app.py

from flask import Flask, request, render_template, send_file
from transformers import AutoModelForTokenClassification, AutoTokenizer, pipeline
from collections import Counter
import datetime, json
import os

app = Flask(__name__)

try:
    # Load model from local files
    model = AutoModelForTokenClassification.from_pretrained("bioelectra_model", local_files_only=True)
    tokenizer = AutoTokenizer.from_pretrained("bioelectra_model", local_files_only=True)
    nlp = pipeline("token-classification", model=model, tokenizer=tokenizer, aggregation_strategy="simple")
    print("Pipeline loaded successfully!")
except Exception as e:
    print(f"Error loading pipeline: {str(e)}")
    raise

# Main route
@app.route("/", methods=["GET", "POST"])
def index():
    predictions = []
    tag_labels = []
    tag_counts = []
    input_text = ""

    if request.method == "POST":
        input_text = request.form["input_text"]
        print("User Input:", input_text)
        print("Tokenized:", tokenizer.tokenize(input_text))
        predictions = nlp(input_text)
        print("Predictions:", predictions)
        if not predictions:
            return "Error: No medical abbreviation detected in the input.", 400


        log_entry = {
            "timestamp": str(datetime.datetime.now()),
            "input": input_text,
            "predictions": predictions
        }

        # Save and print log in the log tab
        with open("log.jsonl", "a") as f:
            f.write(json.dumps(log_entry, default=str) + "\n")

        print("\n--- LOG FILE CONTENTS ---")
        with open("log.jsonl", "r") as f:
            for line in f:
                print(line.strip())
        print("--- END OF LOG ---\n")

        label_counter = Counter([item["entity_group"] for item in predictions])
        tag_labels = list(label_counter.keys())
        tag_counts = list(label_counter.values())

    return render_template("index.html", predictions=predictions, input_text=input_text,
                           tag_labels=tag_labels, tag_counts=tag_counts)

# Route to view log
@app.route("/view_log")
def view_log():
    with open("log.jsonl", "r") as f:
        contents = f.read()
    return f"<pre>{contents}</pre>"

# Route to download the log
@app.route("/download_log")
def download_log():
    return send_file("log.jsonl", as_attachment=True)

if __name__ == "__main__":
    port = int(os.environ.get("PORT", 7860))
    app.run(host="0.0.0.0", port=port)