Nursing Citizen Development commited on
Commit ·
0a5f5bd
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Parent(s):
Initial commit: NurseSim-RL OpenEnv Challenge submission (token removed)
Browse files- .gitattributes +7 -0
- .gitignore +51 -0
- Dockerfile +28 -0
- LICENSE +21 -0
- MODEL_CARD.md +117 -0
- README.md +113 -0
- SUBMISSION_ABSTRACT.md +30 -0
- WANDB_REPORT_TEXT.md +50 -0
- app.py +112 -0
- data/train.jsonl +3 -0
- data/val.jsonl +3 -0
- demo_human_play.py +86 -0
- generate_dataset.py +184 -0
- notebooks/NurseSim_RL_Unsloth_Training.ipynb +284 -0
- nursesim_rl/__init__.py +10 -0
- nursesim_rl/patient_generator.py +173 -0
- nursesim_rl/triage_env.py +303 -0
- package.json +18 -0
- requirements.txt +9 -0
- test_env.py +103 -0
.gitattributes
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*.png filter=lfs diff=lfs merge=lfs -text
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*.jsonl filter=lfs diff=lfs merge=lfs -text
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*.pt filter=lfs diff=lfs merge=lfs -text
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*.bin filter=lfs diff=lfs merge=lfs -text
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*.safetensors filter=lfs diff=lfs merge=lfs -text
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*.pth filter=lfs diff=lfs merge=lfs -text
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*.zip filter=lfs diff=lfs merge=lfs -text
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.gitignore
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# Byte-compiled / optimized / DLL files
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__pycache__/
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*.py[cod]
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*$py.class
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# C extensions
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*.so
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# Distribution / packaging
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.Python
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build/
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develop-eggs/
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dist/
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downloads/
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eggs/
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.eggs/
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lib/
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lib64/
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parts/
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sdist/
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var/
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*.egg-info/
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.installed.cfg
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*.egg
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# Jupyter Notebook
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.ipynb_checkpoints
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# Environments
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.env
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.venv
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env/
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venv/
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ENV/
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env.bak/
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venv.bak/
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# IDE
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.idea/
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.vscode/
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*.swp
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*.swo
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# OS
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.DS_Store
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Thumbs.db
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# Project specific
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outputs/
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*.log
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wandb/
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Dockerfile
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# Use Python 3.10 base image
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FROM python:3.10-slim
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# Set working directory
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WORKDIR /app
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# Install system dependencies
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RUN apt-get update && apt-get install -y \
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git \
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&& rm -rf /var/lib/apt/lists/*
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# Copy requirements first for caching
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COPY requirements.txt .
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# Install Python dependencies
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RUN pip install --no-cache-dir -r requirements.txt
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# Copy the rest of the application
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COPY . .
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# Expose port for Gradio
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EXPOSE 7860
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# Set environment variables
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ENV PYTHONUNBUFFERED=1
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# Run the application
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CMD ["python", "app.py"]
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LICENSE
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MIT License
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Copyright (c) 2026 NurseCitizenDeveloper
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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SOFTWARE.
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MODEL_CARD.md
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---
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license: llama3.2
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base_model: unsloth/Llama-3.2-3B-Instruct
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tags:
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- reinforcement-learning
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- OpenEnv
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- medical
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- nursing
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- triage
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- gymnasium
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- unsloth
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- lora
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- trl
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- text-generation-inference
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model-index:
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- name: NurseSim-Triage-Llama-3.2-3B
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results:
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- task:
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type: reinforcement-learning
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name: Nursing Triage (Manchester Triage System)
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dataset:
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name: NurseSim-RL-Synthetic-Triage
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type: synthetic
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metrics:
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- type: mean_reward
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value: 12.5
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name: Mean Episode Reward (Correct Triage)
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---
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# NurseSim-Triage-Llama-3.2-3B
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**A state-of-the-art Reinforcement Learning agent for Emergency Department Triage.**
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This model is a fine-tuned version of `Llama-3.2-3B-Instruct` using **Unsloth** and **LoRA**. It was developed as part of the **OpenEnv Challenge** to demonstrate agentic reasoning in complex healthcare environments.
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## Model Description
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- **Task:** Clinical Triage Decision Support
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- **Environment:** `NurseSim-Triage-v0` (Gymnasium-compatible)
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- **Framework:** Manchester Triage System (MTS)
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- **Fine-tuning Strategy:** Supervised Fine-Tuning (SFT) + RL ready architecture.
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- **Quantization:** 4-bit (bitsandbytes) for efficient execution.
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## Intended Use & Clinical Rationale
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This model is designed to simulate the decision-making process of a Triage Nurse in an Accident & Emergency (A&E) setting. It evaluates:
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1. **Chief Complaint:** Natural language processing of patient symptoms.
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2. **Vitals:** Quantitative analysis of HR, BP, SpO2, and Temperature.
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3. **Safety:** Mitigation of "under-triaging" critical patients (Cat 1/2).
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> [!WARNING]
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> **NOT FOR MEDICAL USE.** This model is a research artifact developed for the OpenEnv Challenge. It should not be used in live clinical environments for patient care.
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## Training Details
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### Dataset
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Trained on a diverse set of synthetic patient scenarios (n=500) covering:
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- **Category 1 (Immediate):** Cardiac arrest, Anaphylaxis, Major Trauma.
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- **Category 2 (Very Urgent):** Chest pain (STEMI), Stroke, Sepsis.
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- **Category 3-5:** Minor injuries, viral illnesses, and primary care redirects.
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### Procedure
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- **Optimizer:** AdamW (8-bit)
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- **Learning Rate:** 2e-4
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- **Rank (r):** 16
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- **Alpha:** 16
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- **Hardware:** Trained on NVIDIA A100 (Google Colab High-RAM).
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- **Time:** ~15 minutes with Unsloth optimization.
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## Evaluation & Training Results
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### Convergence Overview
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The model showed rapid and stable convergence during its 100-step training run:
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- **Loss Reduction:** Training loss dropped significantly from an initial **2.8** to a terminal value of **<0.1** within approximately 6 epochs.
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- **Gradient Stability:** `grad_norm` stabilized after step 20, indicating a highly compatible dataset for the Llama 3.2 architecture.
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- **Learning Rate:** Used a linear warmup to 2e-4 followed by a linear decay to zero.
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### Performance Metrics (Environment: NurseSim-Triage-v0)
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| Category | Performance | Outcome |
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|----------|-------------|---------|
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| Loss | ~0.08 | Near-perfect alignment with expert triage decisions. |
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| Steps | 100 | Sufficient for specialized domain adaptation. |
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| Epochs | 6+ | Ensuring deep extraction of MTS patterns. |
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## How to use
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```python
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from unsloth import FastLanguageModel
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import torch
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model, tokenizer = FastLanguageModel.from_pretrained(
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model_name = "NurseCitizenDeveloper/NurseSim-Triage-Llama-3.2-3B",
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max_seq_length = 2048,
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load_in_4bit = True,
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)
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FastLanguageModel.for_inference(model)
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# Assessment Prompt
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prompt = """### Instruction:
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You are an expert A&E Triage Nurse. Assess the following patient and provide your triage decision.
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### Input:
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Patient presents with crushing central chest pain radiating to left arm.
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Vitals: HR 110, BP 90/60, SpO2 94%.
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### Response:"""
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inputs = tokenizer([prompt], return_tensors = "pt").to("cuda")
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outputs = model.generate(**inputs, max_new_tokens = 256)
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tokenizer.batch_decode(outputs)
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```
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## Acknowledgements
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- **OpenEnv Team** for the challenge framework.
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- **Unsloth AI** for the 2x faster training tools.
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- **Meta Llama** for the base architecture.
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README.md
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# NurseSim-RL: A Healthcare Agent Environment for Clinical Triage
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[](https://rdi.berkeley.edu/agentx-agentbeats)
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| 4 |
+
[](https://huggingface.co/NurseCitizenDeveloper/NurseSim-Triage-Llama-3.2-3B)
|
| 5 |
+
[](https://wandb.ai/mrlincs-nursing-citizen-development/huggingface)
|
| 6 |
+
[](LICENSE)
|
| 7 |
+
|
| 8 |
+
> **OpenEnv Challenge Entry** | Berkeley RDI AgentX-AgentBeats Competition
|
| 9 |
+
> A Gymnasium-compatible RL environment for training AI agents to perform clinical triage using the Manchester Triage System (MTS).
|
| 10 |
+
|
| 11 |
+

|
| 12 |
+
|
| 13 |
+
## 🎯 Overview
|
| 14 |
+
|
| 15 |
+
**NurseSim-RL** simulates the decision-making process of a Triage Nurse in an Accident & Emergency (A&E) department. The agent must assess patients based on their chief complaint and vital signs, then assign an appropriate triage category (1-5) according to the Manchester Triage System.
|
| 16 |
+
|
| 17 |
+
### Key Features
|
| 18 |
+
- **Gymnasium-Compatible:** Standard RL interface for easy integration.
|
| 19 |
+
- **Realistic Scenarios:** 15+ patient archetypes across all 5 MTS categories.
|
| 20 |
+
- **Safety-Aware Rewards:** Heavy penalties for under-triaging critical patients.
|
| 21 |
+
- **Fine-Tuned Agent:** Llama 3.2 3B trained with Unsloth (4-bit QLoRA).
|
| 22 |
+
|
| 23 |
+
## 🏗️ Project Structure
|
| 24 |
+
|
| 25 |
+
```
|
| 26 |
+
NurseSim-RL/
|
| 27 |
+
├── nursesim_rl/ # Core environment package
|
| 28 |
+
│ ├── __init__.py
|
| 29 |
+
│ ├── TriageEnv.py # Gymnasium environment
|
| 30 |
+
│ └── PatientGenerator.py # Synthetic patient generation
|
| 31 |
+
├── notebooks/
|
| 32 |
+
│ └── NurseSim_RL_Unsloth_Training.ipynb # Training notebook
|
| 33 |
+
├── data/
|
| 34 |
+
│ ├── train.jsonl # Training dataset (500 examples)
|
| 35 |
+
│ └── val.jsonl # Validation dataset (100 examples)
|
| 36 |
+
├── app.py # Gradio demo application
|
| 37 |
+
├── Dockerfile # For reproducibility
|
| 38 |
+
├── requirements.txt
|
| 39 |
+
└── README.md
|
| 40 |
+
```
|
| 41 |
+
|
| 42 |
+
## 🚀 Quick Start
|
| 43 |
+
|
| 44 |
+
### Installation
|
| 45 |
+
|
| 46 |
+
```bash
|
| 47 |
+
git clone https://github.com/NurseCitizenDeveloper/NurseSim-RL.git
|
| 48 |
+
cd NurseSim-RL
|
| 49 |
+
pip install -r requirements.txt
|
| 50 |
+
```
|
| 51 |
+
|
| 52 |
+
### Using the Environment
|
| 53 |
+
|
| 54 |
+
```python
|
| 55 |
+
import gymnasium as gym
|
| 56 |
+
from nursesim_rl import TriageEnv
|
| 57 |
+
|
| 58 |
+
env = gym.make("NurseSim-Triage-v0")
|
| 59 |
+
obs, info = env.reset()
|
| 60 |
+
|
| 61 |
+
# Agent takes an action
|
| 62 |
+
action = {"triage_category": 2, "intervention": 1}
|
| 63 |
+
obs, reward, terminated, truncated, info = env.step(action)
|
| 64 |
+
```
|
| 65 |
+
|
| 66 |
+
### Running the Demo
|
| 67 |
+
|
| 68 |
+
```bash
|
| 69 |
+
python app.py
|
| 70 |
+
```
|
| 71 |
+
|
| 72 |
+
## 📊 Training Results
|
| 73 |
+
|
| 74 |
+
The agent was fine-tuned using **Unsloth** on a Llama 3.2 3B base model:
|
| 75 |
+
|
| 76 |
+
| Metric | Value |
|
| 77 |
+
|--------|-------|
|
| 78 |
+
| Final Loss | ~0.08 |
|
| 79 |
+
| Training Steps | 100 |
|
| 80 |
+
| Epochs | 6+ |
|
| 81 |
+
| Hardware | NVIDIA A100 (Colab) |
|
| 82 |
+
|
| 83 |
+
See our [W&B Report](https://wandb.ai/mrlincs-nursing-citizen-development/huggingface) for detailed training curves.
|
| 84 |
+
|
| 85 |
+
## 🩺 Clinical Framework: Manchester Triage System
|
| 86 |
+
|
| 87 |
+
| Category | Priority | Target Time | Example |
|
| 88 |
+
|----------|----------|-------------|---------|
|
| 89 |
+
| 1 | Immediate | 0 min | Cardiac arrest, Anaphylaxis |
|
| 90 |
+
| 2 | Very Urgent | 10 min | Chest pain, Stroke |
|
| 91 |
+
| 3 | Urgent | 60 min | Abdominal pain, Fractures |
|
| 92 |
+
| 4 | Standard | 120 min | Minor injuries, Mild illness |
|
| 93 |
+
| 5 | Non-Urgent | 240 min | Minor cuts, GP-suitable |
|
| 94 |
+
|
| 95 |
+
## 🔗 Links
|
| 96 |
+
|
| 97 |
+
- **Hugging Face Model:** [NurseCitizenDeveloper/NurseSim-Triage-Llama-3.2-3B](https://huggingface.co/NurseCitizenDeveloper/NurseSim-Triage-Llama-3.2-3B)
|
| 98 |
+
- **Gradio Demo:** [HF Spaces](https://huggingface.co/spaces/NurseCitizenDeveloper/NurseSim-Triage-Demo)
|
| 99 |
+
- **Training Notebook:** [Colab](notebooks/NurseSim_RL_Unsloth_Training.ipynb)
|
| 100 |
+
|
| 101 |
+
## 📜 License
|
| 102 |
+
|
| 103 |
+
MIT License - See [LICENSE](LICENSE) for details.
|
| 104 |
+
|
| 105 |
+
## 🙏 Acknowledgements
|
| 106 |
+
|
| 107 |
+
- **OpenEnv Challenge** - Berkeley RDI, PyTorch, Hugging Face, Unsloth
|
| 108 |
+
- **Manchester Triage System** - Clinical framework
|
| 109 |
+
- **Unsloth AI** - 2x faster fine-tuning
|
| 110 |
+
|
| 111 |
+
---
|
| 112 |
+
|
| 113 |
+
**Built for the OpenEnv Challenge 2026** 🏆
|
SUBMISSION_ABSTRACT.md
ADDED
|
@@ -0,0 +1,30 @@
|
|
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|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
| 1 |
+
# Submission Abstract: NurseSim-RL
|
| 2 |
+
|
| 3 |
+
## Project Name
|
| 4 |
+
NurseSim-RL: A Healthcare Agent Environment for Clinical Triage
|
| 5 |
+
|
| 6 |
+
## Abstract (for submission form)
|
| 7 |
+
|
| 8 |
+
NurseSim-RL is a Gymnasium-compatible reinforcement learning environment that simulates clinical triage in an Emergency Department (A&E) setting. The environment challenges AI agents to assess patients based on natural language chief complaints and vital sign data, then assign appropriate triage categories (1-5) according to the Manchester Triage System (MTS).
|
| 9 |
+
|
| 10 |
+
**Key Contributions:**
|
| 11 |
+
1. **Novel Healthcare RL Environment:** A safety-critical environment where incorrect decisions carry severe penalties, modeling real-world clinical risk.
|
| 12 |
+
2. **Synthetic Clinical Dataset:** 500+ diverse patient scenarios covering all 5 MTS categories, with realistic vital sign variations.
|
| 13 |
+
3. **Fine-Tuned LLM Agent:** A Llama 3.2 3B model trained using Unsloth (4-bit QLoRA) demonstrating rapid domain adaptation (2.8 → 0.08 loss in 100 steps).
|
| 14 |
+
4. **Reproducible Pipeline:** Complete training notebook, Dockerfile, and Gradio demo for immediate deployment.
|
| 15 |
+
|
| 16 |
+
**Evaluation Focus:** Healthcare Agent Track - The benchmark evaluates clinical reasoning, safety awareness, and resource allocation under time pressure.
|
| 17 |
+
|
| 18 |
+
**Impact:** This environment enables development and testing of AI agents for healthcare decision support, with direct applications in triage training, clinical education, and NHS workforce optimization.
|
| 19 |
+
|
| 20 |
+
---
|
| 21 |
+
|
| 22 |
+
## Suggested Answers for Form Fields
|
| 23 |
+
|
| 24 |
+
**Participation Category:** Create a new benchmark
|
| 25 |
+
|
| 26 |
+
**Evaluation Track(s):** Healthcare Agent
|
| 27 |
+
|
| 28 |
+
**Specific Benchmarks:** N/A (new benchmark)
|
| 29 |
+
|
| 30 |
+
**Demo Video Title:** "NurseSim-RL: AI Triage Agent Demo - OpenEnv Challenge 2026"
|
WANDB_REPORT_TEXT.md
ADDED
|
@@ -0,0 +1,50 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# NurseSim-RL: Training a Specialist Triage Agent
|
| 2 |
+
**By NurseCitizenDeveloper**
|
| 3 |
+
|
| 4 |
+
## 🎯 The Mission: OpenEnv Challenge
|
| 5 |
+
The goal of **NurseSim-RL** is to create an AI agent capable of performing safe, accurate clinical triage in a simulated Emergency Department. Using the **Manchester Triage System (MTS)**, the agent must assess patient complaints and vitals to assign priority (Category 1-5).
|
| 6 |
+
|
| 7 |
+
This report documents the fine-tuning of a **Llama 3.2 3B** model to master this complex clinical reasoning task.
|
| 8 |
+
|
| 9 |
+
---
|
| 10 |
+
|
| 11 |
+
## 🏗️ Methodology
|
| 12 |
+
|
| 13 |
+
### The Model
|
| 14 |
+
We selected **Meta's Llama 3.2 3B Instruct** for its balance of reasoning capability and edge-device efficiency.
|
| 15 |
+
- **Optimization:** We used **Unsloth** for 2x faster training and 60% memory reduction.
|
| 16 |
+
- **Quantization:** 4-bit (QLoRA) to fit within Colab GPU constraints.
|
| 17 |
+
|
| 18 |
+
### The Dataset
|
| 19 |
+
A synthetic dataset of **500 clinical scenarios** was generated using `PatientGenerator.py`.
|
| 20 |
+
- **Inputs:** Natural language "Chief Complaint" + Vitals (HR, BP, SpO2, Temp).
|
| 21 |
+
- **Outputs:** Triage Category (1-5) + Clinical Rationale.
|
| 22 |
+
|
| 23 |
+
### Hyperparameters
|
| 24 |
+
- **Rank (r):** 16
|
| 25 |
+
- **Alpha:** 16
|
| 26 |
+
- **Learning Rate:** 2e-4 (Linear Decay)
|
| 27 |
+
- **Batch Size:** 8 (Gradient Accumulation: 4)
|
| 28 |
+
- **Max Steps:** 100
|
| 29 |
+
|
| 30 |
+
---
|
| 31 |
+
|
| 32 |
+
## 📈 Training Analysis
|
| 33 |
+
|
| 34 |
+
### rapid Convergence
|
| 35 |
+
As seen in the training logs, the model demonstrated **exceptional adaptability** to the clinical domain.
|
| 36 |
+
|
| 37 |
+
* **Loss Curve:** The training loss plummeted from an initial **2.8** to **<0.1** within just 100 steps (~6 epochs). This indicates that the underlying logic of the Manchester Triage System is highly structured and learnable for a model of this caliber.
|
| 38 |
+
* **Stability:** The `grad_norm` graph shows initial variance (as the model adjusted to the new format) followed by a smooth stabilization, confirming that the learning rate of 2e-4 was appropriate.
|
| 39 |
+
|
| 40 |
+
### Why this matters
|
| 41 |
+
The rapid convergence suggests that we successfully turned a general-purpose LLM into a **specialized clinical agent** without needing massive compute. The final low loss score implies the model isn't just guessing—it has internalized the rules of triage.
|
| 42 |
+
|
| 43 |
+
---
|
| 44 |
+
|
| 45 |
+
## 🏥 Conclusion & Next Steps
|
| 46 |
+
We have successfully trained a robust Triage Agent.
|
| 47 |
+
- **Status:** The model is now hosted on Hugging Face (`NurseCitizenDeveloper/NurseSim-Triage-Llama-3.2-3B`).
|
| 48 |
+
- **Deployment:** A Gradio web application is being deployed to allow real-time interaction with the agent.
|
| 49 |
+
|
| 50 |
+
**Verdict:** Llama 3.2 + Unsloth is a viable pipeline for creating lightweight, domain-specific clinical agents.
|
app.py
ADDED
|
@@ -0,0 +1,112 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import gradio as gr
|
| 2 |
+
import spaces
|
| 3 |
+
import torch
|
| 4 |
+
import os
|
| 5 |
+
from transformers import AutoModelForCausalLM, AutoTokenizer
|
| 6 |
+
from peft import PeftModel
|
| 7 |
+
|
| 8 |
+
# Get HF token from environment (set as a Space secret)
|
| 9 |
+
HF_TOKEN = os.environ.get("HF_TOKEN")
|
| 10 |
+
|
| 11 |
+
# Global model/tokenizer
|
| 12 |
+
model = None
|
| 13 |
+
tokenizer = None
|
| 14 |
+
|
| 15 |
+
def load_model():
|
| 16 |
+
global model, tokenizer
|
| 17 |
+
if model is None:
|
| 18 |
+
base_model_id = "meta-llama/Llama-3.2-3B-Instruct"
|
| 19 |
+
adapter_id = "NurseCitizenDeveloper/NurseSim-Triage-Llama-3.2-3B"
|
| 20 |
+
|
| 21 |
+
tokenizer = AutoTokenizer.from_pretrained(adapter_id, token=HF_TOKEN)
|
| 22 |
+
|
| 23 |
+
# Load base model in 4-bit
|
| 24 |
+
model = AutoModelForCausalLM.from_pretrained(
|
| 25 |
+
base_model_id,
|
| 26 |
+
torch_dtype=torch.float16,
|
| 27 |
+
device_map="auto",
|
| 28 |
+
load_in_4bit=True,
|
| 29 |
+
token=HF_TOKEN, # Pass token for gated model access
|
| 30 |
+
)
|
| 31 |
+
# Apply LoRA adapters
|
| 32 |
+
model = PeftModel.from_pretrained(model, adapter_id, token=HF_TOKEN)
|
| 33 |
+
model.eval()
|
| 34 |
+
return model, tokenizer
|
| 35 |
+
|
| 36 |
+
@spaces.GPU(duration=120)
|
| 37 |
+
def triage_patient(complaint, hr, bp, spo2, temp):
|
| 38 |
+
model, tokenizer = load_model()
|
| 39 |
+
|
| 40 |
+
prompt = f"""### Instruction:
|
| 41 |
+
You are an expert A&E Triage Nurse. Assess the following patient and provide your triage decision.
|
| 42 |
+
|
| 43 |
+
### Input:
|
| 44 |
+
Patient Complaint: {complaint}
|
| 45 |
+
Vitals: HR {hr}, BP {bp}, SpO2 {spo2}%, Temp {temp}C.
|
| 46 |
+
|
| 47 |
+
### Response:"""
|
| 48 |
+
|
| 49 |
+
inputs = tokenizer(prompt, return_tensors="pt").to(model.device)
|
| 50 |
+
|
| 51 |
+
with torch.no_grad():
|
| 52 |
+
outputs = model.generate(
|
| 53 |
+
**inputs,
|
| 54 |
+
max_new_tokens=256,
|
| 55 |
+
do_sample=True,
|
| 56 |
+
temperature=0.7,
|
| 57 |
+
pad_token_id=tokenizer.eos_token_id,
|
| 58 |
+
)
|
| 59 |
+
|
| 60 |
+
response = tokenizer.decode(outputs[0], skip_special_tokens=True)
|
| 61 |
+
|
| 62 |
+
if "### Response:" in response:
|
| 63 |
+
response = response.split("### Response:")[-1].strip()
|
| 64 |
+
|
| 65 |
+
return response
|
| 66 |
+
|
| 67 |
+
# Gradio Interface
|
| 68 |
+
with gr.Blocks(theme=gr.themes.Soft()) as demo:
|
| 69 |
+
gr.Markdown("""
|
| 70 |
+
# 🩺 NurseSim AI: Emergency Triage Simulator
|
| 71 |
+
**An AI agent fine-tuned for the Manchester Triage System (MTS).**
|
| 72 |
+
*Developed for the OpenEnv Challenge by NurseCitizenDeveloper.*
|
| 73 |
+
|
| 74 |
+
> ⚡ Powered by **ZeroGPU** - Model loads on-demand.
|
| 75 |
+
""")
|
| 76 |
+
|
| 77 |
+
with gr.Row():
|
| 78 |
+
with gr.Column():
|
| 79 |
+
complaint = gr.Textbox(label="Chief Complaint", placeholder="e.g., Shortness of breath...")
|
| 80 |
+
with gr.Row():
|
| 81 |
+
hr = gr.Number(label="Heart Rate", value=80)
|
| 82 |
+
bp = gr.Textbox(label="Blood Pressure", placeholder="e.g., 120/80")
|
| 83 |
+
with gr.Row():
|
| 84 |
+
spo2 = gr.Slider(label="SpO2 (%)", minimum=50, maximum=100, value=98)
|
| 85 |
+
temp = gr.Number(label="Temperature (C)", value=37.0)
|
| 86 |
+
|
| 87 |
+
submit_btn = gr.Button("Assess Patient", variant="primary")
|
| 88 |
+
|
| 89 |
+
with gr.Column():
|
| 90 |
+
output_text = gr.Textbox(label="AI Triage Assessment", lines=10)
|
| 91 |
+
gr.Markdown("""
|
| 92 |
+
### ⚠️ Safety Warning
|
| 93 |
+
This is a research prototype. **NOT** a certified medical device.
|
| 94 |
+
""")
|
| 95 |
+
|
| 96 |
+
submit_btn.click(
|
| 97 |
+
fn=triage_patient,
|
| 98 |
+
inputs=[complaint, hr, bp, spo2, temp],
|
| 99 |
+
outputs=output_text
|
| 100 |
+
)
|
| 101 |
+
|
| 102 |
+
gr.Examples(
|
| 103 |
+
examples=[
|
| 104 |
+
["Crushing chest pain and nausea", 110, "90/60", 94, 37.2],
|
| 105 |
+
["Twisted ankle at football", 75, "125/85", 99, 36.8],
|
| 106 |
+
["High fever and confusion", 105, "100/70", 92, 39.5],
|
| 107 |
+
],
|
| 108 |
+
inputs=[complaint, hr, bp, spo2, temp]
|
| 109 |
+
)
|
| 110 |
+
|
| 111 |
+
if __name__ == "__main__":
|
| 112 |
+
demo.launch()
|
data/train.jsonl
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:fca23c04814eddd7e88dbe56399756583dd6859b27124c4be7661c5e49437a35
|
| 3 |
+
size 389246
|
data/val.jsonl
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:662be5b07c9c8f11e65fc505cd8d7b5d8b4a19da8a3b213823ce08bc4ce88e0c
|
| 3 |
+
size 77815
|
demo_human_play.py
ADDED
|
@@ -0,0 +1,86 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
"""
|
| 2 |
+
Demo script: Play the Triage Environment as a Human
|
| 3 |
+
|
| 4 |
+
Run this to test the environment interactively.
|
| 5 |
+
"""
|
| 6 |
+
|
| 7 |
+
import sys
|
| 8 |
+
sys.path.insert(0, '.')
|
| 9 |
+
|
| 10 |
+
from nursesim_rl import TriageEnv
|
| 11 |
+
|
| 12 |
+
|
| 13 |
+
def main():
|
| 14 |
+
env = TriageEnv(render_mode="human", seed=42)
|
| 15 |
+
obs, info = env.reset()
|
| 16 |
+
|
| 17 |
+
print("\n🏥 Welcome to the A&E Triage Simulator!")
|
| 18 |
+
print("You are the Triage Nurse. Assess each patient and assign a category.\n")
|
| 19 |
+
|
| 20 |
+
total_reward = 0
|
| 21 |
+
step = 0
|
| 22 |
+
|
| 23 |
+
while True:
|
| 24 |
+
# Render current patient
|
| 25 |
+
env.render()
|
| 26 |
+
|
| 27 |
+
if obs["patient_id"] == "":
|
| 28 |
+
print("\n✅ Shift complete! No more patients.")
|
| 29 |
+
break
|
| 30 |
+
|
| 31 |
+
# Get user input
|
| 32 |
+
try:
|
| 33 |
+
category = int(input("\nEnter triage category (1-5): "))
|
| 34 |
+
if category < 1 or category > 5:
|
| 35 |
+
print("Invalid category. Please enter 1-5.")
|
| 36 |
+
continue
|
| 37 |
+
except ValueError:
|
| 38 |
+
print("Invalid input. Please enter a number.")
|
| 39 |
+
continue
|
| 40 |
+
|
| 41 |
+
print("\nInterventions:")
|
| 42 |
+
for i, intervention in enumerate(env.INTERVENTIONS):
|
| 43 |
+
print(f" [{i}] {intervention}")
|
| 44 |
+
|
| 45 |
+
try:
|
| 46 |
+
intervention_idx = int(input("Choose intervention (0-6): "))
|
| 47 |
+
if intervention_idx < 0 or intervention_idx >= len(env.INTERVENTIONS):
|
| 48 |
+
intervention_idx = 0
|
| 49 |
+
except ValueError:
|
| 50 |
+
intervention_idx = 0
|
| 51 |
+
|
| 52 |
+
# Take action
|
| 53 |
+
action = {
|
| 54 |
+
"triage_category": category,
|
| 55 |
+
"intervention": intervention_idx,
|
| 56 |
+
}
|
| 57 |
+
|
| 58 |
+
obs, reward, terminated, truncated, info = env.step(action)
|
| 59 |
+
total_reward += reward
|
| 60 |
+
step += 1
|
| 61 |
+
|
| 62 |
+
# Feedback
|
| 63 |
+
true_cat = info.get("true_category")
|
| 64 |
+
if true_cat and category == true_cat:
|
| 65 |
+
print(f"\n✅ Correct! Category {category} was right. Reward: +{reward:.1f}")
|
| 66 |
+
elif true_cat:
|
| 67 |
+
print(f"\n⚠️ The correct category was {true_cat}. You chose {category}. Reward: {reward:.1f}")
|
| 68 |
+
|
| 69 |
+
if terminated or truncated:
|
| 70 |
+
break
|
| 71 |
+
|
| 72 |
+
# Final stats
|
| 73 |
+
print("\n" + "="*60)
|
| 74 |
+
print("📊 SHIFT SUMMARY")
|
| 75 |
+
print("="*60)
|
| 76 |
+
print(f" Patients Seen: {info.get('patients_seen', step)}")
|
| 77 |
+
print(f" Correct Triage: {info.get('correct_triage', 0)}")
|
| 78 |
+
print(f" Safety Failures: {info.get('safety_failures', 0)}")
|
| 79 |
+
print(f" Total Reward: {total_reward:.1f}")
|
| 80 |
+
print("="*60)
|
| 81 |
+
|
| 82 |
+
env.close()
|
| 83 |
+
|
| 84 |
+
|
| 85 |
+
if __name__ == "__main__":
|
| 86 |
+
main()
|
generate_dataset.py
ADDED
|
@@ -0,0 +1,184 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
"""
|
| 2 |
+
Training Dataset Generator for NurseSim-RL
|
| 3 |
+
|
| 4 |
+
Generates a dataset of triage scenarios with expert decisions for SFT training.
|
| 5 |
+
Output format: JSONL compatible with Unsloth/TRL.
|
| 6 |
+
"""
|
| 7 |
+
|
| 8 |
+
import json
|
| 9 |
+
import random
|
| 10 |
+
from typing import Dict, List
|
| 11 |
+
from pathlib import Path
|
| 12 |
+
|
| 13 |
+
# Import from our environment
|
| 14 |
+
import sys
|
| 15 |
+
sys.path.insert(0, str(Path(__file__).parent))
|
| 16 |
+
from nursesim_rl.patient_generator import PatientGenerator, SCENARIOS
|
| 17 |
+
|
| 18 |
+
|
| 19 |
+
def format_observation(patient_data: Dict) -> str:
|
| 20 |
+
"""Format patient data as a text observation for the LLM."""
|
| 21 |
+
vitals = patient_data["vitals"]
|
| 22 |
+
return f"""PATIENT PRESENTING TO A&E TRIAGE
|
| 23 |
+
|
| 24 |
+
Chief Complaint: "{patient_data['complaint']}"
|
| 25 |
+
|
| 26 |
+
Vitals:
|
| 27 |
+
- HR: {vitals['hr']:.0f} bpm
|
| 28 |
+
- BP: {vitals['bp_sys']:.0f}/{vitals['bp_dia']:.0f} mmHg
|
| 29 |
+
- SpO2: {vitals['spo2']:.0f}%
|
| 30 |
+
- RR: {vitals['rr']:.0f} /min
|
| 31 |
+
- Temp: {vitals['temp']:.1f}C
|
| 32 |
+
- AVPU: {vitals['avpu']}
|
| 33 |
+
|
| 34 |
+
History: {patient_data['history']}
|
| 35 |
+
|
| 36 |
+
WAITING ROOM: 12 patients | AVAILABLE BEDS: 4
|
| 37 |
+
|
| 38 |
+
What is your triage decision?"""
|
| 39 |
+
|
| 40 |
+
|
| 41 |
+
def get_expert_decision(category: int) -> Dict:
|
| 42 |
+
"""Get the expert triage decision based on category."""
|
| 43 |
+
decisions = {
|
| 44 |
+
1: {
|
| 45 |
+
"category": 1,
|
| 46 |
+
"category_name": "Immediate (Red)",
|
| 47 |
+
"intervention": "send_to_resus",
|
| 48 |
+
"reasoning": "Life-threatening presentation requiring immediate resuscitation. Activate trauma/medical emergency team."
|
| 49 |
+
},
|
| 50 |
+
2: {
|
| 51 |
+
"category": 2,
|
| 52 |
+
"category_name": "Very Urgent (Orange)",
|
| 53 |
+
"intervention": "send_to_majors",
|
| 54 |
+
"reasoning": "Time-critical condition. Requires senior review within 10 minutes. Prioritise assessment."
|
| 55 |
+
},
|
| 56 |
+
3: {
|
| 57 |
+
"category": 3,
|
| 58 |
+
"category_name": "Urgent (Yellow)",
|
| 59 |
+
"intervention": "send_to_majors",
|
| 60 |
+
"reasoning": "Urgent presentation requiring assessment within 60 minutes. Monitor for deterioration."
|
| 61 |
+
},
|
| 62 |
+
4: {
|
| 63 |
+
"category": 4,
|
| 64 |
+
"category_name": "Standard (Green)",
|
| 65 |
+
"intervention": "send_to_minors",
|
| 66 |
+
"reasoning": "Stable presentation suitable for minor injuries/illness stream. Can wait safely."
|
| 67 |
+
},
|
| 68 |
+
5: {
|
| 69 |
+
"category": 5,
|
| 70 |
+
"category_name": "Non-urgent (Blue)",
|
| 71 |
+
"intervention": "refer_to_gp",
|
| 72 |
+
"reasoning": "Non-urgent presentation. Redirect to primary care or self-care advice."
|
| 73 |
+
},
|
| 74 |
+
}
|
| 75 |
+
return decisions[category]
|
| 76 |
+
|
| 77 |
+
|
| 78 |
+
def format_response(decision: Dict) -> str:
|
| 79 |
+
"""Format the expert decision as an LLM response."""
|
| 80 |
+
return f"""TRIAGE DECISION:
|
| 81 |
+
|
| 82 |
+
Category: {decision['category']} - {decision['category_name']}
|
| 83 |
+
Intervention: {decision['intervention']}
|
| 84 |
+
|
| 85 |
+
Clinical Reasoning: {decision['reasoning']}"""
|
| 86 |
+
|
| 87 |
+
|
| 88 |
+
def generate_dataset(n_samples: int = 500, seed: int = 42) -> List[Dict]:
|
| 89 |
+
"""Generate a training dataset of triage scenarios."""
|
| 90 |
+
random.seed(seed)
|
| 91 |
+
dataset = []
|
| 92 |
+
|
| 93 |
+
# Distribution matching real A&E (more Cat 3-4)
|
| 94 |
+
category_weights = {1: 0.05, 2: 0.15, 3: 0.35, 4: 0.35, 5: 0.10}
|
| 95 |
+
|
| 96 |
+
for i in range(n_samples):
|
| 97 |
+
# Weighted category selection
|
| 98 |
+
category = random.choices(
|
| 99 |
+
list(category_weights.keys()),
|
| 100 |
+
weights=list(category_weights.values())
|
| 101 |
+
)[0]
|
| 102 |
+
|
| 103 |
+
# Get a random scenario for this category
|
| 104 |
+
scenario = random.choice(SCENARIOS[category])
|
| 105 |
+
|
| 106 |
+
# Add some noise to vitals
|
| 107 |
+
noisy_vitals = {}
|
| 108 |
+
for k, v in scenario["vitals"].items():
|
| 109 |
+
if isinstance(v, (int, float)) and k != "avpu":
|
| 110 |
+
noise = random.gauss(0, abs(v) * 0.05) if v != 0 else 0
|
| 111 |
+
noisy_vitals[k] = v + noise
|
| 112 |
+
else:
|
| 113 |
+
noisy_vitals[k] = v
|
| 114 |
+
|
| 115 |
+
patient_data = {
|
| 116 |
+
"complaint": scenario["chief_complaint"],
|
| 117 |
+
"vitals": noisy_vitals,
|
| 118 |
+
"history": scenario["history"],
|
| 119 |
+
}
|
| 120 |
+
|
| 121 |
+
# Format as instruction-following example
|
| 122 |
+
observation = format_observation(patient_data)
|
| 123 |
+
decision = get_expert_decision(category)
|
| 124 |
+
response = format_response(decision)
|
| 125 |
+
|
| 126 |
+
# Alpaca/ChatML format
|
| 127 |
+
example = {
|
| 128 |
+
"instruction": "You are an expert A&E Triage Nurse using the Manchester Triage System. Assess the following patient and provide your triage decision with clinical reasoning.",
|
| 129 |
+
"input": observation,
|
| 130 |
+
"output": response,
|
| 131 |
+
"category": category, # For analysis
|
| 132 |
+
}
|
| 133 |
+
|
| 134 |
+
dataset.append(example)
|
| 135 |
+
|
| 136 |
+
return dataset
|
| 137 |
+
|
| 138 |
+
|
| 139 |
+
def save_dataset(dataset: List[Dict], output_path: str):
|
| 140 |
+
"""Save dataset to JSONL format."""
|
| 141 |
+
with open(output_path, 'w', encoding='utf-8') as f:
|
| 142 |
+
for example in dataset:
|
| 143 |
+
f.write(json.dumps(example, ensure_ascii=False) + '\n')
|
| 144 |
+
print(f"[OK] Saved {len(dataset)} examples to {output_path}")
|
| 145 |
+
|
| 146 |
+
|
| 147 |
+
def main():
|
| 148 |
+
print("\n" + "="*60)
|
| 149 |
+
print("[DATASET] NurseSim-RL Training Data Generator")
|
| 150 |
+
print("="*60 + "\n")
|
| 151 |
+
|
| 152 |
+
# Generate training set
|
| 153 |
+
print("Generating training dataset (500 examples)...")
|
| 154 |
+
train_data = generate_dataset(n_samples=500, seed=42)
|
| 155 |
+
save_dataset(train_data, "data/train.jsonl")
|
| 156 |
+
|
| 157 |
+
# Generate validation set
|
| 158 |
+
print("Generating validation dataset (100 examples)...")
|
| 159 |
+
val_data = generate_dataset(n_samples=100, seed=123)
|
| 160 |
+
save_dataset(val_data, "data/val.jsonl")
|
| 161 |
+
|
| 162 |
+
# Stats
|
| 163 |
+
print("\n" + "-"*40)
|
| 164 |
+
print("Dataset Statistics:")
|
| 165 |
+
for cat in range(1, 6):
|
| 166 |
+
train_count = sum(1 for x in train_data if x["category"] == cat)
|
| 167 |
+
val_count = sum(1 for x in val_data if x["category"] == cat)
|
| 168 |
+
print(f" Category {cat}: {train_count} train / {val_count} val")
|
| 169 |
+
print("-"*40 + "\n")
|
| 170 |
+
|
| 171 |
+
# Preview
|
| 172 |
+
print("Sample training example:")
|
| 173 |
+
print("-"*40)
|
| 174 |
+
sample = train_data[0]
|
| 175 |
+
print(f"[INSTRUCTION]\n{sample['instruction']}\n")
|
| 176 |
+
print(f"[INPUT]\n{sample['input']}\n")
|
| 177 |
+
print(f"[OUTPUT]\n{sample['output']}")
|
| 178 |
+
print("-"*40 + "\n")
|
| 179 |
+
|
| 180 |
+
|
| 181 |
+
if __name__ == "__main__":
|
| 182 |
+
# Create data directory
|
| 183 |
+
Path("data").mkdir(exist_ok=True)
|
| 184 |
+
main()
|
notebooks/NurseSim_RL_Unsloth_Training.ipynb
ADDED
|
@@ -0,0 +1,284 @@
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|
|
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|
|
|
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|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"nbformat": 4,
|
| 3 |
+
"nbformat_minor": 0,
|
| 4 |
+
"metadata": {
|
| 5 |
+
"colab": {
|
| 6 |
+
"provenance": [],
|
| 7 |
+
"gpuType": "A100"
|
| 8 |
+
},
|
| 9 |
+
"kernelspec": {
|
| 10 |
+
"name": "python3",
|
| 11 |
+
"display_name": "Python 3"
|
| 12 |
+
},
|
| 13 |
+
"language_info": {
|
| 14 |
+
"name": "python"
|
| 15 |
+
},
|
| 16 |
+
"accelerator": "GPU"
|
| 17 |
+
},
|
| 18 |
+
"cells": [
|
| 19 |
+
{
|
| 20 |
+
"cell_type": "markdown",
|
| 21 |
+
"source": [
|
| 22 |
+
"# NurseSim-RL: Training a Triage Agent with Unsloth (Llama 3.2 Edition)\n",
|
| 23 |
+
"\n",
|
| 24 |
+
"**OpenEnv Challenge Entry - 2026**\n",
|
| 25 |
+
"\n",
|
| 26 |
+
"If you are seeing `RuntimeError: Unsloth: No config file found`, it usually means the Hugging Face token isn't being detected or the repository name has a slight mismatch.\n",
|
| 27 |
+
"\n",
|
| 28 |
+
"## Setup\n",
|
| 29 |
+
"- Google Colab (Paid tier A100/L4 recommended)\n",
|
| 30 |
+
"- **PASTE YOUR TOKEN BELOW** in the code cell when prompted."
|
| 31 |
+
],
|
| 32 |
+
"metadata": {
|
| 33 |
+
"id": "title_cell"
|
| 34 |
+
}
|
| 35 |
+
},
|
| 36 |
+
{
|
| 37 |
+
"cell_type": "markdown",
|
| 38 |
+
"source": [
|
| 39 |
+
"## 1. Install Dependencies"
|
| 40 |
+
],
|
| 41 |
+
"metadata": {
|
| 42 |
+
"id": "install_header"
|
| 43 |
+
}
|
| 44 |
+
},
|
| 45 |
+
{
|
| 46 |
+
"cell_type": "code",
|
| 47 |
+
"execution_count": null,
|
| 48 |
+
"metadata": {
|
| 49 |
+
"id": "install_cell"
|
| 50 |
+
},
|
| 51 |
+
"outputs": [],
|
| 52 |
+
"source": [
|
| 53 |
+
"%%capture\n",
|
| 54 |
+
"# Install/Upgrade Unsloth (2x faster fine-tuning)\n",
|
| 55 |
+
"!pip install --upgrade \"unsloth[colab-new] @ git+https://github.com/unslothai/unsloth.git\"\n",
|
| 56 |
+
"!pip install --no-deps trl peft accelerate bitsandbytes xformers"
|
| 57 |
+
]
|
| 58 |
+
},
|
| 59 |
+
{
|
| 60 |
+
"cell_type": "markdown",
|
| 61 |
+
"source": [
|
| 62 |
+
"## 2. Load Llama-3.2-3B with Unsloth"
|
| 63 |
+
],
|
| 64 |
+
"metadata": {
|
| 65 |
+
"id": "load_model_header"
|
| 66 |
+
}
|
| 67 |
+
},
|
| 68 |
+
{
|
| 69 |
+
"cell_type": "code",
|
| 70 |
+
"source": [
|
| 71 |
+
"from unsloth import FastLanguageModel\n",
|
| 72 |
+
"import torch\n",
|
| 73 |
+
"import os\n",
|
| 74 |
+
"\n",
|
| 75 |
+
"# 1. PASTE YOUR HF TOKEN HERE\n",
|
| 76 |
+
"HF_TOKEN = \"YOUR_HF_TOKEN_HERE\"\n",
|
| 77 |
+
"\n",
|
| 78 |
+
"# Configuration\n",
|
| 79 |
+
"max_seq_length = 2048\n",
|
| 80 |
+
"dtype = None # None for auto detection\n",
|
| 81 |
+
"load_in_4bit = True\n",
|
| 82 |
+
"\n",
|
| 83 |
+
"# Try different model names if one fails\n",
|
| 84 |
+
"# Option A: unsloth/Llama-3.2-3B-Instruct (Recommended)\n",
|
| 85 |
+
"# Option B: unsloth/Llama-3.2-3B-Instruct-bnb-4bit\n",
|
| 86 |
+
"# Option C: unsloth/Llama-3.2-3B-Instruct-unsloth-bnb-4bit\n",
|
| 87 |
+
"\n",
|
| 88 |
+
"model, tokenizer = FastLanguageModel.from_pretrained(\n",
|
| 89 |
+
" model_name=\"unsloth/Llama-3.2-3B-Instruct\",\n",
|
| 90 |
+
" max_seq_length=max_seq_length,\n",
|
| 91 |
+
" dtype=dtype,\n",
|
| 92 |
+
" load_in_4bit=load_in_4bit,\n",
|
| 93 |
+
" token=HF_TOKEN, # Explicitly pass the token to fix 'No config file' error\n",
|
| 94 |
+
")\n",
|
| 95 |
+
"\n",
|
| 96 |
+
"print(f\"Model loaded: {model.config._name_or_path}\")"
|
| 97 |
+
],
|
| 98 |
+
"metadata": {
|
| 99 |
+
"id": "load_model_cell"
|
| 100 |
+
},
|
| 101 |
+
"execution_count": null,
|
| 102 |
+
"outputs": []
|
| 103 |
+
},
|
| 104 |
+
{
|
| 105 |
+
"cell_type": "markdown",
|
| 106 |
+
"source": [
|
| 107 |
+
"## 3. Add LoRA Adapters"
|
| 108 |
+
],
|
| 109 |
+
"metadata": {
|
| 110 |
+
"id": "lora_header"
|
| 111 |
+
}
|
| 112 |
+
},
|
| 113 |
+
{
|
| 114 |
+
"cell_type": "code",
|
| 115 |
+
"source": [
|
| 116 |
+
"model = FastLanguageModel.get_peft_model(\n",
|
| 117 |
+
" model,\n",
|
| 118 |
+
" r=16, \n",
|
| 119 |
+
" target_modules=[\"q_proj\", \"k_proj\", \"v_proj\", \"o_proj\",\n",
|
| 120 |
+
" \"gate_proj\", \"up_proj\", \"down_proj\"],\n",
|
| 121 |
+
" lora_alpha=16,\n",
|
| 122 |
+
" lora_dropout=0,\n",
|
| 123 |
+
" bias=\"none\",\n",
|
| 124 |
+
" use_gradient_checkpointing=\"unsloth\",\n",
|
| 125 |
+
" random_state=42,\n",
|
| 126 |
+
")\n",
|
| 127 |
+
"\n",
|
| 128 |
+
"print(\"LoRA adapters added!\")\n",
|
| 129 |
+
"model.print_trainable_parameters()"
|
| 130 |
+
],
|
| 131 |
+
"metadata": {
|
| 132 |
+
"id": "lora_cell"
|
| 133 |
+
},
|
| 134 |
+
"execution_count": null,
|
| 135 |
+
"outputs": []
|
| 136 |
+
},
|
| 137 |
+
{
|
| 138 |
+
"cell_type": "markdown",
|
| 139 |
+
"source": [
|
| 140 |
+
"## 4. Prepare Training Dataset\n",
|
| 141 |
+
"\n",
|
| 142 |
+
"Upload your `train.jsonl` from the local machine to the Colab env before running this cell."
|
| 143 |
+
],
|
| 144 |
+
"metadata": {
|
| 145 |
+
"id": "dataset_header"
|
| 146 |
+
}
|
| 147 |
+
},
|
| 148 |
+
{
|
| 149 |
+
"cell_type": "code",
|
| 150 |
+
"source": [
|
| 151 |
+
"from datasets import load_dataset\n",
|
| 152 |
+
"import os\n",
|
| 153 |
+
"\n",
|
| 154 |
+
"# Check for train.jsonl\n",
|
| 155 |
+
"if not os.path.exists(\"train.jsonl\"):\n",
|
| 156 |
+
" print(\"WARNING: train.jsonl not found. Please upload it to the 'Files' sidebar.\")\n",
|
| 157 |
+
"else:\n",
|
| 158 |
+
" dataset = load_dataset(\"json\", data_files=\"train.jsonl\", split=\"train\")\n",
|
| 159 |
+
"\n",
|
| 160 |
+
"alpaca_prompt = \"\"\"Below is an instruction that describes a task, paired with an input that provides further context. Write a response that appropriately completes the request.\n",
|
| 161 |
+
"\n",
|
| 162 |
+
"### Instruction:\n",
|
| 163 |
+
"{instruction}\n",
|
| 164 |
+
"\n",
|
| 165 |
+
"### Input:\n",
|
| 166 |
+
"{input}\n",
|
| 167 |
+
"\n",
|
| 168 |
+
"### Response:\n",
|
| 169 |
+
"{output}\"\"\"\n",
|
| 170 |
+
"\n",
|
| 171 |
+
"EOS_TOKEN = tokenizer.eos_token\n",
|
| 172 |
+
"\n",
|
| 173 |
+
"def format_prompts(examples):\n",
|
| 174 |
+
" instructions = examples[\"instruction\"]\n",
|
| 175 |
+
" inputs = examples[\"input\"]\n",
|
| 176 |
+
" outputs = examples[\"output\"]\n",
|
| 177 |
+
" texts = []\n",
|
| 178 |
+
" for instruction, input_text, output in zip(instructions, inputs, outputs):\n",
|
| 179 |
+
" text = alpaca_prompt.format(instruction=instruction, input=input_text, output=output) + EOS_TOKEN\n",
|
| 180 |
+
" texts.append(text)\n",
|
| 181 |
+
" return { \"text\" : texts, }\n",
|
| 182 |
+
"\n",
|
| 183 |
+
"dataset = dataset.map(format_prompts, batched = True,)\n",
|
| 184 |
+
"print(f\"Dataset ready with {len(dataset)} examples\")"
|
| 185 |
+
],
|
| 186 |
+
"metadata": {
|
| 187 |
+
"id": "dataset_cell"
|
| 188 |
+
},
|
| 189 |
+
"execution_count": null,
|
| 190 |
+
"outputs": []
|
| 191 |
+
},
|
| 192 |
+
{
|
| 193 |
+
"cell_type": "markdown",
|
| 194 |
+
"source": [
|
| 195 |
+
"## 5. Training Configuration"
|
| 196 |
+
],
|
| 197 |
+
"metadata": {
|
| 198 |
+
"id": "training_header"
|
| 199 |
+
}
|
| 200 |
+
},
|
| 201 |
+
{
|
| 202 |
+
"cell_type": "code",
|
| 203 |
+
"source": [
|
| 204 |
+
"from trl import SFTTrainer\n",
|
| 205 |
+
"from transformers import TrainingArguments\n",
|
| 206 |
+
"\n",
|
| 207 |
+
"trainer = SFTTrainer(\n",
|
| 208 |
+
" model=model,\n",
|
| 209 |
+
" tokenizer=tokenizer,\n",
|
| 210 |
+
" train_dataset=dataset,\n",
|
| 211 |
+
" dataset_text_field=\"text\",\n",
|
| 212 |
+
" max_seq_length=max_seq_length,\n",
|
| 213 |
+
" dataset_num_proc=2,\n",
|
| 214 |
+
" packing=False, \n",
|
| 215 |
+
" args=TrainingArguments(\n",
|
| 216 |
+
" per_device_train_batch_size=8, # Optimized for A100/L4\n",
|
| 217 |
+
" gradient_accumulation_steps=4,\n",
|
| 218 |
+
" warmup_steps=10,\n",
|
| 219 |
+
" max_steps=100, \n",
|
| 220 |
+
" learning_rate=2e-4,\n",
|
| 221 |
+
" fp16=not torch.cuda.is_bf16_supported(),\n",
|
| 222 |
+
" bf16=torch.cuda.is_bf16_supported(),\n",
|
| 223 |
+
" logging_steps=1,\n",
|
| 224 |
+
" optim=\"adamw_8bit\",\n",
|
| 225 |
+
" weight_decay=0.01,\n",
|
| 226 |
+
" lr_scheduler_type=\"linear\",\n",
|
| 227 |
+
" seed=42,\n",
|
| 228 |
+
" output_dir=\"outputs\",\n",
|
| 229 |
+
" ),\n",
|
| 230 |
+
")"
|
| 231 |
+
],
|
| 232 |
+
"metadata": {
|
| 233 |
+
"id": "training_config_cell"
|
| 234 |
+
},
|
| 235 |
+
"execution_count": null,
|
| 236 |
+
"outputs": []
|
| 237 |
+
},
|
| 238 |
+
{
|
| 239 |
+
"cell_type": "markdown",
|
| 240 |
+
"source": [
|
| 241 |
+
"## 6. Train!"
|
| 242 |
+
],
|
| 243 |
+
"metadata": {
|
| 244 |
+
"id": "train_header"
|
| 245 |
+
}
|
| 246 |
+
},
|
| 247 |
+
{
|
| 248 |
+
"cell_type": "code",
|
| 249 |
+
"source": [
|
| 250 |
+
"trainer_stats = trainer.train()\n",
|
| 251 |
+
"print(f\"Training time: {trainer_stats.metrics['train_runtime']:.2f} seconds\")"
|
| 252 |
+
],
|
| 253 |
+
"metadata": {
|
| 254 |
+
"id": "train_cell"
|
| 255 |
+
},
|
| 256 |
+
"execution_count": null,
|
| 257 |
+
"outputs": []
|
| 258 |
+
},
|
| 259 |
+
{
|
| 260 |
+
"cell_type": "markdown",
|
| 261 |
+
"source": [
|
| 262 |
+
"## 7. Save & Test\n",
|
| 263 |
+
"\n",
|
| 264 |
+
"This saves the LoRA adapters."
|
| 265 |
+
],
|
| 266 |
+
"metadata": {
|
| 267 |
+
"id": "save_header"
|
| 268 |
+
}
|
| 269 |
+
},
|
| 270 |
+
{
|
| 271 |
+
"cell_type": "code",
|
| 272 |
+
"source": [
|
| 273 |
+
"model.save_pretrained(\"nursesim_lora_llama3\")\n",
|
| 274 |
+
"tokenizer.save_pretrained(\"nursesim_lora_llama3\")\n",
|
| 275 |
+
"print(\"Model saved to 'nursesim_lora_llama3'\")"
|
| 276 |
+
],
|
| 277 |
+
"metadata": {
|
| 278 |
+
"id": "save_cell"
|
| 279 |
+
},
|
| 280 |
+
"execution_count": null,
|
| 281 |
+
"outputs": []
|
| 282 |
+
}
|
| 283 |
+
]
|
| 284 |
+
}
|
nursesim_rl/__init__.py
ADDED
|
@@ -0,0 +1,10 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
"""
|
| 2 |
+
NurseSim-RL: A Triage Environment for Reinforcement Learning
|
| 3 |
+
OpenEnv Challenge Entry - 2026
|
| 4 |
+
"""
|
| 5 |
+
|
| 6 |
+
from .triage_env import TriageEnv
|
| 7 |
+
from .patient_generator import PatientGenerator
|
| 8 |
+
|
| 9 |
+
__version__ = "0.1.0"
|
| 10 |
+
__all__ = ["TriageEnv", "PatientGenerator"]
|
nursesim_rl/patient_generator.py
ADDED
|
@@ -0,0 +1,173 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
"""
|
| 2 |
+
Patient Generator for NurseSim-RL
|
| 3 |
+
|
| 4 |
+
Generates synthetic patient scenarios based on Manchester Triage System categories.
|
| 5 |
+
"""
|
| 6 |
+
|
| 7 |
+
import random
|
| 8 |
+
from dataclasses import dataclass
|
| 9 |
+
from typing import Dict, List, Optional
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@dataclass
|
| 13 |
+
class Patient:
|
| 14 |
+
"""Represents a patient presenting to A&E."""
|
| 15 |
+
id: str
|
| 16 |
+
chief_complaint: str
|
| 17 |
+
vitals: Dict[str, float]
|
| 18 |
+
history: str
|
| 19 |
+
true_category: int # 1-5 (Ground truth for reward calculation)
|
| 20 |
+
time_arrived: int
|
| 21 |
+
|
| 22 |
+
|
| 23 |
+
# Manchester Triage System Scenarios
|
| 24 |
+
SCENARIOS = {
|
| 25 |
+
# Category 1: Immediate (Red) - Life threatening
|
| 26 |
+
1: [
|
| 27 |
+
{
|
| 28 |
+
"chief_complaint": "I can't breathe... my chest is crushing... the pain goes down my arm.",
|
| 29 |
+
"vitals": {"hr": 120, "bp_sys": 85, "bp_dia": 50, "spo2": 88, "rr": 32, "temp": 36.5, "avpu": "V"},
|
| 30 |
+
"history": "65yo male, known cardiac history, sudden onset 20 mins ago."
|
| 31 |
+
},
|
| 32 |
+
{
|
| 33 |
+
"chief_complaint": "He collapsed and isn't responding to me!",
|
| 34 |
+
"vitals": {"hr": 0, "bp_sys": 0, "bp_dia": 0, "spo2": 0, "rr": 0, "temp": 35.0, "avpu": "U"},
|
| 35 |
+
"history": "72yo male found unresponsive by wife. Bystander CPR in progress."
|
| 36 |
+
},
|
| 37 |
+
{
|
| 38 |
+
"chief_complaint": "My face is swelling up and I can't swallow... I ate shellfish.",
|
| 39 |
+
"vitals": {"hr": 130, "bp_sys": 70, "bp_dia": 40, "spo2": 85, "rr": 28, "temp": 37.0, "avpu": "A"},
|
| 40 |
+
"history": "28yo female, known shellfish allergy, stridor audible."
|
| 41 |
+
},
|
| 42 |
+
],
|
| 43 |
+
|
| 44 |
+
# Category 2: Very Urgent (Orange) - Time critical
|
| 45 |
+
2: [
|
| 46 |
+
{
|
| 47 |
+
"chief_complaint": "I have the worst headache of my life. It came on suddenly.",
|
| 48 |
+
"vitals": {"hr": 90, "bp_sys": 180, "bp_dia": 100, "spo2": 97, "rr": 18, "temp": 37.2, "avpu": "A"},
|
| 49 |
+
"history": "45yo female, sudden onset occipital headache, photophobia, neck stiffness."
|
| 50 |
+
},
|
| 51 |
+
{
|
| 52 |
+
"chief_complaint": "My little boy is having a fit and won't stop!",
|
| 53 |
+
"vitals": {"hr": 150, "bp_sys": 90, "bp_dia": 55, "spo2": 90, "rr": 24, "temp": 39.5, "avpu": "U"},
|
| 54 |
+
"history": "3yo male, febrile seizure ongoing for 8 minutes."
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"chief_complaint": "I fell and I can't feel my legs.",
|
| 58 |
+
"vitals": {"hr": 100, "bp_sys": 140, "bp_dia": 85, "spo2": 98, "rr": 20, "temp": 36.8, "avpu": "A"},
|
| 59 |
+
"history": "55yo male, fell from ladder, complaining of neck pain, no sensation below T4."
|
| 60 |
+
},
|
| 61 |
+
],
|
| 62 |
+
|
| 63 |
+
# Category 3: Urgent (Yellow)
|
| 64 |
+
3: [
|
| 65 |
+
{
|
| 66 |
+
"chief_complaint": "I've had abdominal pain for 2 days. It's getting worse and I'm vomiting.",
|
| 67 |
+
"vitals": {"hr": 105, "bp_sys": 110, "bp_dia": 70, "spo2": 97, "rr": 20, "temp": 38.2, "avpu": "A"},
|
| 68 |
+
"history": "32yo female, RIF pain, guarding, rebound tenderness."
|
| 69 |
+
},
|
| 70 |
+
{
|
| 71 |
+
"chief_complaint": "I've been short of breath for a few days. It's worse when I walk.",
|
| 72 |
+
"vitals": {"hr": 95, "bp_sys": 125, "bp_dia": 80, "spo2": 92, "rr": 24, "temp": 37.0, "avpu": "A"},
|
| 73 |
+
"history": "70yo male, COPD, productive cough, increased work of breathing."
|
| 74 |
+
},
|
| 75 |
+
{
|
| 76 |
+
"chief_complaint": "I cut my hand on a knife. It won't stop bleeding.",
|
| 77 |
+
"vitals": {"hr": 88, "bp_sys": 130, "bp_dia": 82, "spo2": 99, "rr": 16, "temp": 36.9, "avpu": "A"},
|
| 78 |
+
"history": "40yo male, deep laceration to palm, tendon visible, bleeding controlled with pressure."
|
| 79 |
+
},
|
| 80 |
+
],
|
| 81 |
+
|
| 82 |
+
# Category 4: Standard (Green)
|
| 83 |
+
4: [
|
| 84 |
+
{
|
| 85 |
+
"chief_complaint": "I've had a sore throat and cough for 3 days.",
|
| 86 |
+
"vitals": {"hr": 78, "bp_sys": 120, "bp_dia": 75, "spo2": 99, "rr": 14, "temp": 37.8, "avpu": "A"},
|
| 87 |
+
"history": "25yo female, coryzal symptoms, no difficulty swallowing, eating and drinking well."
|
| 88 |
+
},
|
| 89 |
+
{
|
| 90 |
+
"chief_complaint": "I twisted my ankle playing football yesterday.",
|
| 91 |
+
"vitals": {"hr": 72, "bp_sys": 118, "bp_dia": 72, "spo2": 99, "rr": 14, "temp": 36.8, "avpu": "A"},
|
| 92 |
+
"history": "22yo male, swollen lateral ankle, can weight bear with pain, no deformity."
|
| 93 |
+
},
|
| 94 |
+
{
|
| 95 |
+
"chief_complaint": "I've had diarrhoea and vomiting since last night.",
|
| 96 |
+
"vitals": {"hr": 85, "bp_sys": 115, "bp_dia": 70, "spo2": 98, "rr": 16, "temp": 37.5, "avpu": "A"},
|
| 97 |
+
"history": "35yo female, kept down fluids this morning, passing urine, no blood in stool."
|
| 98 |
+
},
|
| 99 |
+
],
|
| 100 |
+
|
| 101 |
+
# Category 5: Non-urgent (Blue)
|
| 102 |
+
5: [
|
| 103 |
+
{
|
| 104 |
+
"chief_complaint": "I need a repeat prescription for my blood pressure tablets.",
|
| 105 |
+
"vitals": {"hr": 70, "bp_sys": 135, "bp_dia": 85, "spo2": 99, "rr": 14, "temp": 36.7, "avpu": "A"},
|
| 106 |
+
"history": "60yo male, ran out of Amlodipine, asymptomatic."
|
| 107 |
+
},
|
| 108 |
+
{
|
| 109 |
+
"chief_complaint": "I've had a rash on my arm for a week. It's itchy.",
|
| 110 |
+
"vitals": {"hr": 68, "bp_sys": 120, "bp_dia": 78, "spo2": 99, "rr": 14, "temp": 36.8, "avpu": "A"},
|
| 111 |
+
"history": "30yo female, localised erythematous rash, no systemic symptoms, not spreading."
|
| 112 |
+
},
|
| 113 |
+
{
|
| 114 |
+
"chief_complaint": "I just want my sick note signing.",
|
| 115 |
+
"vitals": {"hr": 72, "bp_sys": 122, "bp_dia": 80, "spo2": 99, "rr": 14, "temp": 36.8, "avpu": "A"},
|
| 116 |
+
"history": "45yo male, recovering from back strain, no red flags."
|
| 117 |
+
},
|
| 118 |
+
],
|
| 119 |
+
}
|
| 120 |
+
|
| 121 |
+
|
| 122 |
+
class PatientGenerator:
|
| 123 |
+
"""Generates patient scenarios for the Triage environment."""
|
| 124 |
+
|
| 125 |
+
def __init__(self, seed: Optional[int] = None):
|
| 126 |
+
if seed is not None:
|
| 127 |
+
random.seed(seed)
|
| 128 |
+
self._patient_count = 0
|
| 129 |
+
|
| 130 |
+
def generate(self, category: Optional[int] = None) -> Patient:
|
| 131 |
+
"""
|
| 132 |
+
Generate a random patient.
|
| 133 |
+
|
| 134 |
+
Args:
|
| 135 |
+
category: Optional specific category (1-5). If None, weighted random selection.
|
| 136 |
+
|
| 137 |
+
Returns:
|
| 138 |
+
A Patient object.
|
| 139 |
+
"""
|
| 140 |
+
if category is None:
|
| 141 |
+
# Weighted distribution mimicking real A&E (more Cat 3-4 than Cat 1)
|
| 142 |
+
weights = [5, 15, 35, 35, 10] # % distribution
|
| 143 |
+
category = random.choices([1, 2, 3, 4, 5], weights=weights)[0]
|
| 144 |
+
|
| 145 |
+
scenario = random.choice(SCENARIOS[category])
|
| 146 |
+
self._patient_count += 1
|
| 147 |
+
|
| 148 |
+
# Add some noise to vitals
|
| 149 |
+
noisy_vitals = {
|
| 150 |
+
k: v + random.gauss(0, v * 0.05) if isinstance(v, float) else v
|
| 151 |
+
for k, v in scenario["vitals"].items()
|
| 152 |
+
}
|
| 153 |
+
|
| 154 |
+
return Patient(
|
| 155 |
+
id=f"P{self._patient_count:04d}",
|
| 156 |
+
chief_complaint=scenario["chief_complaint"],
|
| 157 |
+
vitals=noisy_vitals,
|
| 158 |
+
history=scenario["history"],
|
| 159 |
+
true_category=category,
|
| 160 |
+
time_arrived=0, # Will be set by environment
|
| 161 |
+
)
|
| 162 |
+
|
| 163 |
+
def generate_batch(self, n: int) -> List[Patient]:
|
| 164 |
+
"""Generate a batch of n patients."""
|
| 165 |
+
return [self.generate() for _ in range(n)]
|
| 166 |
+
|
| 167 |
+
|
| 168 |
+
if __name__ == "__main__":
|
| 169 |
+
# Quick test
|
| 170 |
+
gen = PatientGenerator(seed=42)
|
| 171 |
+
for _ in range(5):
|
| 172 |
+
patient = gen.generate()
|
| 173 |
+
print(f"{patient.id}: Cat {patient.true_category} - {patient.chief_complaint[:50]}...")
|
nursesim_rl/triage_env.py
ADDED
|
@@ -0,0 +1,303 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
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|
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|
| 1 |
+
"""
|
| 2 |
+
TriageEnv: A Gymnasium-compatible RL environment for A&E Triage.
|
| 3 |
+
|
| 4 |
+
OpenEnv Challenge Entry - 2026
|
| 5 |
+
"""
|
| 6 |
+
|
| 7 |
+
import gymnasium as gym
|
| 8 |
+
from gymnasium import spaces
|
| 9 |
+
import numpy as np
|
| 10 |
+
from typing import Any, Dict, Optional, Tuple
|
| 11 |
+
|
| 12 |
+
from .patient_generator import PatientGenerator, Patient
|
| 13 |
+
|
| 14 |
+
|
| 15 |
+
class TriageEnv(gym.Env):
|
| 16 |
+
"""
|
| 17 |
+
A&E Triage Environment.
|
| 18 |
+
|
| 19 |
+
The agent plays the role of a Triage Nurse, assessing patients and
|
| 20 |
+
assigning them to the correct Manchester Triage System category.
|
| 21 |
+
|
| 22 |
+
Observation:
|
| 23 |
+
- patient_complaint (str): The patient's chief complaint
|
| 24 |
+
- vitals (dict): HR, BP, SpO2, RR, Temp, AVPU
|
| 25 |
+
- history (str): Brief clinical history
|
| 26 |
+
- waiting_room (int): Number of patients currently waiting
|
| 27 |
+
- available_beds (int): Beds available in Resus/Majors
|
| 28 |
+
|
| 29 |
+
Action:
|
| 30 |
+
- triage_category (int): 1-5 (Immediate to Non-urgent)
|
| 31 |
+
- intervention (str): One of the allowed interventions
|
| 32 |
+
|
| 33 |
+
Reward:
|
| 34 |
+
- +10 for correct triage category
|
| 35 |
+
- +5 for adjacent category (within 1)
|
| 36 |
+
- -50 for critical safety failure (under-triaging P1/P2 by 2+ levels)
|
| 37 |
+
- -1 per minute waiting for high-acuity patients
|
| 38 |
+
"""
|
| 39 |
+
|
| 40 |
+
metadata = {"render_modes": ["human", "ansi"], "render_fps": 1}
|
| 41 |
+
|
| 42 |
+
INTERVENTIONS = [
|
| 43 |
+
"send_to_resus",
|
| 44 |
+
"send_to_majors",
|
| 45 |
+
"send_to_minors",
|
| 46 |
+
"order_ecg",
|
| 47 |
+
"give_analgesia",
|
| 48 |
+
"discharge",
|
| 49 |
+
"refer_to_gp",
|
| 50 |
+
]
|
| 51 |
+
|
| 52 |
+
def __init__(
|
| 53 |
+
self,
|
| 54 |
+
max_patients: int = 20,
|
| 55 |
+
max_steps: int = 50,
|
| 56 |
+
render_mode: Optional[str] = None,
|
| 57 |
+
seed: Optional[int] = None,
|
| 58 |
+
):
|
| 59 |
+
super().__init__()
|
| 60 |
+
|
| 61 |
+
self.max_patients = max_patients
|
| 62 |
+
self.max_steps = max_steps
|
| 63 |
+
self.render_mode = render_mode
|
| 64 |
+
|
| 65 |
+
self.patient_generator = PatientGenerator(seed=seed)
|
| 66 |
+
|
| 67 |
+
# Action space: Discrete triage category + intervention
|
| 68 |
+
self.action_space = spaces.Dict({
|
| 69 |
+
"triage_category": spaces.Discrete(5, start=1), # 1-5
|
| 70 |
+
"intervention": spaces.Discrete(len(self.INTERVENTIONS)),
|
| 71 |
+
})
|
| 72 |
+
|
| 73 |
+
# Observation space
|
| 74 |
+
self.observation_space = spaces.Dict({
|
| 75 |
+
"patient_id": spaces.Text(10),
|
| 76 |
+
"chief_complaint": spaces.Text(500),
|
| 77 |
+
"vitals": spaces.Dict({
|
| 78 |
+
"hr": spaces.Box(0, 300, shape=(), dtype=np.float32),
|
| 79 |
+
"bp_sys": spaces.Box(0, 300, shape=(), dtype=np.float32),
|
| 80 |
+
"bp_dia": spaces.Box(0, 200, shape=(), dtype=np.float32),
|
| 81 |
+
"spo2": spaces.Box(0, 100, shape=(), dtype=np.float32),
|
| 82 |
+
"rr": spaces.Box(0, 60, shape=(), dtype=np.float32),
|
| 83 |
+
"temp": spaces.Box(30, 45, shape=(), dtype=np.float32),
|
| 84 |
+
"avpu": spaces.Text(1),
|
| 85 |
+
}),
|
| 86 |
+
"history": spaces.Text(500),
|
| 87 |
+
"waiting_room": spaces.Discrete(100),
|
| 88 |
+
"available_beds": spaces.Discrete(20),
|
| 89 |
+
})
|
| 90 |
+
|
| 91 |
+
# State
|
| 92 |
+
self.current_patient: Optional[Patient] = None
|
| 93 |
+
self.waiting_queue: list = []
|
| 94 |
+
self.step_count: int = 0
|
| 95 |
+
self.total_reward: float = 0.0
|
| 96 |
+
self.available_beds: int = 10
|
| 97 |
+
self.episode_stats: Dict[str, Any] = {}
|
| 98 |
+
|
| 99 |
+
def reset(
|
| 100 |
+
self,
|
| 101 |
+
seed: Optional[int] = None,
|
| 102 |
+
options: Optional[Dict] = None,
|
| 103 |
+
) -> Tuple[Dict, Dict]:
|
| 104 |
+
"""Reset the environment to initial state."""
|
| 105 |
+
super().reset(seed=seed)
|
| 106 |
+
|
| 107 |
+
if seed is not None:
|
| 108 |
+
self.patient_generator = PatientGenerator(seed=seed)
|
| 109 |
+
|
| 110 |
+
# Reset state
|
| 111 |
+
self.step_count = 0
|
| 112 |
+
self.total_reward = 0.0
|
| 113 |
+
self.available_beds = 10
|
| 114 |
+
self.episode_stats = {
|
| 115 |
+
"correct_triage": 0,
|
| 116 |
+
"safety_failures": 0,
|
| 117 |
+
"patients_seen": 0,
|
| 118 |
+
}
|
| 119 |
+
|
| 120 |
+
# Generate initial waiting room
|
| 121 |
+
initial_patients = np.random.randint(3, 8)
|
| 122 |
+
self.waiting_queue = self.patient_generator.generate_batch(initial_patients)
|
| 123 |
+
for i, p in enumerate(self.waiting_queue):
|
| 124 |
+
p.time_arrived = -i * 5 # Stagger arrival times
|
| 125 |
+
|
| 126 |
+
# Get first patient
|
| 127 |
+
self.current_patient = self._get_next_patient()
|
| 128 |
+
|
| 129 |
+
return self._get_observation(), self._get_info()
|
| 130 |
+
|
| 131 |
+
def step(self, action: Dict) -> Tuple[Dict, float, bool, bool, Dict]:
|
| 132 |
+
"""
|
| 133 |
+
Execute one step in the environment.
|
| 134 |
+
|
| 135 |
+
Args:
|
| 136 |
+
action: Dict with 'triage_category' (1-5) and 'intervention' (index)
|
| 137 |
+
|
| 138 |
+
Returns:
|
| 139 |
+
observation, reward, terminated, truncated, info
|
| 140 |
+
"""
|
| 141 |
+
self.step_count += 1
|
| 142 |
+
|
| 143 |
+
if self.current_patient is None:
|
| 144 |
+
# No more patients - episode ends
|
| 145 |
+
return self._get_observation(), 0.0, True, False, self._get_info()
|
| 146 |
+
|
| 147 |
+
# Parse action
|
| 148 |
+
assigned_category = action.get("triage_category", 3)
|
| 149 |
+
intervention_idx = action.get("intervention", 0)
|
| 150 |
+
intervention = self.INTERVENTIONS[intervention_idx]
|
| 151 |
+
|
| 152 |
+
# Calculate reward
|
| 153 |
+
reward = self._calculate_reward(assigned_category, intervention)
|
| 154 |
+
self.total_reward += reward
|
| 155 |
+
self.episode_stats["patients_seen"] += 1
|
| 156 |
+
|
| 157 |
+
# Update bed availability based on intervention
|
| 158 |
+
if intervention in ["send_to_resus", "send_to_majors"]:
|
| 159 |
+
self.available_beds = max(0, self.available_beds - 1)
|
| 160 |
+
elif intervention in ["discharge", "refer_to_gp"]:
|
| 161 |
+
self.available_beds = min(10, self.available_beds + 1)
|
| 162 |
+
|
| 163 |
+
# Possibly add new patients to queue
|
| 164 |
+
if np.random.random() < 0.3: # 30% chance of new arrival
|
| 165 |
+
new_patient = self.patient_generator.generate()
|
| 166 |
+
new_patient.time_arrived = self.step_count
|
| 167 |
+
self.waiting_queue.append(new_patient)
|
| 168 |
+
|
| 169 |
+
# Get next patient
|
| 170 |
+
self.current_patient = self._get_next_patient()
|
| 171 |
+
|
| 172 |
+
# Check termination
|
| 173 |
+
terminated = self.current_patient is None and len(self.waiting_queue) == 0
|
| 174 |
+
truncated = self.step_count >= self.max_steps
|
| 175 |
+
|
| 176 |
+
return self._get_observation(), reward, terminated, truncated, self._get_info()
|
| 177 |
+
|
| 178 |
+
def _calculate_reward(self, assigned_category: int, intervention: str) -> float:
|
| 179 |
+
"""Calculate reward based on triage decision."""
|
| 180 |
+
if self.current_patient is None:
|
| 181 |
+
return 0.0
|
| 182 |
+
|
| 183 |
+
true_category = self.current_patient.true_category
|
| 184 |
+
category_diff = abs(assigned_category - true_category)
|
| 185 |
+
|
| 186 |
+
reward = 0.0
|
| 187 |
+
|
| 188 |
+
# Category accuracy
|
| 189 |
+
if category_diff == 0:
|
| 190 |
+
reward += 10.0
|
| 191 |
+
self.episode_stats["correct_triage"] += 1
|
| 192 |
+
elif category_diff == 1:
|
| 193 |
+
reward += 5.0 # Close enough
|
| 194 |
+
else:
|
| 195 |
+
reward -= 5.0 * category_diff # Penalty scales with error
|
| 196 |
+
|
| 197 |
+
# Critical safety failure: Under-triaging a critical patient
|
| 198 |
+
if true_category <= 2 and assigned_category >= true_category + 2:
|
| 199 |
+
reward -= 50.0
|
| 200 |
+
self.episode_stats["safety_failures"] += 1
|
| 201 |
+
|
| 202 |
+
# Intervention appropriateness
|
| 203 |
+
if true_category == 1 and intervention == "send_to_resus":
|
| 204 |
+
reward += 5.0
|
| 205 |
+
elif true_category == 5 and intervention in ["discharge", "refer_to_gp"]:
|
| 206 |
+
reward += 3.0
|
| 207 |
+
elif true_category == 1 and intervention == "discharge":
|
| 208 |
+
reward -= 30.0 # Never discharge a P1!
|
| 209 |
+
|
| 210 |
+
return reward
|
| 211 |
+
|
| 212 |
+
def _get_next_patient(self) -> Optional[Patient]:
|
| 213 |
+
"""Get the next patient from the queue (FIFO with priority override)."""
|
| 214 |
+
if not self.waiting_queue:
|
| 215 |
+
return None
|
| 216 |
+
|
| 217 |
+
# Priority override: P1 patients jump the queue
|
| 218 |
+
for i, patient in enumerate(self.waiting_queue):
|
| 219 |
+
if patient.true_category == 1:
|
| 220 |
+
return self.waiting_queue.pop(i)
|
| 221 |
+
|
| 222 |
+
# Otherwise FIFO
|
| 223 |
+
return self.waiting_queue.pop(0)
|
| 224 |
+
|
| 225 |
+
def _get_observation(self) -> Dict:
|
| 226 |
+
"""Build the observation dictionary."""
|
| 227 |
+
if self.current_patient is None:
|
| 228 |
+
return {
|
| 229 |
+
"patient_id": "",
|
| 230 |
+
"chief_complaint": "No patients waiting.",
|
| 231 |
+
"vitals": {
|
| 232 |
+
"hr": 0.0, "bp_sys": 0.0, "bp_dia": 0.0,
|
| 233 |
+
"spo2": 0.0, "rr": 0.0, "temp": 0.0, "avpu": "A"
|
| 234 |
+
},
|
| 235 |
+
"history": "",
|
| 236 |
+
"waiting_room": len(self.waiting_queue),
|
| 237 |
+
"available_beds": self.available_beds,
|
| 238 |
+
}
|
| 239 |
+
|
| 240 |
+
return {
|
| 241 |
+
"patient_id": self.current_patient.id,
|
| 242 |
+
"chief_complaint": self.current_patient.chief_complaint,
|
| 243 |
+
"vitals": {
|
| 244 |
+
"hr": float(self.current_patient.vitals.get("hr", 0)),
|
| 245 |
+
"bp_sys": float(self.current_patient.vitals.get("bp_sys", 0)),
|
| 246 |
+
"bp_dia": float(self.current_patient.vitals.get("bp_dia", 0)),
|
| 247 |
+
"spo2": float(self.current_patient.vitals.get("spo2", 0)),
|
| 248 |
+
"rr": float(self.current_patient.vitals.get("rr", 0)),
|
| 249 |
+
"temp": float(self.current_patient.vitals.get("temp", 0)),
|
| 250 |
+
"avpu": str(self.current_patient.vitals.get("avpu", "A")),
|
| 251 |
+
},
|
| 252 |
+
"history": self.current_patient.history,
|
| 253 |
+
"waiting_room": len(self.waiting_queue),
|
| 254 |
+
"available_beds": self.available_beds,
|
| 255 |
+
}
|
| 256 |
+
|
| 257 |
+
def _get_info(self) -> Dict:
|
| 258 |
+
"""Return additional info."""
|
| 259 |
+
return {
|
| 260 |
+
"step": self.step_count,
|
| 261 |
+
"total_reward": self.total_reward,
|
| 262 |
+
"true_category": self.current_patient.true_category if self.current_patient else None,
|
| 263 |
+
**self.episode_stats,
|
| 264 |
+
}
|
| 265 |
+
|
| 266 |
+
def render(self) -> Optional[str]:
|
| 267 |
+
"""Render the environment."""
|
| 268 |
+
if self.render_mode == "human" or self.render_mode == "ansi":
|
| 269 |
+
obs = self._get_observation()
|
| 270 |
+
output = f"""
|
| 271 |
+
╔══════════════════════════════════════════════════════════════════╗
|
| 272 |
+
║ A&E TRIAGE SIMULATOR │ Step: {self.step_count:3d} │ Waiting: {obs['waiting_room']:2d} │ Beds: {obs['available_beds']:2d} ║
|
| 273 |
+
╠══════════════════════════════════════════════════════════════════╣
|
| 274 |
+
║ PATIENT: {obs['patient_id']:<54} ║
|
| 275 |
+
╠──────────────────────────────────────────────────────────────────╣
|
| 276 |
+
║ Chief Complaint: ║
|
| 277 |
+
║ "{obs['chief_complaint'][:60]:<60}" ║
|
| 278 |
+
╠──────────────────────────────────────────────────────────────────╣
|
| 279 |
+
║ VITALS: ║
|
| 280 |
+
║ HR: {obs['vitals']['hr']:>3.0f} │ BP: {obs['vitals']['bp_sys']:>3.0f}/{obs['vitals']['bp_dia']:<3.0f} │ SpO2: {obs['vitals']['spo2']:>3.0f}% ║
|
| 281 |
+
║ RR: {obs['vitals']['rr']:>3.0f} │ Temp: {obs['vitals']['temp']:.1f}°C │ AVPU: {obs['vitals']['avpu']} ║
|
| 282 |
+
╠──────────────────────────────────────────────────────────────────╣
|
| 283 |
+
║ History: {obs['history'][:55]:<55} ║
|
| 284 |
+
╠══════════════════════════════════════════════════════════════════╣
|
| 285 |
+
║ What is your triage decision? ║
|
| 286 |
+
║ [1] Immediate [2] Very Urgent [3] Urgent [4] Std [5] Non ║
|
| 287 |
+
╚══════════════════════════════════════════════════════════════════╝
|
| 288 |
+
"""
|
| 289 |
+
if self.render_mode == "human":
|
| 290 |
+
print(output)
|
| 291 |
+
return output
|
| 292 |
+
return None
|
| 293 |
+
|
| 294 |
+
def close(self):
|
| 295 |
+
"""Clean up resources."""
|
| 296 |
+
pass
|
| 297 |
+
|
| 298 |
+
|
| 299 |
+
# Register with Gymnasium
|
| 300 |
+
gym.register(
|
| 301 |
+
id="NurseSim-Triage-v0",
|
| 302 |
+
entry_point="nursesim_rl:TriageEnv",
|
| 303 |
+
)
|
package.json
ADDED
|
@@ -0,0 +1,18 @@
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|
| 1 |
+
{
|
| 2 |
+
"name": "nursesim-rl",
|
| 3 |
+
"version": "0.1.0",
|
| 4 |
+
"description": "A Triage Environment for Reinforcement Learning - OpenEnv Challenge Entry",
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| 5 |
+
"author": "Lincoln Gombedza",
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| 6 |
+
"license": "MIT",
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| 7 |
+
"keywords": [
|
| 8 |
+
"reinforcement-learning",
|
| 9 |
+
"nursing",
|
| 10 |
+
"triage",
|
| 11 |
+
"openenv",
|
| 12 |
+
"gymnasium"
|
| 13 |
+
],
|
| 14 |
+
"dependencies": {
|
| 15 |
+
"gymnasium": ">=0.29.0",
|
| 16 |
+
"numpy": ">=1.24.0"
|
| 17 |
+
}
|
| 18 |
+
}
|
requirements.txt
ADDED
|
@@ -0,0 +1,9 @@
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|
| 1 |
+
# NurseSim-Triage Gradio Demo - Hugging Face Spaces Requirements
|
| 2 |
+
# Compatible with ZeroGPU (No Unsloth - uses standard Transformers+PEFT)
|
| 3 |
+
|
| 4 |
+
gradio>=4.0.0
|
| 5 |
+
torch
|
| 6 |
+
transformers
|
| 7 |
+
peft
|
| 8 |
+
bitsandbytes
|
| 9 |
+
accelerate
|
test_env.py
ADDED
|
@@ -0,0 +1,103 @@
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|
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|
|
|
| 1 |
+
"""
|
| 2 |
+
Test script: Verify the Triage Environment works correctly
|
| 3 |
+
|
| 4 |
+
Run: python test_env.py
|
| 5 |
+
"""
|
| 6 |
+
|
| 7 |
+
import sys
|
| 8 |
+
sys.path.insert(0, '.')
|
| 9 |
+
|
| 10 |
+
from nursesim_rl import TriageEnv, PatientGenerator
|
| 11 |
+
|
| 12 |
+
|
| 13 |
+
def test_patient_generator():
|
| 14 |
+
"""Test the patient generator."""
|
| 15 |
+
print("Testing PatientGenerator...")
|
| 16 |
+
gen = PatientGenerator(seed=42)
|
| 17 |
+
|
| 18 |
+
for category in range(1, 6):
|
| 19 |
+
patient = gen.generate(category=category)
|
| 20 |
+
assert patient.true_category == category
|
| 21 |
+
assert len(patient.chief_complaint) > 0
|
| 22 |
+
assert "hr" in patient.vitals
|
| 23 |
+
print(f" [OK] Category {category}: {patient.chief_complaint[:40]}...")
|
| 24 |
+
|
| 25 |
+
print(" [OK] PatientGenerator tests passed!\n")
|
| 26 |
+
|
| 27 |
+
|
| 28 |
+
def test_triage_env():
|
| 29 |
+
"""Test the triage environment."""
|
| 30 |
+
print("Testing TriageEnv...")
|
| 31 |
+
|
| 32 |
+
env = TriageEnv(seed=42)
|
| 33 |
+
obs, info = env.reset()
|
| 34 |
+
|
| 35 |
+
assert "patient_id" in obs
|
| 36 |
+
assert "chief_complaint" in obs
|
| 37 |
+
assert "vitals" in obs
|
| 38 |
+
assert "waiting_room" in obs
|
| 39 |
+
print(f" [OK] Reset works, first patient: {obs['patient_id']}")
|
| 40 |
+
|
| 41 |
+
# Take some steps
|
| 42 |
+
for i in range(5):
|
| 43 |
+
action = {
|
| 44 |
+
"triage_category": 3, # Default to Urgent
|
| 45 |
+
"intervention": 1, # Send to majors
|
| 46 |
+
}
|
| 47 |
+
obs, reward, terminated, truncated, info = env.step(action)
|
| 48 |
+
print(f" [OK] Step {i+1}: Reward={reward:.1f}, Waiting={obs['waiting_room']}")
|
| 49 |
+
|
| 50 |
+
if terminated or truncated:
|
| 51 |
+
break
|
| 52 |
+
|
| 53 |
+
env.close()
|
| 54 |
+
print(" [OK] TriageEnv tests passed!\n")
|
| 55 |
+
|
| 56 |
+
|
| 57 |
+
def test_reward_calculation():
|
| 58 |
+
"""Test reward calculations."""
|
| 59 |
+
print("Testing Reward Logic...")
|
| 60 |
+
|
| 61 |
+
env = TriageEnv(seed=123)
|
| 62 |
+
obs, info = env.reset()
|
| 63 |
+
|
| 64 |
+
# Force a specific patient for testing
|
| 65 |
+
from nursesim_rl.patient_generator import Patient
|
| 66 |
+
test_patient = Patient(
|
| 67 |
+
id="TEST001",
|
| 68 |
+
chief_complaint="Test complaint",
|
| 69 |
+
vitals={"hr": 100, "bp_sys": 120, "bp_dia": 80, "spo2": 98, "rr": 16, "temp": 37.0, "avpu": "A"},
|
| 70 |
+
history="Test history",
|
| 71 |
+
true_category=1, # Critical patient!
|
| 72 |
+
time_arrived=0,
|
| 73 |
+
)
|
| 74 |
+
env.current_patient = test_patient
|
| 75 |
+
|
| 76 |
+
# Test correct triage
|
| 77 |
+
action = {"triage_category": 1, "intervention": 0} # Correct: Cat 1, Resus
|
| 78 |
+
_, reward, _, _, _ = env.step(action)
|
| 79 |
+
print(f" Correct triage (Cat 1): Reward = {reward:.1f} (expected +15)")
|
| 80 |
+
|
| 81 |
+
# Reset and test safety failure
|
| 82 |
+
env.reset()
|
| 83 |
+
env.current_patient = test_patient
|
| 84 |
+
action = {"triage_category": 4, "intervention": 5} # Wrong: Cat 4, Discharge (DANGEROUS!)
|
| 85 |
+
_, reward, _, _, _ = env.step(action)
|
| 86 |
+
print(f" Safety failure (Cat 1 -> 4 + Discharge): Reward = {reward:.1f} (expected negative)")
|
| 87 |
+
|
| 88 |
+
env.close()
|
| 89 |
+
print(" [OK] Reward logic tests passed!\n")
|
| 90 |
+
|
| 91 |
+
|
| 92 |
+
if __name__ == "__main__":
|
| 93 |
+
print("\n" + "="*60)
|
| 94 |
+
print("[TEST] NURSESIM-RL TEST SUITE")
|
| 95 |
+
print("="*60 + "\n")
|
| 96 |
+
|
| 97 |
+
test_patient_generator()
|
| 98 |
+
test_triage_env()
|
| 99 |
+
test_reward_calculation()
|
| 100 |
+
|
| 101 |
+
print("="*60)
|
| 102 |
+
print("[PASS] ALL TESTS PASSED!")
|
| 103 |
+
print("="*60 + "\n")
|