Ninjani commited on
Commit
01786df
·
1 Parent(s): d5e49a8

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Files changed (1) hide show
  1. inference_app.py +2 -2
inference_app.py CHANGED
@@ -78,7 +78,7 @@ def predict(
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  if input_protein is None:
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  raise gr.Error("need input_protein")
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- ligand_file = "ligand.sdf"
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  conformer = Chem.AddHs(Chem.MolFromSmiles(input_ligand))
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  AllChem.EmbedMolecule(conformer)
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  AllChem.MMFFOptimizeMolecule(conformer)
@@ -94,7 +94,7 @@ def predict(
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  )
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  end_time = time.time()
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  run_time = end_time - start_time
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- return [input_protein.name, docking_poses[0]], run_time
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  def get_metrics(
 
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  if input_protein is None:
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  raise gr.Error("need input_protein")
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+ ligand_file = Path(input_protein).parent / "ligand.sdf"
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  conformer = Chem.AddHs(Chem.MolFromSmiles(input_ligand))
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  AllChem.EmbedMolecule(conformer)
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  AllChem.MMFFOptimizeMolecule(conformer)
 
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  )
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  end_time = time.time()
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  run_time = end_time - start_time
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+ return [input_protein.name, docking_poses[0].name], run_time
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  def get_metrics(