Update app.py
Browse files
app.py
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from datasets import load_dataset
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from datasets import Dataset
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from langchain.docstore.document import Document as LangchainDocument
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from sentence_transformers import SentenceTransformer
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import faiss
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import pandas as pd
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import time
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import torch
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from transformers import AutoTokenizer
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from transformers import AutoModelForCausalLM
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from transformers import TextIteratorStreamer
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from threading import Thread
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dataset = load_dataset("Namitg02/Test", split='train', streaming=False)
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#dataset = load_dataset("epfl-llm/guidelines", split='train')
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#Returns a list of dictionaries, each representing a row in the dataset.
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length = len(dataset)
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#
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#
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df['embeddings'] = df['text'].apply(lambda x: embedding_model.encode(x))
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# add_embeddings as a new column
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print("check1a")
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print(df.iloc[[1]])
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dataset = Dataset.from_pandas(df)
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print("check1b")
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embedding_dim = embedding_model.get_sentence_embedding_dimension()
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# Returns dimensions of embedidng
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data = dataset
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d = 384 # vectors dimension
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m = 32 # hnsw parameter. Higher is more accurate but takes more time to index (default is 32, 128 should be ok)
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#index = faiss.IndexHNSWFlat(d, m)
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index = faiss.IndexFlatL2(embedding_dim)
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data.add_faiss_index("embeddings", custom_index=index)
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#data.add_faiss_index("embeddings")
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# adds an index column for the embeddings
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print("check1d")
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#question = "How can I reverse Diabetes?"
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SYS_PROMPT = """You are an assistant for answering questions.
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You are given the extracted parts of
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If you don't know the answer, just say "I do not know." Don't make up an answer."""
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# Provides context of how to answer the question
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print("check2")
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model = AutoModelForCausalLM.from_pretrained(llm_model)
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# Initializing the text generation model
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terminators = [
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tokenizer.eos_token_id, # End-of-Sequence Token that indicates where the model should consider the text sequence to be complete
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# indicates the end of a sequence
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def search(query: str, k: int =
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"""a function that embeds a new query and returns the most probable results"""
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embedded_query = embedding_model.encode(query) # create embedding of a new query
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scores, retrieved_examples = data.get_nearest_examples( # retrieve results
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def format_prompt(prompt,retrieved_documents,k):
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"""using the retrieved documents we will prompt the model to generate our responses"""
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PROMPT = f"Question:{prompt}\nContext:"
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for idx in range(k) :
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PROMPT+= f"{retrieved_documents['
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return PROMPT
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# Called by talk function to add retrieved documents to the prompt. Keeps adding text of retrieved documents to string taht are retreived
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print("check3")
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#print(PROMPT)
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print("check3A")
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def talk(prompt,history):
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k =
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scores , retrieved_documents = search(prompt, k) # get retrival scores and examples in dictionary format based on the prompt passed
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formatted_prompt = format_prompt(prompt,retrieved_documents,k) # create a new prompt using the retrieved documents
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# the chat template structure should be based on text generation model format
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print("check3B")
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input_ids = tokenizer.apply_chat_template(
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max_new_tokens=300,
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eos_token_id=terminators,
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do_sample=True,
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temperature=0.
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top_p=0.
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)
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# calling the model to generate response based on message/ input
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# do_sample if set to True uses strategies to select the next token from the probability distribution over the entire vocabulary
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generate_kwargs = dict(
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input_ids= input_ids,
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streamer=streamer,
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max_new_tokens=
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do_sample=True,
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top_p=0.95,
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temperature=0.
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eos_token_id=terminators,
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)
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# send additional parameters to model for generation
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yield "".join(outputs)
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print("check3H")
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TITLE = "AI Copilot for Diabetes Patients"
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DESCRIPTION = ""
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import gradio as gr
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# Design chatbot
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# launch chatbot and calls the talk function which in turn calls other functions
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print("check3I")
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demo.launch()
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from datasets import load_dataset
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from datasets import Dataset
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#from langchain.docstore.document import Document as LangchainDocument
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# from langchain.memory import ConversationBufferMemory
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from sentence_transformers import SentenceTransformer
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import faiss
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import time
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#import torch
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import pandas as pd
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from transformers import AutoTokenizer, AutoModelForCausalLM
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#from transformers import AutoModelForCausalLM, AutoModel
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from transformers import TextIteratorStreamer
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from threading import Thread
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#from transformers import LlamaForCausalLM, LlamaTokenizer
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#git lfs install
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#from ctransformers import AutoModelForCausalLM, AutoConfig, Config, AutoTokenizer
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#from huggingface_hub import InferenceClient
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from huggingface_hub import Repository, upload_file
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import os
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HF_TOKEN = os.getenv('HF_Token')
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#Log_Path="./Logfolder"
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logfile = 'DiabetesChatLog.txt'
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historylog = [{
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"Prompt": '',
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"Output": ''
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}]
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llm_model = "TinyLlama/TinyLlama-1.1B-Chat-v1.0"
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# TheBloke/Llama-2-7B-Chat-GGML , TinyLlama/TinyLlama-1.1B-Chat-v1.0 , microsoft/Phi-3-mini-4k-instruct, health360/Healix-1.1B-V1-Chat-dDPO
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# TheBloke/TinyLlama-1.1B-Chat-v1.0-GGUF and tinyllama-1.1b-chat-v1.0.Q4_K_M.gguf not working
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model = AutoModelForCausalLM.from_pretrained(llm_model)
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tokenizer = AutoTokenizer.from_pretrained(llm_model)
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#initiate model and tokenizer
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data = load_dataset("Namitg02/Test", split='train', streaming=False)
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#Returns a list of dictionaries, each representing a row in the dataset.
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length = len(data)
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embedding_model = SentenceTransformer("all-MiniLM-L6-v2")
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embedding_dim = embedding_model.get_sentence_embedding_dimension()
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# Returns dimensions of embedidng
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index = faiss.IndexFlatL2(embedding_dim)
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data.add_faiss_index("embeddings", custom_index=index)
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# adds an index column for the embeddings
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print("check1d")
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#question = "How can I reverse Diabetes?"
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SYS_PROMPT = """You are an assistant for answering questions.
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You are given the extracted parts of documents and a question. Provide a conversational answer.
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If you don't know the answer, just say "I do not know." Don't make up an answer."""
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# Provides context of how to answer the question
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print("check2")
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# memory = ConversationBufferMemory(return_messages=True)
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terminators = [
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tokenizer.eos_token_id, # End-of-Sequence Token that indicates where the model should consider the text sequence to be complete
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# indicates the end of a sequence
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def search(query: str, k: int = 2 ):
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"""a function that embeds a new query and returns the most probable results"""
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embedded_query = embedding_model.encode(query) # create embedding of a new query
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scores, retrieved_examples = data.get_nearest_examples( # retrieve results
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def format_prompt(prompt,retrieved_documents,k):
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"""using the retrieved documents we will prompt the model to generate our responses"""
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PROMPT = f"Question:{prompt}\nContext:"
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for idx in range(k) :
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PROMPT+= f"{retrieved_documents['0'][idx]}\n"
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return PROMPT
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# Called by talk function to add retrieved documents to the prompt. Keeps adding text of retrieved documents to string taht are retreived
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print("check3")
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def talk(prompt, history):
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k = 2 # number of retrieved documents
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scores , retrieved_documents = search(prompt, k) # get retrival scores and examples in dictionary format based on the prompt passed
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print(retrieved_documents.keys())
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formatted_prompt = format_prompt(prompt,retrieved_documents,k) # create a new prompt using the retrieved documents
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print(retrieved_documents['0'])
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print(formatted_prompt)
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formatted_prompt = formatted_prompt[:600] # to avoid memory issue
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# print(retrieved_documents['0'][1]
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# print(retrieved_documents['0'][2]
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print(formatted_prompt)
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messages = [{"role":"system","content":SYS_PROMPT},{"role":"user","content":formatted_prompt}]
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# binding the system context and new prompt for LLM
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# the chat template structure should be based on text generation model format
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print("check3B")
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input_ids = tokenizer.apply_chat_template(
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max_new_tokens=300,
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eos_token_id=terminators,
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do_sample=True,
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temperature=0.4,
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top_p=0.95,
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)
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# calling the model to generate response based on message/ input
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# do_sample if set to True uses strategies to select the next token from the probability distribution over the entire vocabulary
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generate_kwargs = dict(
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input_ids= input_ids,
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streamer=streamer,
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max_new_tokens= 200,
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do_sample=True,
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top_p=0.95,
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temperature=0.4,
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eos_token_id=terminators,
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# send additional parameters to model for generation
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yield "".join(outputs)
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print("check3H")
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pd.options.display.max_colwidth = 800
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outputstring = ''.join(outputs)
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global historylog
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historynew = {
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"Prompt": prompt,
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"Output": outputstring
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}
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historylog.append(historynew)
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return historylog
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print(historylog)
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# history.update({prompt: outputstring})
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# print(history)
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#print(memory_string2)
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#with open(logfile, 'a', encoding='utf-8') as f:
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# f.write(memory_string2)
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# f.write('\n')
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#f.close()
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#print(logfile)
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#logfile.push_to_hub("Namitg02/",token = HF_TOKEN)
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#memory_panda = pd.DataFrame()
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#if len(memory_panda) == 0:
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# memory_panda = pd.DataFrame(memory_string)
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#else:
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# memory_panda = memory_panda.append(memory_string, ignore_index=True)
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#print(memory_panda.iloc[[0]])
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#memory_panda.loc[len(memory_panda.index)] = ['prompt', outputstring]
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#print(memory_panda.iloc[[1]])
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#Logfile = Dataset.from_pandas(memory_panda)
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#Logfile.push_to_hub("Namitg02/Logfile",token = HF_TOKEN)
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TITLE = "AI Copilot for Diabetes Patients"
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DESCRIPTION = "I provide answers to concerns related to Diabetes"
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import gradio as gr
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# Design chatbot
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)
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# launch chatbot and calls the talk function which in turn calls other functions
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print("check3I")
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print(historylog)
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memory_panda = pd.DataFrame(historylog)
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Logfile = Dataset.from_pandas(memory_panda)
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Logfile.push_to_hub("Namitg02/Logfile",token = HF_TOKEN)
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demo.launch()
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