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Upload 4 files
Browse files- src/README.md +19 -0
- src/ocd_patient_dataset.csv +0 -0
- src/requirements.txt +167 -0
- src/streamlit_app.py +523 -38
src/README.md
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# π Blank app template
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A simple Streamlit app template for you to modify!
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[](https://blank-app-template.streamlit.app/)
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### How to run it on your own machine
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1. Install the requirements
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```
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$ pip install -r requirements.txt
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```
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2. Run the app
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```
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$ streamlit run streamlit_app.py
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```
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src/ocd_patient_dataset.csv
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See raw diff
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src/requirements.txt
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alembic==1.16.2
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altair==5.5.0
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annotated-types==0.7.0
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anyio==4.9.0
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asttokens==3.0.0
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attrs==25.3.0
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blinker==1.9.0
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cachetools==5.5.2
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category_encoders==2.7.0
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certifi==2025.6.15
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charset-normalizer==3.4.2
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choreographer==1.0.9
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click==8.2.1
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cloudpickle==3.1.1
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comm==0.2.2
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contourpy==1.3.2
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cycler==0.12.1
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Cython==3.1.2
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dash==3.1.0
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databricks-sdk==0.57.0
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decorator==5.2.1
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deprecation==2.1.0
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docker==7.1.0
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executing==2.2.0
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fastapi==0.115.14
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fastjsonschema==2.21.1
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filelock==3.18.0
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Flask==3.1.1
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fonttools==4.58.4
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fsspec==2025.5.1
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gitdb==4.0.12
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GitPython==3.1.41
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google-auth==2.40.3
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graphene==3.4.3
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graphql-core==3.2.6
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graphql-relay==3.2.0
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greenlet==3.2.3
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gunicorn==23.0.0
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h11==0.16.0
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idna==3.10
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imbalanced-learn==0.13.0
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importlib_metadata==8.7.0
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ipython==9.3.0
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ipython_pygments_lexers==1.1.1
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ipywidgets==8.1.7
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itsdangerous==2.2.0
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jedi==0.19.2
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Jinja2==3.1.6
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joblib==1.3.2
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jsonschema==4.24.0
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jsonschema-specifications==2025.4.1
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jupyter_core==5.8.1
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jupyterlab_widgets==3.0.15
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kaleido==1.0.0
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kiwisolver==1.4.8
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lightgbm==4.6.0
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llvmlite==0.44.0
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logistro==1.1.0
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Mako==1.3.10
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MarkupSafe==3.0.2
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matplotlib==3.7.5
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matplotlib-inline==0.1.7
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mlflow==3.1.1
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mlflow-skinny==3.1.1
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mpmath==1.3.0
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narwhals==1.44.0
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nbformat==5.10.4
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nest-asyncio==1.6.0
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networkx==3.5
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numba==0.61.2
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numpy==1.26.4
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nvidia-cublas-cu12==12.6.4.1
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nvidia-cuda-cupti-cu12==12.6.80
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nvidia-cuda-nvrtc-cu12==12.6.77
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nvidia-cuda-runtime-cu12==12.6.77
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nvidia-cudnn-cu12==9.5.1.17
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nvidia-cufft-cu12==11.3.0.4
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nvidia-cufile-cu12==1.11.1.6
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nvidia-curand-cu12==10.3.7.77
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nvidia-cusolver-cu12==11.7.1.2
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nvidia-cusparse-cu12==12.5.4.2
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nvidia-cusparselt-cu12==0.6.3
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nvidia-nccl-cu12==2.26.2
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nvidia-nvjitlink-cu12==12.6.85
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nvidia-nvtx-cu12==12.6.77
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opentelemetry-api==1.34.1
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opentelemetry-sdk==1.34.1
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opentelemetry-semantic-conventions==0.55b1
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orjson==3.10.18
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packaging==25.0
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pandas==2.1.4
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parso==0.8.4
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patsy==1.0.1
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pexpect==4.9.0
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pillow==11.2.1
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platformdirs==4.3.8
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plotly==5.24.1
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plotly-express==0.4.1
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plotly-resampler==0.10.0
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pmdarima==2.0.4
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prompt_toolkit==3.0.51
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protobuf==6.31.1
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psutil==7.0.0
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ptyprocess==0.7.0
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pure_eval==0.2.3
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pyarrow==20.0.0
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pyasn1==0.6.1
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pyasn1_modules==0.4.2
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| 109 |
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pycaret==3.3.2
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pydantic==2.11.7
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| 111 |
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pydantic_core==2.33.2
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| 112 |
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pydeck==0.9.1
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| 113 |
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Pygments==2.19.2
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| 114 |
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pyod==2.0.5
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| 115 |
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pyparsing==3.2.3
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python-dateutil==2.9.0.post0
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| 117 |
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pytz==2025.2
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| 118 |
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PyYAML==6.0.2
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| 119 |
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referencing==0.36.2
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| 120 |
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requests==2.32.4
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| 121 |
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retrying==1.4.0
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| 122 |
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rpds-py==0.25.1
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| 123 |
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rsa==4.9.1
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schemdraw==0.15
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scikit-base==0.7.8
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| 126 |
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scikit-learn==1.4.2
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| 127 |
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scikit-plot==0.3.7
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| 128 |
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scipy==1.11.4
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| 129 |
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seaborn==0.13.2
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| 130 |
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shap==0.48.0
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| 131 |
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simplejson==3.20.1
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| 132 |
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six==1.17.0
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| 133 |
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sklearn-compat==0.1.3
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| 134 |
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sktime==0.26.0
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| 135 |
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slicer==0.0.8
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| 136 |
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smmap==5.0.2
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| 137 |
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sniffio==1.3.1
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| 138 |
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SQLAlchemy==2.0.41
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| 139 |
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sqlparse==0.5.3
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| 140 |
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stack-data==0.6.3
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| 141 |
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starlette==0.46.2
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| 142 |
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statsmodels==0.14.4
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| 143 |
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streamlit==1.46.1
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| 144 |
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sympy==1.14.0
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| 145 |
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tbats==1.1.3
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| 146 |
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tenacity==9.1.2
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| 147 |
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threadpoolctl==3.6.0
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| 148 |
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toml==0.10.2
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| 149 |
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torch==2.7.1
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| 150 |
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tornado==6.5.1
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| 151 |
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tqdm==4.67.1
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| 152 |
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traitlets==5.14.3
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| 153 |
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triton==3.3.1
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| 154 |
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tsdownsample==0.1.4.1
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| 155 |
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typing-inspection==0.4.1
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| 156 |
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typing_extensions==4.14.0
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| 157 |
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tzdata==2025.2
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| 158 |
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urllib3==2.5.0
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| 159 |
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uvicorn==0.34.3
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| 160 |
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watchdog==6.0.0
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| 161 |
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wcwidth==0.2.13
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| 162 |
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Werkzeug==3.1.3
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| 163 |
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widgetsnbextension==4.0.14
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| 164 |
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wurlitzer==3.1.1
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| 165 |
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xxhash==3.5.0
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| 166 |
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yellowbrick==1.5
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| 167 |
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zipp==3.23.0
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src/streamlit_app.py
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import numpy as np
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import pandas as pd
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import streamlit as st
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|
| 5 |
|
| 6 |
-
|
| 7 |
-
# Welcome to Streamlit!
|
| 8 |
-
|
| 9 |
-
Edit `/streamlit_app.py` to customize this app to your heart's desire :heart:.
|
| 10 |
-
If you have any questions, checkout our [documentation](https://docs.streamlit.io) and [community
|
| 11 |
-
forums](https://discuss.streamlit.io).
|
| 12 |
-
|
| 13 |
-
In the meantime, below is an example of what you can do with just a few lines of code:
|
| 14 |
-
"""
|
| 15 |
-
|
| 16 |
-
num_points = st.slider("Number of points in spiral", 1, 10000, 1100)
|
| 17 |
-
num_turns = st.slider("Number of turns in spiral", 1, 300, 31)
|
| 18 |
-
|
| 19 |
-
indices = np.linspace(0, 1, num_points)
|
| 20 |
-
theta = 2 * np.pi * num_turns * indices
|
| 21 |
-
radius = indices
|
| 22 |
-
|
| 23 |
-
x = radius * np.cos(theta)
|
| 24 |
-
y = radius * np.sin(theta)
|
| 25 |
-
|
| 26 |
-
df = pd.DataFrame({
|
| 27 |
-
"x": x,
|
| 28 |
-
"y": y,
|
| 29 |
-
"idx": indices,
|
| 30 |
-
"rand": np.random.randn(num_points),
|
| 31 |
-
})
|
| 32 |
-
|
| 33 |
-
st.altair_chart(alt.Chart(df, height=700, width=700)
|
| 34 |
-
.mark_point(filled=True)
|
| 35 |
-
.encode(
|
| 36 |
-
x=alt.X("x", axis=None),
|
| 37 |
-
y=alt.Y("y", axis=None),
|
| 38 |
-
color=alt.Color("idx", legend=None, scale=alt.Scale()),
|
| 39 |
-
size=alt.Size("rand", legend=None, scale=alt.Scale(range=[1, 150])),
|
| 40 |
-
))
|
|
|
|
| 1 |
+
|
|
|
|
|
|
|
| 2 |
import streamlit as st
|
| 3 |
+
import pandas as pd
|
| 4 |
+
import numpy as np
|
| 5 |
+
import matplotlib.pyplot as plt
|
| 6 |
+
import seaborn as sns
|
| 7 |
+
|
| 8 |
+
import plotly.express as px
|
| 9 |
+
import plotly.graph_objects as go
|
| 10 |
+
from datetime import datetime
|
| 11 |
+
import warnings
|
| 12 |
+
from sklearn.model_selection import train_test_split, cross_val_score, GridSearchCV
|
| 13 |
+
from sklearn.preprocessing import LabelEncoder, StandardScaler, MinMaxScaler
|
| 14 |
+
from sklearn.linear_model import LinearRegression, LogisticRegression
|
| 15 |
+
from sklearn.tree import DecisionTreeRegressor, DecisionTreeClassifier
|
| 16 |
+
from sklearn.ensemble import RandomForestRegressor, RandomForestClassifier
|
| 17 |
+
from sklearn.svm import SVC, SVR
|
| 18 |
+
from sklearn.neighbors import KNeighborsClassifier, KNeighborsRegressor
|
| 19 |
+
from sklearn.naive_bayes import GaussianNB
|
| 20 |
+
from sklearn.metrics import (
|
| 21 |
+
mean_squared_error, mean_absolute_error, r2_score,
|
| 22 |
+
accuracy_score, precision_score, recall_score, f1_score,
|
| 23 |
+
confusion_matrix, classification_report, roc_auc_score
|
| 24 |
+
)
|
| 25 |
+
warnings.filterwarnings('ignore')
|
| 26 |
+
|
| 27 |
+
# MLflow and experiment tracking
|
| 28 |
+
try:
|
| 29 |
+
import mlflow
|
| 30 |
+
import mlflow.sklearn
|
| 31 |
+
MLFLOW_AVAILABLE = True
|
| 32 |
+
except ImportError:
|
| 33 |
+
MLFLOW_AVAILABLE = False
|
| 34 |
+
st.warning("MLflow not installed. Some features may be limited.")
|
| 35 |
+
|
| 36 |
+
# PyCaret imports
|
| 37 |
+
try:
|
| 38 |
+
from pycaret.classification import setup as cls_setup, compare_models as cls_compare, create_model as cls_create
|
| 39 |
+
from pycaret.classification import tune_model as cls_tune, finalize_model as cls_finalize, predict_model as cls_predict
|
| 40 |
+
from pycaret.classification import pull as cls_pull, plot_model as cls_plot, evaluate_model as cls_evaluate
|
| 41 |
+
from pycaret.regression import setup as reg_setup, compare_models as reg_compare, create_model as reg_create
|
| 42 |
+
from pycaret.regression import tune_model as reg_tune, finalize_model as reg_finalize, predict_model as reg_predict
|
| 43 |
+
from pycaret.regression import pull as reg_pull, plot_model as reg_plot, evaluate_model as reg_evaluate
|
| 44 |
+
PYCARET_AVAILABLE = True
|
| 45 |
+
except ImportError:
|
| 46 |
+
PYCARET_AVAILABLE = False
|
| 47 |
+
st.warning("PyCaret not installed. AutoML features will be limited.")
|
| 48 |
+
|
| 49 |
+
# Data profiling
|
| 50 |
+
#try:
|
| 51 |
+
# from ydata_profiling import ProfileReport
|
| 52 |
+
# from streamlit_pandas_profiling import st_profile_report
|
| 53 |
+
# PROFILING_AVAILABLE = True
|
| 54 |
+
#except ImportError:
|
| 55 |
+
# PROFILING_AVAILABLE = False
|
| 56 |
+
|
| 57 |
+
# PyTorch for deep learning
|
| 58 |
+
try:
|
| 59 |
+
import torch
|
| 60 |
+
import torch.nn as nn
|
| 61 |
+
import torch.optim as optim
|
| 62 |
+
from torch.utils.data import TensorDataset, DataLoader
|
| 63 |
+
TORCH_AVAILABLE = True
|
| 64 |
+
except ImportError:
|
| 65 |
+
TORCH_AVAILABLE = False
|
| 66 |
+
|
| 67 |
+
# SHAP for explainability
|
| 68 |
+
try:
|
| 69 |
+
import shap
|
| 70 |
+
SHAP_AVAILABLE = True
|
| 71 |
+
except ImportError:
|
| 72 |
+
SHAP_AVAILABLE = False
|
| 73 |
+
# Scikit-learn imports
|
| 74 |
+
from sklearn.preprocessing import LabelEncoder, StandardScaler
|
| 75 |
+
from sklearn.linear_model import LinearRegression, LogisticRegression
|
| 76 |
+
from sklearn.tree import DecisionTreeRegressor, DecisionTreeClassifier
|
| 77 |
+
from sklearn.ensemble import RandomForestRegressor, RandomForestClassifier
|
| 78 |
+
from sklearn.metrics import mean_squared_error, mean_absolute_error, r2_score
|
| 79 |
+
from sklearn.metrics import accuracy_score, precision_score, recall_score, f1_score, confusion_matrix
|
| 80 |
+
|
| 81 |
+
# ================== UPLOADING THE DATA ==================
|
| 82 |
+
|
| 83 |
+
df = pd.read_csv("ocd_patient_dataset.csv")
|
| 84 |
+
|
| 85 |
+
# ================== CUSTOM CSS & STYLING ==================
|
| 86 |
+
st.set_page_config(
|
| 87 |
+
page_title="OCD Diagnosing",
|
| 88 |
+
layout="wide",
|
| 89 |
+
initial_sidebar_state="expanded",
|
| 90 |
+
page_icon="π"
|
| 91 |
+
)
|
| 92 |
+
|
| 93 |
+
st.markdown("""
|
| 94 |
+
<style>
|
| 95 |
+
/* Main styling */
|
| 96 |
+
.main {
|
| 97 |
+
background: linear-gradient(135deg, #667eea 0%, #764ba2 100%);
|
| 98 |
+
font-family: 'Arial', sans-serif;
|
| 99 |
+
}
|
| 100 |
+
|
| 101 |
+
/* Sidebar styling */
|
| 102 |
+
.sidebar .sidebar-content {
|
| 103 |
+
background: linear-gradient(180deg, #2C3E50, #3498DB);
|
| 104 |
+
color: white;
|
| 105 |
+
}
|
| 106 |
+
|
| 107 |
+
/* Button styling */
|
| 108 |
+
.stButton > button {
|
| 109 |
+
background: linear-gradient(45deg, #FF6B6B, #4ECDC4);
|
| 110 |
+
color: white;
|
| 111 |
+
border: none;
|
| 112 |
+
border-radius: 25px;
|
| 113 |
+
padding: 0.6rem 1.5rem;
|
| 114 |
+
font-weight: bold;
|
| 115 |
+
transition: all 0.3s ease;
|
| 116 |
+
box-shadow: 0 4px 15px 0 rgba(31, 38, 135, 0.37);
|
| 117 |
+
}
|
| 118 |
+
|
| 119 |
+
.stButton > button:hover {
|
| 120 |
+
transform: translateY(-2px);
|
| 121 |
+
box-shadow: 0 8px 25px 0 rgba(31, 38, 135, 0.37);
|
| 122 |
+
}
|
| 123 |
+
|
| 124 |
+
/* Metric styling */
|
| 125 |
+
.metric-container {
|
| 126 |
+
background: rgba(255, 255, 255, 0.1);
|
| 127 |
+
backdrop-filter: blur(10px);
|
| 128 |
+
border-radius: 15px;
|
| 129 |
+
padding: 1rem;
|
| 130 |
+
margin: 0.5rem 0;
|
| 131 |
+
border: 1px solid rgba(255, 255, 255, 0.2);
|
| 132 |
+
}
|
| 133 |
+
|
| 134 |
+
/* Header styling */
|
| 135 |
+
.main-header {
|
| 136 |
+
text-align: center;
|
| 137 |
+
padding: 2rem 0;
|
| 138 |
+
background: rgba(255, 255, 255, 0.1);
|
| 139 |
+
backdrop-filter: blur(10px);
|
| 140 |
+
border-radius: 20px;
|
| 141 |
+
margin-bottom: 2rem;
|
| 142 |
+
border: 1px solid rgba(255, 255, 255, 0.2);
|
| 143 |
+
}
|
| 144 |
+
|
| 145 |
+
/* Success/Error messages */
|
| 146 |
+
.stSuccess, .stError, .stWarning {
|
| 147 |
+
border-radius: 10px;
|
| 148 |
+
border: none;
|
| 149 |
+
}
|
| 150 |
+
</style>
|
| 151 |
+
""", unsafe_allow_html=True)
|
| 152 |
+
|
| 153 |
+
# ================== HEADER ==================
|
| 154 |
+
st.markdown("""
|
| 155 |
+
<div class="main-header">
|
| 156 |
+
<h1 style="color: white; font-size: 3rem; margin-bottom: 0;">OCD Diagnosing</h1>
|
| 157 |
+
<p style="color: rgba(255,255,255,0.8); font-size: 1.2rem;">
|
| 158 |
+
Test different factors on their predicibility of OCD using ML Models
|
| 159 |
+
</p>
|
| 160 |
+
</div>
|
| 161 |
+
""", unsafe_allow_html=True)
|
| 162 |
+
|
| 163 |
+
# ================== AUTHENTICATION ==================
|
| 164 |
+
def check_authentication():
|
| 165 |
+
if 'authenticated' not in st.session_state:
|
| 166 |
+
st.session_state.authenticated = False
|
| 167 |
+
|
| 168 |
+
if not st.session_state.authenticated:
|
| 169 |
+
with st.sidebar:
|
| 170 |
+
st.header("π Authentication")
|
| 171 |
+
password = st.text_input("Enter Password", type="password", key="auth_password")
|
| 172 |
+
col1, col2 = st.columns(2)
|
| 173 |
+
with col1:
|
| 174 |
+
if st.button("π Login", key="login_btn"):
|
| 175 |
+
if password == "diagnosis testing":
|
| 176 |
+
st.session_state.authenticated = True
|
| 177 |
+
st.success("β
Access Granted!")
|
| 178 |
+
st.rerun()
|
| 179 |
+
else:
|
| 180 |
+
st.error("β Incorrect Password")
|
| 181 |
+
with col2:
|
| 182 |
+
if st.button("π€ Demo Mode", key="demo_btn"):
|
| 183 |
+
st.session_state.authenticated = True
|
| 184 |
+
st.session_state.demo_mode = True
|
| 185 |
+
st.info("π Demo Mode Activated")
|
| 186 |
+
st.rerun()
|
| 187 |
+
|
| 188 |
+
st.info("π Please authenticate to access the application")
|
| 189 |
+
st.stop()
|
| 190 |
+
|
| 191 |
+
check_authentication()
|
| 192 |
+
|
| 193 |
+
# ================== SESSION STATE INITIALIZATION ==================
|
| 194 |
+
if 'df' not in st.session_state:
|
| 195 |
+
st.session_state.df = None
|
| 196 |
+
if 'trained_models' not in st.session_state:
|
| 197 |
+
st.session_state.trained_models = {}
|
| 198 |
+
if 'pycaret_setup_done' not in st.session_state:
|
| 199 |
+
st.session_state.pycaret_setup_done = False
|
| 200 |
+
if 'best_model' not in st.session_state:
|
| 201 |
+
st.session_state.best_model = None
|
| 202 |
+
if 'dl_models' not in st.session_state:
|
| 203 |
+
st.session_state.dl_models = {}
|
| 204 |
+
if 'training_history' not in st.session_state:
|
| 205 |
+
st.session_state.training_history = {}
|
| 206 |
+
|
| 207 |
+
# ================== SIDEBAR NAVIGATION ==================
|
| 208 |
+
#PAGES
|
| 209 |
+
st.sidebar.title("π§ Navigation")
|
| 210 |
+
pages = [
|
| 211 |
+
"π Home",
|
| 212 |
+
"π Data Viz",
|
| 213 |
+
"π€ Logistical Regression",
|
| 214 |
+
"π³ Decision Tree",
|
| 215 |
+
"Model Comparison"
|
| 216 |
+
]
|
| 217 |
+
#"π MLflow Tracking",
|
| 218 |
+
|
| 219 |
+
selected_page = st.sidebar.selectbox("Select Page", pages, key="page_selector")
|
| 220 |
+
|
| 221 |
+
|
| 222 |
+
# ================== PAGE CONTENT ==================
|
| 223 |
+
|
| 224 |
+
if selected_page == "π Home":
|
| 225 |
+
col1, col2, col3 = st.columns([1, 2, 1])
|
| 226 |
+
|
| 227 |
+
with col2:
|
| 228 |
+
st.markdown("""
|
| 229 |
+
## OCD Diagnosis Deep Dive
|
| 230 |
+
|
| 231 |
+
About the data
|
| 232 |
+
There is an ongoing issue of misdiagnosis among mental illnesses, like OCD. Machine Learning has the ability to make diagnosing easier.
|
| 233 |
+
This app aims to use factors such as OCD Diagnosis Date, Duration of Symptoms in months, Previous Diagnoses, Family History of OCD,
|
| 234 |
+
Obsession Type, and Compulsion Type, to see if we accurately predict the obession and/or compulsion type.
|
| 235 |
+
|
| 236 |
+
""")
|
| 237 |
+
|
| 238 |
+
st.table(df.head())
|
| 239 |
+
|
| 240 |
+
|
| 241 |
+
#DATA VIZ
|
| 242 |
+
elif selected_page == "π Data Viz":
|
| 243 |
+
filtds = df.drop(columns=["Patient ID"])
|
| 244 |
+
|
| 245 |
+
col_x = st.selectbox("Select X-axis variable (group by)", filtds.columns)
|
| 246 |
+
col_y = st.selectbox("Select Y-axis variable (numeric)", filtds.columns)
|
| 247 |
+
|
| 248 |
+
tab1, tab2, tab3, tab4 = st.tabs(["Box plot", "Bar Chart π","Line Chart π","Correlation Heatmap π₯",])
|
| 249 |
+
|
| 250 |
+
with tab1:
|
| 251 |
+
st.subheader("Box plot")
|
| 252 |
+
fig, ax = plt.subplots()
|
| 253 |
+
sns.boxplot(data=df, x=col_x, y=col_y, ax=ax)
|
| 254 |
+
ax.set_title(f"{col_y} by {col_x}")
|
| 255 |
+
st.pyplot(fig)
|
| 256 |
+
|
| 257 |
+
with tab2:
|
| 258 |
+
st.subheader("Bar Chart")
|
| 259 |
+
st.bar_chart(df[[col_x,col_y]].sort_values(by=col_x),use_container_width=True)
|
| 260 |
+
|
| 261 |
+
with tab3:
|
| 262 |
+
st.subheader("Line Chart")
|
| 263 |
+
st.line_chart(df[[col_x,col_y]].sort_values(by=col_x),use_container_width=True)
|
| 264 |
+
|
| 265 |
+
with tab4:
|
| 266 |
+
st.subheader("Correlation Matrix")
|
| 267 |
+
df_numeric = df.select_dtypes(include=np.number)
|
| 268 |
+
|
| 269 |
+
ct = pd.crosstab(df[col_x], df[col_y])
|
| 270 |
+
sns.heatmap(ct, annot=True, fmt='d', cmap='Blues')
|
| 271 |
+
plt.xlabel(col_y)
|
| 272 |
+
plt.ylabel(col_x)
|
| 273 |
+
plt.title(f"Heatmap of {col_x} vs {col_y}")
|
| 274 |
+
|
| 275 |
+
#LOG REG
|
| 276 |
+
elif selected_page == "π€ Logistical Regression":
|
| 277 |
+
st.header("Running a Logistical Regression on our data...")
|
| 278 |
+
|
| 279 |
+
target_variable = st.selectbox(
|
| 280 |
+
"Select which variable you would like to predict:",
|
| 281 |
+
["Y-BOCS Score (Obsessions)", "Y-BOCS Score (Compulsions)", "Depression Diagnosis", "Anxiety Diagnosis"]
|
| 282 |
+
)
|
| 283 |
+
if st.button("Train Model"):
|
| 284 |
+
with st.spinner("Training model..."):
|
| 285 |
+
try:
|
| 286 |
+
df_sampled = df.sample(n=500, random_state=42)
|
| 287 |
+
X = df_sampled.drop(columns=[target_variable])
|
| 288 |
+
X = X.select_dtypes(include=["number"])
|
| 289 |
+
y = df_sampled[target_variable]
|
| 290 |
+
|
| 291 |
+
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2, random_state=42)
|
| 292 |
+
|
| 293 |
+
scaler = StandardScaler()
|
| 294 |
+
X_train_scaled = scaler.fit_transform(X_train)
|
| 295 |
+
X_test_scaled = scaler.transform(X_test)
|
| 296 |
+
|
| 297 |
+
model = LogisticRegression()
|
| 298 |
+
model.fit(X_train_scaled, y_train)
|
| 299 |
+
|
| 300 |
+
y_pred = model.predict(X_test_scaled)
|
| 301 |
+
|
| 302 |
+
st.write("### Accuracy:", accuracy_score(y_test, y_pred))
|
| 303 |
+
st.write("### Classification Report:")
|
| 304 |
+
st.text(classification_report(y_test, y_pred))
|
| 305 |
+
|
| 306 |
+
st.subheader("π SHAP Summary Plot for Logistic Regression")
|
| 307 |
+
fig2 = shap.plots.beeswarm(shap_values, show=False)
|
| 308 |
+
st.pyplot(bbox_inches='tight')
|
| 309 |
+
plt.clf()
|
| 310 |
+
|
| 311 |
+
except Exception as e:
|
| 312 |
+
st.error(f"β Error training model: {str(e)}")
|
| 313 |
+
|
| 314 |
+
elif selected_page == "π³ Decision Tree":
|
| 315 |
+
st.header("Predictions via decision tree...")
|
| 316 |
+
|
| 317 |
+
target_variable = st.selectbox(
|
| 318 |
+
"Select which variable you would like to predict:",
|
| 319 |
+
["Y-BOCS Score (Obsessions)", "Y-BOCS Score (Compulsions)", "Depression Diagnosis", "Anxiety Diagnosis"]
|
| 320 |
+
)
|
| 321 |
+
|
| 322 |
+
X = df.drop(columns=[target_variable])
|
| 323 |
+
X = X.select_dtypes(include=["number"])
|
| 324 |
+
X = X.fillna(X.mean())
|
| 325 |
+
y = df[target_variable]
|
| 326 |
+
|
| 327 |
+
# split
|
| 328 |
+
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2, random_state=42)
|
| 329 |
+
|
| 330 |
+
# train tree
|
| 331 |
+
dt_model = DecisionTreeClassifier(max_depth=5, random_state=42) # You can adjust depth
|
| 332 |
+
dt_model.fit(X_train, y_train)
|
| 333 |
+
|
| 334 |
+
y_pred = dt_model.predict(X_test)
|
| 335 |
+
|
| 336 |
+
st.write("### π³ Decision Tree Performance")
|
| 337 |
+
st.write("**Accuracy:**", accuracy_score(y_test, y_pred))
|
| 338 |
+
st.write("**Classification Report:**")
|
| 339 |
+
st.text(classification_report(y_test, y_pred))
|
| 340 |
+
|
| 341 |
+
explainer = shap.Explainer(dt_model, X_test)
|
| 342 |
+
shap_values = explainer(X_test)
|
| 343 |
+
|
| 344 |
+
# Summary plot (global feature importance)
|
| 345 |
+
st.subheader("π SHAP Summary Plot")
|
| 346 |
+
fig1 = shap.plots.beeswarm(shap_values, show=False)
|
| 347 |
+
st.pyplot(bbox_inches='tight')
|
| 348 |
+
plt.clf()
|
| 349 |
+
|
| 350 |
+
|
| 351 |
+
elif selected_page == "Model Comparison":
|
| 352 |
+
st.header("Decision Tree vs Logistic Regression")
|
| 353 |
+
|
| 354 |
+
target_variable = st.selectbox(
|
| 355 |
+
"π― Select the target variable to predict:",
|
| 356 |
+
["Y-BOCS Score (Obsessions)", "Y-BOCS Score (Compulsions)", "Depression Diagnosis", "Anxiety Diagnosis"])
|
| 357 |
+
|
| 358 |
+
df_sampled = df.sample(n=500, random_state=42)
|
| 359 |
+
X = df_sampled.drop(columns=[target_variable])
|
| 360 |
+
X = X.select_dtypes(include=["number"])
|
| 361 |
+
X = X.fillna(X.mean())
|
| 362 |
+
y = df_sampled[target_variable]
|
| 363 |
+
|
| 364 |
+
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2, random_state=42)
|
| 365 |
+
|
| 366 |
+
scaler = StandardScaler()
|
| 367 |
+
X_train_scaled = scaler.fit_transform(X_train)
|
| 368 |
+
X_test_scaled = scaler.transform(X_test)
|
| 369 |
+
|
| 370 |
+
logreg = LogisticRegression(max_iter=1000)
|
| 371 |
+
dtree = DecisionTreeClassifier(max_depth=5, random_state=42)
|
| 372 |
+
|
| 373 |
+
mlflow.set_tracking_uri("http://127.0.0.1:5000")
|
| 374 |
+
mlflow.set_experiment("OCD")
|
| 375 |
+
|
| 376 |
+
col1, col2 = st.columns(2)
|
| 377 |
+
with col1:
|
| 378 |
+
with mlflow.start_run(run_name="Decision Tree"):
|
| 379 |
+
dtree.fit(X_train, y_train)
|
| 380 |
+
y_pred_tree = dtree.predict(X_test)
|
| 381 |
+
y_proba_tree = dtree.predict_proba(X_test)[:, 1]
|
| 382 |
+
|
| 383 |
+
st.markdown("### πΏ Decision Tree")
|
| 384 |
+
st.write("**Accuracy:**", accuracy_score(y_test, y_pred_tree))
|
| 385 |
+
st.text(classification_report(y_test, y_pred_tree))
|
| 386 |
+
|
| 387 |
+
cm_tree = confusion_matrix(y_test, y_pred_tree)
|
| 388 |
+
fig1, ax1 = plt.subplots()
|
| 389 |
+
sns.heatmap(cm_tree, annot=True, fmt='d', cmap='Greens', ax=ax1)
|
| 390 |
+
ax1.set_title("Decision Tree Confusion Matrix")
|
| 391 |
+
st.pyplot(fig1)
|
| 392 |
+
plt.close(fig1)
|
| 393 |
+
|
| 394 |
+
st.session_state.trained_models = st.session_state.get("trained_models", {})
|
| 395 |
+
st.session_state.trained_models["Decision Tree"] = {
|
| 396 |
+
"model": dtree,
|
| 397 |
+
"features": X.columns.tolist(),
|
| 398 |
+
"target": target_variable,
|
| 399 |
+
"predictions": y_pred_tree,
|
| 400 |
+
"y_test": y_test,
|
| 401 |
+
"problem_type": "Classification"
|
| 402 |
+
}
|
| 403 |
+
|
| 404 |
+
|
| 405 |
+
with col2:
|
| 406 |
+
with mlflow.start_run(run_name="Logistic Regression"):
|
| 407 |
+
logreg.fit(X_train_scaled, y_train)
|
| 408 |
+
y_pred_log = logreg.predict(X_test_scaled)
|
| 409 |
+
y_proba_log = logreg.predict_proba(X_test_scaled)[:, 1]
|
| 410 |
+
|
| 411 |
+
st.markdown("### π Logistic Regression")
|
| 412 |
+
st.write("**Accuracy:**", accuracy_score(y_test, y_pred_log))
|
| 413 |
+
st.text(classification_report(y_test, y_pred_log))
|
| 414 |
+
|
| 415 |
+
cm_log = confusion_matrix(y_test, y_pred_log)
|
| 416 |
+
fig2, ax2 = plt.subplots()
|
| 417 |
+
sns.heatmap(cm_log, annot=True, fmt='d', cmap='Blues', ax=ax2)
|
| 418 |
+
ax2.set_title("Logistic Regression Confusion Matrix")
|
| 419 |
+
st.pyplot(fig2)
|
| 420 |
+
plt.close(fig2)
|
| 421 |
+
|
| 422 |
+
st.session_state.trained_models = st.session_state.get("trained_models", {})
|
| 423 |
+
st.session_state.trained_models["Logistic Regression"] = {
|
| 424 |
+
"model": logreg,
|
| 425 |
+
"features": X.columns.tolist(),
|
| 426 |
+
"target": target_variable,
|
| 427 |
+
"predictions": y_pred_log,
|
| 428 |
+
"y_test": y_test,
|
| 429 |
+
"problem_type": "Classification"
|
| 430 |
+
}
|
| 431 |
+
|
| 432 |
+
|
| 433 |
+
|
| 434 |
+
# elif selected_page == "π MLflow Tracking":
|
| 435 |
+
# st.header("π MLflow Experiment Tracking")
|
| 436 |
+
|
| 437 |
+
# # --- MLflow config section ---
|
| 438 |
+
# st.subheader("βοΈ MLflow Configuration")
|
| 439 |
+
# tracking_uri = st.text_input("π Tracking URI", value="http://localhost:5000")
|
| 440 |
+
# experiment_name = st.text_input("π§ͺ Experiment Name", value="my_local_experiment")
|
| 441 |
+
|
| 442 |
+
# if st.button("π§ Set MLflow Configuration"):
|
| 443 |
+
# try:
|
| 444 |
+
# mlflow.set_tracking_uri(tracking_uri)
|
| 445 |
+
# mlflow.set_experiment(experiment_name)
|
| 446 |
+
# st.success("β
MLflow configured successfully!")
|
| 447 |
+
# except Exception as e:
|
| 448 |
+
# st.error(f"β Failed to set MLflow config: {str(e)}")
|
| 449 |
+
|
| 450 |
+
# # --- Log trained model ---
|
| 451 |
+
# st.subheader("π€ Log Trained Model to MLflow")
|
| 452 |
+
|
| 453 |
+
# if st.session_state.get("trained_models"):
|
| 454 |
+
# model_name = st.selectbox("Select a model to log:", list(st.session_state.trained_models.keys()))
|
| 455 |
+
# if st.button("π₯ Log This Model"):
|
| 456 |
+
# model_data = st.session_state.trained_models[model_name]
|
| 457 |
+
# try:
|
| 458 |
+
# with mlflow.start_run(run_name=f"{model_name}_{datetime.now().strftime('%Y%m%d_%H%M%S')}"):
|
| 459 |
+
# # Log model
|
| 460 |
+
# mlflow.sklearn.log_model(model_data["model"], "model")
|
| 461 |
+
|
| 462 |
+
# # Log params
|
| 463 |
+
# mlflow.log_param("model_type", model_name)
|
| 464 |
+
# mlflow.log_param("target", model_data["target"])
|
| 465 |
+
# mlflow.log_param("features", len(model_data["features"]))
|
| 466 |
+
|
| 467 |
+
# # Log metrics
|
| 468 |
+
# y_test = model_data["y_test"]
|
| 469 |
+
# y_pred = model_data["predictions"]
|
| 470 |
+
# if model_data["problem_type"] == "Classification":
|
| 471 |
+
# acc = accuracy_score(y_test, y_pred)
|
| 472 |
+
# mlflow.log_metric("accuracy", acc)
|
| 473 |
+
# else:
|
| 474 |
+
# mlflow.log_metric("mse", mean_squared_error(y_test, y_pred))
|
| 475 |
+
# mlflow.log_metric("r2", r2_score(y_test, y_pred))
|
| 476 |
+
# mlflow.log_metric("mae", mean_absolute_error(y_test, y_pred))
|
| 477 |
+
|
| 478 |
+
# st.success("β
Model logged to MLflow!")
|
| 479 |
+
# except Exception as e:
|
| 480 |
+
# st.error(f"β Error logging model: {str(e)}")
|
| 481 |
+
# else:
|
| 482 |
+
# st.info("No models found. Train some models first!")
|
| 483 |
+
|
| 484 |
+
# # --- View past runs ---
|
| 485 |
+
# st.subheader("π Recent Experiment Runs")
|
| 486 |
+
|
| 487 |
+
# if st.button("π Refresh Runs"):
|
| 488 |
+
# try:
|
| 489 |
+
# runs_df = mlflow.search_runs(order_by=["start_time desc"])
|
| 490 |
+
# if not runs_df.empty:
|
| 491 |
+
# st.dataframe(
|
| 492 |
+
# runs_df[[
|
| 493 |
+
# 'run_id',
|
| 494 |
+
# 'status',
|
| 495 |
+
# 'start_time',
|
| 496 |
+
# 'params.model_type',
|
| 497 |
+
# 'params.target',
|
| 498 |
+
# 'metrics.accuracy', # This will show NaN for regression
|
| 499 |
+
# 'metrics.mse',
|
| 500 |
+
# 'metrics.r2'
|
| 501 |
+
# ]],
|
| 502 |
+
# use_container_width=True
|
| 503 |
+
# )
|
| 504 |
+
# else:
|
| 505 |
+
# st.info("π No runs found.")
|
| 506 |
+
# except Exception as e:
|
| 507 |
+
# st.error(f"β Error fetching runs: {str(e)}")
|
| 508 |
+
|
| 509 |
+
|
| 510 |
+
|
| 511 |
+
# ================== SIDEBAR ! ==================
|
| 512 |
+
|
| 513 |
+
# Help section
|
| 514 |
+
st.sidebar.markdown("---")
|
| 515 |
+
st.sidebar.subheader("Where to go...")
|
| 516 |
+
st.sidebar.markdown("""
|
| 517 |
+
1. π Home
|
| 518 |
+
2. π Data Viz
|
| 519 |
+
3. π€ Logistical Regression
|
| 520 |
+
4. π³ Decision Tree
|
| 521 |
+
5. Model Comparison
|
| 522 |
+
|
| 523 |
+
""")
|
| 524 |
|
| 525 |
+
#6. π MLflow Tracking
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
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|
|
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