py
CHANGED
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@@ -96,6 +96,7 @@ def initialize_system(repo_id, hf_token, download_dir, chunks_filename=None,
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json_files_dir=None, table_data_dir=None, image_data_dir=None,
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use_json_instead_csv=False):
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try:
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log_message("Инициализация системы")
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os.makedirs(download_dir, exist_ok=True)
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from config import CHUNK_SIZE, CHUNK_OVERLAP
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@@ -112,10 +113,9 @@ def initialize_system(repo_id, hf_token, download_dir, chunks_filename=None,
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chunk_overlap=CHUNK_OVERLAP,
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separator=" "
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)
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-
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log_message(f"Configured chunk size: {CHUNK_SIZE}")
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log_message(f"Configured chunk overlap: {CHUNK_OVERLAP}")
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-
log_message(f"Settings text splitter chunk size: {Settings.text_splitter.chunk_size if hasattr(Settings, 'text_splitter') else 'Not set'}")
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all_documents = []
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chunks_df = None
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@@ -135,14 +135,24 @@ def initialize_system(repo_id, hf_token, download_dir, chunks_filename=None,
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if table_data_dir:
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log_message("Добавляю табличные данные")
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table_documents = load_table_data(repo_id, hf_token, table_data_dir)
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-
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if image_data_dir:
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log_message("Добавляю данные изображений")
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image_documents = load_image_data(repo_id, hf_token, image_data_dir)
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-
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log_message(f"Всего
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vector_index = create_vector_index(all_documents)
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query_engine = create_query_engine(vector_index)
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json_files_dir=None, table_data_dir=None, image_data_dir=None,
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use_json_instead_csv=False):
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try:
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+
from documents_prep import process_documents_with_chunking
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log_message("Инициализация системы")
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os.makedirs(download_dir, exist_ok=True)
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from config import CHUNK_SIZE, CHUNK_OVERLAP
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chunk_overlap=CHUNK_OVERLAP,
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separator=" "
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)
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+
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log_message(f"Configured chunk size: {CHUNK_SIZE}")
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log_message(f"Configured chunk overlap: {CHUNK_OVERLAP}")
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all_documents = []
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chunks_df = None
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if table_data_dir:
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log_message("Добавляю табличные данные")
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table_documents = load_table_data(repo_id, hf_token, table_data_dir)
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+
log_message(f"Загружено {len(table_documents)} табличных документов")
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+
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# Process table documents through chunking
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chunked_table_docs, table_chunk_info = process_documents_with_chunking(table_documents)
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all_documents.extend(chunked_table_docs)
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chunk_info.extend(table_chunk_info)
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if image_data_dir:
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log_message("Добавляю данные изображений")
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image_documents = load_image_data(repo_id, hf_token, image_data_dir)
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log_message(f"Загружено {len(image_documents)} документов изображений")
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+
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# Process image documents through chunking
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chunked_image_docs, image_chunk_info = process_documents_with_chunking(image_documents)
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all_documents.extend(chunked_image_docs)
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chunk_info.extend(image_chunk_info)
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log_message(f"Всего документов после всей обработки: {len(all_documents)}")
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vector_index = create_vector_index(all_documents)
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query_engine = create_query_engine(vector_index)
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document_processor.py
DELETED
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@@ -1,263 +0,0 @@
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-
import os
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import fitz
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import pandas as pd
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from pathlib import Path
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from llama_index.core import Document, VectorStoreIndex
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from llama_index.embeddings.huggingface import HuggingFaceEmbedding
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from llama_index.core.query_engine import RetrieverQueryEngine
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from llama_index.core.retrievers import VectorIndexRetriever
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from llama_index.core.response_synthesizers import get_response_synthesizer, ResponseMode
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from llama_index.core.prompts import PromptTemplate
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from config import *
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import shutil
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import faiss
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from huggingface_hub import hf_hub_download
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def log_message(message):
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print(message, flush=True)
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def extract_text_from_pdf(file_path):
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doc = fitz.open(file_path)
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text = ""
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for page in doc:
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text += page.get_text()
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doc.close()
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return text
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def extract_text_from_txt(file_path):
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with open(file_path, 'r', encoding='utf-8') as file:
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return file.read()
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-
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def chunk_text(text, chunk_size=CHUNK_SIZE, chunk_overlap=CHUNK_OVERLAP):
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log_message(f"📄 Chunking text into pieces of {chunk_size} characters...")
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chunks = []
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start = 0
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while start < len(text):
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end = start + chunk_size
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chunk = text[start:end]
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chunks.append(chunk)
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start = end - chunk_overlap
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log_message(f"✅ Created {len(chunks)} chunks")
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return chunks
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-
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def process_uploaded_file(file_path, file_name, doc_name, doc_link):
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try:
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log_message(f"🔄 Processing file: {file_name}")
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# Create upload directory if it doesn't exist
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upload_dir = "UPLOADED_DOCUMENTS"
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os.makedirs(upload_dir, exist_ok=True)
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# Copy uploaded file to permanent location
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permanent_file_path = os.path.join(upload_dir, file_name)
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if os.path.abspath(file_path) != os.path.abspath(permanent_file_path):
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shutil.copy2(file_path, permanent_file_path)
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log_message(f"📁 File saved to: {permanent_file_path}")
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file_extension = Path(file_path).suffix.lower()
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if file_extension == '.pdf':
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log_message("📖 Extracting text from PDF...")
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text = extract_text_from_pdf(file_path)
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elif file_extension == '.txt':
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log_message("📝 Reading text file...")
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text = extract_text_from_txt(file_path)
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else:
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return None, "Unsupported file type"
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word_count = len(text.split())
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log_message(f"📊 Extracted {word_count} words from document")
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chunks = chunk_text(text)
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return {
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'document': doc_name,
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'file_name': file_name,
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'doc_link': doc_link,
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'total_words': word_count,
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'extracted_text': text,
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'chunks': chunks
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}, None
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except Exception as e:
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log_message(f"❌ Error processing file: {str(e)}")
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return None, str(e)
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def get_existing_documents():
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try:
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# First check CSV file for processed documents
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chunks_csv_path = os.path.join(download_dir, chunks_filename)
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if os.path.exists(chunks_csv_path):
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chunks_df = pd.read_csv(chunks_csv_path)
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if not chunks_df.empty and 'document_name' in chunks_df.columns:
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unique_docs = chunks_df['document_name'].unique()
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return sorted([doc for doc in unique_docs if pd.notna(doc)])
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# Fallback to checking uploaded files directory
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upload_dir = "UPLOADED_DOCUMENTS"
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if os.path.exists(upload_dir):
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documents = []
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for file_name in os.listdir(upload_dir):
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if file_name.endswith(('.txt', '.pdf')):
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doc_name = os.path.splitext(file_name)[0]
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documents.append(doc_name)
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return sorted(documents)
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return []
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except Exception as e:
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log_message(f"❌ Error reading documents: {str(e)}")
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return []
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def add_to_vector_index(new_chunks, file_info, existing_chunks_df=None):
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try:
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log_message("🔧 Setting up embedding model...")
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embed_model = HuggingFaceEmbedding(model_name=EMBEDDING_MODEL)
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log_message("📝 Creating document objects...")
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new_documents = []
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new_chunk_data = []
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for i, chunk in enumerate(new_chunks):
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doc_id = f"{file_info['file_name']}_{i}"
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new_documents.append(Document(
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text=chunk,
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metadata={
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"chunk_id": doc_id,
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"document_id": file_info['file_name'],
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"document_name": file_info['document'],
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"document_link": file_info['doc_link']
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}
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))
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new_chunk_data.append({
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'chunk_id': doc_id,
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'document_id': file_info['file_name'],
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'document_name': file_info['document'],
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'document_link': file_info['doc_link'],
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'chunk_text': chunk
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})
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if existing_chunks_df is not None:
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log_message("🔄 Merging with existing chunks...")
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new_chunks_df = pd.DataFrame(new_chunk_data)
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chunks_df = pd.concat([existing_chunks_df, new_chunks_df], ignore_index=True)
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else:
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chunks_df = pd.DataFrame(new_chunk_data)
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log_message("🏗️ Building vector index...")
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all_documents = [Document(text=str(row['chunk_text']),
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metadata={
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"chunk_id": row['chunk_id'],
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"document_id": row['document_id'],
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"document_name": row['document_name'],
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"document_link": row['document_link']
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})
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for _, row in chunks_df.iterrows()]
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vector_index = VectorStoreIndex.from_documents(all_documents, embed_model=embed_model)
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log_message("🔍 Setting up retriever...")
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retriever = VectorIndexRetriever(
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index=vector_index,
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similarity_top_k=RETRIEVER_TOP_K,
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similarity_cutoff=SIMILARITY_THRESHOLD
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)
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log_message("🎯 Configuring response synthesizer...")
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custom_prompt_template = PromptTemplate(CUSTOM_PROMPT_NEW)
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response_synthesizer = get_response_synthesizer(
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response_mode=ResponseMode.TREE_SUMMARIZE,
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text_qa_template=custom_prompt_template
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)
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query_engine = RetrieverQueryEngine(
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retriever=retriever,
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response_synthesizer=response_synthesizer
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)
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log_message("💾 Saving chunks to file...")
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os.makedirs(download_dir, exist_ok=True)
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chunks_df.to_csv(os.path.join(download_dir, chunks_filename), index=False)
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log_message("✅ Successfully added document to vector index")
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return query_engine, chunks_df, None
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except Exception as e:
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log_message(f"❌ Error adding to vector index: {str(e)}")
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return None, existing_chunks_df, str(e)
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def initialize_system():
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global query_engine, chunks_df
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try:
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log_message("🔄 Initializing system...")
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os.makedirs(download_dir, exist_ok=True)
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log_message("📥 Loading files...")
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faiss_index_path = hf_hub_download(
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repo_id=REPO_ID,
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filename=faiss_index_filename,
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local_dir=download_dir,
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repo_type="dataset",
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token=HF_TOKEN
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)
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chunks_csv_path = hf_hub_download(
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repo_id=REPO_ID,
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filename=chunks_filename,
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local_dir=download_dir,
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repo_type="dataset",
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token=HF_TOKEN
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)
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log_message("📚 Loading index and data...")
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index_faiss = faiss.read_index(faiss_index_path)
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chunks_df = pd.read_csv(chunks_csv_path)
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log_message("🤖 Setting up models...")
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embed_model = HuggingFaceEmbedding(model_name=EMBEDDING_MODEL)
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text_column = None
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for col in chunks_df.columns:
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if 'text' in col.lower() or 'content' in col.lower() or 'chunk' in col.lower():
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text_column = col
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break
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if text_column is None:
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text_column = chunks_df.columns[0]
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log_message("📝 Creating documents...")
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documents = [Document(text=str(row[text_column]),
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metadata={"chunk_id": row.get('chunk_id', i),
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"document_id": row.get('document_id', 'unknown'),
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"document_name": row.get('document_name', 'unknown'),
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"document_link": row.get('document_link', '')})
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for i, (_, row) in enumerate(chunks_df.iterrows())]
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log_message("🔍 Building vector index...")
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vector_index = VectorStoreIndex.from_documents(documents, embed_model=embed_model)
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retriever = VectorIndexRetriever(
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index=vector_index,
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similarity_top_k=RETRIEVER_TOP_K,
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similarity_cutoff=SIMILARITY_THRESHOLD
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)
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custom_prompt_template = PromptTemplate(CUSTOM_PROMPT)
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response_synthesizer = get_response_synthesizer(
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response_mode=ResponseMode.TREE_SUMMARIZE,
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text_qa_template=custom_prompt_template
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)
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query_engine = RetrieverQueryEngine(
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retriever=retriever,
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response_synthesizer=response_synthesizer
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)
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log_message("✅ System successfully initialized!")
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return query_engine, chunks_df, True
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except Exception as e:
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log_message(f"❌ Initialization error: {str(e)}")
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chunks_df = pd.DataFrame(columns=['chunk_id', 'document_id', 'document_name', 'document_link', 'chunk_text'])
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return None, chunks_df, False
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|
documents_prep.py
CHANGED
|
@@ -54,38 +54,73 @@ def process_documents_with_chunking(documents):
|
|
| 54 |
|
| 55 |
if doc_type == 'table':
|
| 56 |
table_count += 1
|
| 57 |
-
|
|
|
|
| 58 |
large_tables_count += 1
|
| 59 |
-
log_message(f"Large table found: {doc.metadata.get('table_number', 'unknown')} in document {doc.metadata.get('document_id', 'unknown')}, size: {
|
| 60 |
-
|
| 61 |
-
|
| 62 |
-
|
| 63 |
-
|
| 64 |
-
|
| 65 |
-
|
| 66 |
-
|
| 67 |
-
|
| 68 |
-
|
| 69 |
-
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
| 70 |
|
| 71 |
elif doc_type == 'image':
|
| 72 |
image_count += 1
|
| 73 |
-
|
|
|
|
| 74 |
large_images_count += 1
|
| 75 |
-
log_message(f"Large image description found: {doc.metadata.get('image_number', 'unknown')} in document {doc.metadata.get('document_id', 'unknown')}, size: {
|
| 76 |
-
|
| 77 |
-
|
| 78 |
-
|
| 79 |
-
|
| 80 |
-
|
| 81 |
-
|
| 82 |
-
|
| 83 |
-
|
| 84 |
-
|
| 85 |
-
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
| 86 |
|
| 87 |
-
else:
|
| 88 |
-
|
|
|
|
| 89 |
chunked_docs = chunk_document(doc)
|
| 90 |
all_chunked_docs.extend(chunked_docs)
|
| 91 |
text_chunks_count += len(chunked_docs)
|
|
@@ -105,7 +140,7 @@ def process_documents_with_chunking(documents):
|
|
| 105 |
'document_id': doc.metadata.get('document_id', 'unknown'),
|
| 106 |
'section_id': doc.metadata.get('section_id', 'unknown'),
|
| 107 |
'chunk_id': 0,
|
| 108 |
-
'chunk_size':
|
| 109 |
'chunk_preview': doc.text[:200] + "..." if len(doc.text) > 200 else doc.text,
|
| 110 |
'type': 'text'
|
| 111 |
})
|
|
@@ -120,6 +155,7 @@ def process_documents_with_chunking(documents):
|
|
| 120 |
|
| 121 |
return all_chunked_docs, chunk_info
|
| 122 |
|
|
|
|
| 123 |
def extract_text_from_json(data, document_id, document_name):
|
| 124 |
documents = []
|
| 125 |
|
|
@@ -244,6 +280,7 @@ def load_json_documents(repo_id, hf_token, json_files_dir, download_dir):
|
|
| 244 |
|
| 245 |
documents = extract_zip_and_process_json(local_zip_path)
|
| 246 |
all_documents.extend(documents)
|
|
|
|
| 247 |
|
| 248 |
except Exception as e:
|
| 249 |
log_message(f"Ошибка обработки ZIP файла {zip_file_path}: {str(e)}")
|
|
@@ -276,17 +313,18 @@ def load_json_documents(repo_id, hf_token, json_files_dir, download_dir):
|
|
| 276 |
log_message(f"Ошибка обработки файла {file_path}: {str(e)}")
|
| 277 |
continue
|
| 278 |
|
|
|
|
|
|
|
|
|
|
| 279 |
chunked_documents, chunk_info = process_documents_with_chunking(all_documents)
|
| 280 |
|
| 281 |
-
log_message(f"
|
| 282 |
-
log_message(f"После chunking получено {len(chunked_documents)} чанков")
|
| 283 |
|
| 284 |
return chunked_documents, chunk_info
|
| 285 |
|
| 286 |
except Exception as e:
|
| 287 |
log_message(f"Ошибка загрузки JSON документов: {str(e)}")
|
| 288 |
return [], []
|
| 289 |
-
|
| 290 |
|
| 291 |
def extract_section_title(section_text):
|
| 292 |
if not section_text.strip():
|
|
|
|
| 54 |
|
| 55 |
if doc_type == 'table':
|
| 56 |
table_count += 1
|
| 57 |
+
doc_size = len(doc.text)
|
| 58 |
+
if doc_size > CHUNK_SIZE:
|
| 59 |
large_tables_count += 1
|
| 60 |
+
log_message(f"Large table found: {doc.metadata.get('table_number', 'unknown')} in document {doc.metadata.get('document_id', 'unknown')}, size: {doc_size} characters")
|
| 61 |
+
|
| 62 |
+
# Chunk large tables
|
| 63 |
+
chunked_docs = chunk_document(doc)
|
| 64 |
+
all_chunked_docs.extend(chunked_docs)
|
| 65 |
+
|
| 66 |
+
for i, chunk_doc in enumerate(chunked_docs):
|
| 67 |
+
chunk_info.append({
|
| 68 |
+
'document_id': chunk_doc.metadata.get('document_id', 'unknown'),
|
| 69 |
+
'section_id': chunk_doc.metadata.get('section_id', 'unknown'),
|
| 70 |
+
'chunk_id': i,
|
| 71 |
+
'chunk_size': len(chunk_doc.text),
|
| 72 |
+
'chunk_preview': chunk_doc.text[:200] + "..." if len(chunk_doc.text) > 200 else chunk_doc.text,
|
| 73 |
+
'type': 'table',
|
| 74 |
+
'table_number': chunk_doc.metadata.get('table_number', 'unknown')
|
| 75 |
+
})
|
| 76 |
+
else:
|
| 77 |
+
all_chunked_docs.append(doc)
|
| 78 |
+
chunk_info.append({
|
| 79 |
+
'document_id': doc.metadata.get('document_id', 'unknown'),
|
| 80 |
+
'section_id': doc.metadata.get('section_id', 'unknown'),
|
| 81 |
+
'chunk_id': 0,
|
| 82 |
+
'chunk_size': doc_size,
|
| 83 |
+
'chunk_preview': doc.text[:200] + "..." if len(doc.text) > 200 else doc.text,
|
| 84 |
+
'type': 'table',
|
| 85 |
+
'table_number': doc.metadata.get('table_number', 'unknown')
|
| 86 |
+
})
|
| 87 |
|
| 88 |
elif doc_type == 'image':
|
| 89 |
image_count += 1
|
| 90 |
+
doc_size = len(doc.text)
|
| 91 |
+
if doc_size > CHUNK_SIZE:
|
| 92 |
large_images_count += 1
|
| 93 |
+
log_message(f"Large image description found: {doc.metadata.get('image_number', 'unknown')} in document {doc.metadata.get('document_id', 'unknown')}, size: {doc_size} characters")
|
| 94 |
+
|
| 95 |
+
# Chunk large images
|
| 96 |
+
chunked_docs = chunk_document(doc)
|
| 97 |
+
all_chunked_docs.extend(chunked_docs)
|
| 98 |
+
|
| 99 |
+
for i, chunk_doc in enumerate(chunked_docs):
|
| 100 |
+
chunk_info.append({
|
| 101 |
+
'document_id': chunk_doc.metadata.get('document_id', 'unknown'),
|
| 102 |
+
'section_id': chunk_doc.metadata.get('section_id', 'unknown'),
|
| 103 |
+
'chunk_id': i,
|
| 104 |
+
'chunk_size': len(chunk_doc.text),
|
| 105 |
+
'chunk_preview': chunk_doc.text[:200] + "..." if len(chunk_doc.text) > 200 else chunk_doc.text,
|
| 106 |
+
'type': 'image',
|
| 107 |
+
'image_number': chunk_doc.metadata.get('image_number', 'unknown')
|
| 108 |
+
})
|
| 109 |
+
else:
|
| 110 |
+
all_chunked_docs.append(doc)
|
| 111 |
+
chunk_info.append({
|
| 112 |
+
'document_id': doc.metadata.get('document_id', 'unknown'),
|
| 113 |
+
'section_id': doc.metadata.get('section_id', 'unknown'),
|
| 114 |
+
'chunk_id': 0,
|
| 115 |
+
'chunk_size': doc_size,
|
| 116 |
+
'chunk_preview': doc.text[:200] + "..." if len(doc.text) > 200 else doc.text,
|
| 117 |
+
'type': 'image',
|
| 118 |
+
'image_number': doc.metadata.get('image_number', 'unknown')
|
| 119 |
+
})
|
| 120 |
|
| 121 |
+
else: # text documents
|
| 122 |
+
doc_size = len(doc.text)
|
| 123 |
+
if doc_size > CHUNK_SIZE:
|
| 124 |
chunked_docs = chunk_document(doc)
|
| 125 |
all_chunked_docs.extend(chunked_docs)
|
| 126 |
text_chunks_count += len(chunked_docs)
|
|
|
|
| 140 |
'document_id': doc.metadata.get('document_id', 'unknown'),
|
| 141 |
'section_id': doc.metadata.get('section_id', 'unknown'),
|
| 142 |
'chunk_id': 0,
|
| 143 |
+
'chunk_size': doc_size,
|
| 144 |
'chunk_preview': doc.text[:200] + "..." if len(doc.text) > 200 else doc.text,
|
| 145 |
'type': 'text'
|
| 146 |
})
|
|
|
|
| 155 |
|
| 156 |
return all_chunked_docs, chunk_info
|
| 157 |
|
| 158 |
+
|
| 159 |
def extract_text_from_json(data, document_id, document_name):
|
| 160 |
documents = []
|
| 161 |
|
|
|
|
| 280 |
|
| 281 |
documents = extract_zip_and_process_json(local_zip_path)
|
| 282 |
all_documents.extend(documents)
|
| 283 |
+
log_message(f"Извлечено {len(documents)} документов из ZIP архива {zip_file_path}")
|
| 284 |
|
| 285 |
except Exception as e:
|
| 286 |
log_message(f"Ошибка обработки ZIP файла {zip_file_path}: {str(e)}")
|
|
|
|
| 313 |
log_message(f"Ошибка обработки файла {file_path}: {str(e)}")
|
| 314 |
continue
|
| 315 |
|
| 316 |
+
log_message(f"Всего создано {len(all_documents)} исходных документов из JSON файлов")
|
| 317 |
+
|
| 318 |
+
# Process documents through chunking function
|
| 319 |
chunked_documents, chunk_info = process_documents_with_chunking(all_documents)
|
| 320 |
|
| 321 |
+
log_message(f"После chunking получено {len(chunked_documents)} чанков из JSON данных")
|
|
|
|
| 322 |
|
| 323 |
return chunked_documents, chunk_info
|
| 324 |
|
| 325 |
except Exception as e:
|
| 326 |
log_message(f"Ошибка загрузки JSON документов: {str(e)}")
|
| 327 |
return [], []
|
|
|
|
| 328 |
|
| 329 |
def extract_section_title(section_text):
|
| 330 |
if not section_text.strip():
|