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US Policy Claimer β Knowledge Base Embedding & Upload Pipeline
Parses all knowledge base markdown files, generates embeddings via
Google text-embedding-004, and uploads to Supabase pgvector.
"""
import os
import re
import sys
import time
from pathlib import Path
from dotenv import load_dotenv
from google import genai
from supabase import create_client, Client
# Load .env file from project root
load_dotenv(Path(__file__).parent.parent / ".env")
# βββ Configuration βββββββββββββββββββββββββββββββββββββββββββββββ
SUPABASE_URL = os.environ.get("SUPABASE_URL")
SUPABASE_KEY = os.environ.get("SUPABASE_SERVICE_KEY")
GEMINI_API_KEY = os.environ.get("GEMINI_API_KEY")
KNOWLEDGE_BASE_DIR = Path(__file__).parent.parent / "knowledge_base"
EMBEDDING_MODEL = "gemini-embedding-001"
EMBEDDING_TASK_TYPE = "RETRIEVAL_DOCUMENT" # Optimized for document storage
TABLE_NAME = "knowledge_chunks"
def parse_knowledge_file(filepath: Path) -> list[dict]:
"""Parse a knowledge base markdown file into individual chunks."""
content = filepath.read_text(encoding="utf-8")
# Strip leading --- (first frontmatter delimiter at start of file)
content = re.sub(r'^---\n', '', content)
# Split on YAML frontmatter delimiters (---)
# Each chunk starts with --- and ends before the next ---
raw_chunks = re.split(r'\n---\n', content)
chunks = []
i = 0
while i < len(raw_chunks):
block = raw_chunks[i].strip()
# Skip empty blocks
if not block:
i += 1
continue
# Check if this block is a YAML frontmatter block
if block.startswith("concept_id:"):
yaml_block = block
# The next block should be the content
if i + 1 < len(raw_chunks):
content_block = raw_chunks[i + 1].strip()
i += 2
else:
i += 1
continue
chunk = parse_single_chunk(yaml_block, content_block)
if chunk:
chunks.append(chunk)
else:
i += 1
return chunks
def parse_single_chunk(yaml_text: str, content_text: str) -> dict | None:
"""Parse YAML frontmatter and markdown content into a structured dict."""
try:
# Parse YAML fields manually (simple key-value extraction)
def extract_field(text: str, field: str) -> str:
match = re.search(rf'^{field}:\s*(.+)$', text, re.MULTILINE)
return match.group(1).strip() if match else ""
def extract_list(text: str, field: str) -> list[str]:
match = re.search(rf'^{field}:\s*\[(.+)\]$', text, re.MULTILINE)
if match:
items = match.group(1).split(",")
return [item.strip().strip("'\"") for item in items]
return []
concept_id = extract_field(yaml_text, "concept_id")
if not concept_id:
return None
domain = extract_field(yaml_text, "domain")
jurisdiction = extract_field(yaml_text, "jurisdiction")
audience = extract_field(yaml_text, "audience")
tags = extract_list(yaml_text, "tags")
# Extract title (### heading)
title_match = re.search(r'^###\s+(.+)$', content_text, re.MULTILINE)
title = title_match.group(1).strip() if title_match else concept_id
# Extract semantic summary
summary_match = re.search(
r'\*\*Semantic Summary:\*\*\s*\n(.+?)(?=\n\n|\n\*\*)',
content_text,
re.DOTALL
)
semantic_summary = summary_match.group(1).strip() if summary_match else ""
return {
"concept_id": concept_id,
"domain": domain,
"jurisdiction": jurisdiction,
"audience": audience,
"tags": tags,
"title": title,
"semantic_summary": semantic_summary,
"full_content": content_text,
}
except Exception as e:
print(f" β οΈ Error parsing chunk: {e}")
return None
def generate_embedding(client: genai.Client, text: str) -> list[float]:
"""Generate a 768-dim embedding via Google text-embedding-004."""
# Combine semantic summary (primary) with full content for richer embedding
result = client.models.embed_content(
model=EMBEDDING_MODEL,
contents=text,
config={
"task_type": EMBEDDING_TASK_TYPE,
"output_dimensionality": 768,
},
)
return result.embeddings[0].values
def main():
# βββ Validate environment ββββββββββββββββββββββββββββββββββββ
if not SUPABASE_KEY:
print("β SUPABASE_SERVICE_KEY environment variable not set.")
print(" Export it: export SUPABASE_SERVICE_KEY='your-service-role-key'")
sys.exit(1)
if not GEMINI_API_KEY:
print("β GEMINI_API_KEY environment variable not set.")
print(" Export it: export GEMINI_API_KEY='your-gemini-api-key'")
sys.exit(1)
if not KNOWLEDGE_BASE_DIR.exists():
print(f"β Knowledge base directory not found: {KNOWLEDGE_BASE_DIR}")
sys.exit(1)
# βββ Initialize clients ββββββββββββββββββββββββββββββββββββββ
print("π Connecting to Supabase...")
supabase: Client = create_client(SUPABASE_URL, SUPABASE_KEY)
print("π€ Initializing Gemini embedding client...")
gemini_client = genai.Client(api_key=GEMINI_API_KEY)
# βββ Parse all knowledge base files ββββββββββββββββββββββββββ
md_files = sorted(KNOWLEDGE_BASE_DIR.glob("*.md"))
print(f"\nπ Found {len(md_files)} knowledge base files:")
for f in md_files:
print(f" β’ {f.name}")
all_chunks = []
for filepath in md_files:
chunks = parse_knowledge_file(filepath)
print(f" β
{filepath.name}: {len(chunks)} chunks parsed")
all_chunks.extend(chunks)
print(f"\nπ Total chunks parsed: {len(all_chunks)}")
# βββ Generate embeddings and upload ββββββββββββββββββββββββββ
print(f"\nπ Generating embeddings and uploading to Supabase...\n")
success_count = 0
error_count = 0
for i, chunk in enumerate(all_chunks, 1):
concept_id = chunk["concept_id"]
try:
# Create embedding text: combine summary + title for best retrieval
embedding_text = f"{chunk['title']}. {chunk['semantic_summary']}"
# Generate embedding
embedding = generate_embedding(gemini_client, embedding_text)
# Upsert to Supabase (insert or update if concept_id exists)
row = {
"concept_id": chunk["concept_id"],
"domain": chunk["domain"],
"jurisdiction": chunk["jurisdiction"],
"audience": chunk["audience"],
"tags": chunk["tags"],
"title": chunk["title"],
"semantic_summary": chunk["semantic_summary"],
"full_content": chunk["full_content"],
"embedding": embedding,
}
supabase.table(TABLE_NAME).upsert(
row, on_conflict="concept_id"
).execute()
print(f" [{i:02d}/{len(all_chunks)}] β
{concept_id}")
success_count += 1
# Small delay to respect rate limits
time.sleep(0.1)
except Exception as e:
print(f" [{i:02d}/{len(all_chunks)}] β {concept_id}: {e}")
error_count += 1
# βββ Summary βββββββββββββββββββββββββββββββββββββββββββββββββ
print(f"\n{'='*50}")
print(f"π Upload Complete!")
print(f" β
Successful: {success_count}")
print(f" β Errors: {error_count}")
print(f" π¦ Total: {len(all_chunks)}")
print(f"{'='*50}")
# βββ Verification query ββββββββββββββββββββββββββββββββββββββ
print(f"\nπ Verification: Testing similarity search...")
try:
test_query = "What happens when my insurance denies a claim?"
test_embedding = generate_embedding(gemini_client, test_query)
# Use the search function we created
result = supabase.rpc("search_knowledge", {
"query_embedding": test_embedding,
"match_count": 3,
}).execute()
if result.data:
print(f" Query: \"{test_query}\"")
print(f" Top 3 results:")
for r in result.data:
sim = r.get("similarity", 0)
print(f" β’ [{sim:.4f}] {r['title'][:80]}")
else:
print(" β οΈ No results returned. Check the table and search function.")
except Exception as e:
print(f" β οΈ Verification query failed: {e}")
print(f" (This is OK β the data is uploaded. The search function can be tested later.)")
if __name__ == "__main__":
main()
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