| from setuptools import setup, find_packages | |
| setup( | |
| name="bce-prediction-server", | |
| version="1.0.0", | |
| description="B-cell Epitope Prediction Server using ReCEP model", | |
| author="BCE Team", | |
| author_email="yitaoxu@cuhk.com", | |
| url="https://github.com/YitaoXU/ReCEP", | |
| packages=find_packages(), | |
| install_requires=[ | |
| "gradio>=4.44.0", | |
| "numpy>=1.26.4", | |
| "pandas>=2.1.4", | |
| "torch>=2.0.0", | |
| "biotite>=0.41.2", | |
| "biopython>=1.85", | |
| "h5py>=3.9.0", | |
| "scipy>=1.13.0", | |
| "scikit-learn>=1.5.2", | |
| "tqdm>=4.67.1", | |
| "matplotlib>=3.9.3", | |
| "seaborn>=0.13.2", | |
| "py3Dmol>=2.4.2", | |
| "prettytable>=3.16.0", | |
| "cloudpathlib>=0.16.0", | |
| "requests>=2.31.0", | |
| "pillow>=10.1.0", | |
| "fastapi>=0.104.1", | |
| "uvicorn>=0.24.0", | |
| "python-multipart>=0.0.6", | |
| "jinja2>=3.1.2", | |
| "aiofiles>=23.2.1", | |
| ], | |
| python_requires=">=3.8", | |
| classifiers=[ | |
| "Development Status :: 4 - Beta", | |
| "Intended Audience :: Science/Research", | |
| "License :: OSI Approved :: MIT License", | |
| "Programming Language :: Python :: 3", | |
| "Programming Language :: Python :: 3.8", | |
| "Programming Language :: Python :: 3.9", | |
| "Programming Language :: Python :: 3.10", | |
| "Programming Language :: Python :: 3.11", | |
| "Topic :: Scientific/Engineering :: Bio-Informatics", | |
| "Topic :: Scientific/Engineering :: Artificial Intelligence", | |
| ], | |
| keywords="bioinformatics protein epitope prediction machine-learning", | |
| entry_points={ | |
| "console_scripts": [ | |
| "bce-server=app:main", | |
| ], | |
| }, | |
| include_package_data=True, | |
| zip_safe=False, | |
| ) | |