fixing linting issues

adding idsr define tool and reflecting tweaks to other scripts and notebooks

reducing chunks retrieved and adding retrieved chunks to display

cleaning up organization of scripts and data and updating filepaths in app to processed data

updating RAG with semantic search and reranker

fixing none status for site code and expanding rag chunks to five

adding id and sitecodes to dropdown and formatting

fixing module imports for phi filter

adding county-disease matrix

fixing linting issues

fixing linting issues

resolving conflicts

Add Docker containers 4 Clinical Assistant deploym

fixing imports in state types

FIX: Resolving minor merge conflicts

fixing linting issues

cleaning up conversation flow and adding summarization

CHORE: Minor change to logger.py

Migrate project from pip to UV package manager

fixing disclaimer presentation

linting

cleaning llm loading

separating out assistant node and cleaning up llm loading to main file

adding phi detection

working version that properly return AI messages from all tools

added idsr check and updated gradio app

tweaking answer generation prompt

adding sql pull from start

adding table definitions to sys message

setting state to shared

adding more data

using mistral for answer generation

updating states to separate conversation and data

adding main.py with multiple tools to invoke

adding sql agent

adding guidance rag agent