Resolve all conflicts and deploy

.gitattributes

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Dockerfile

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+FROM python:3.13.5-slim
+
+WORKDIR /app
+
+RUN apt-get update && apt-get install -y \
+    build-essential \
+    curl \
+    git \
+    && rm -rf /var/lib/apt/lists/*
+
+COPY requirements.txt ./
+COPY src/ ./src/
+
+RUN pip3 install -r requirements.txt
+
+EXPOSE 8501
+
+HEALTHCHECK CMD curl --fail http://localhost:8501/_stcore/health
+
+ENTRYPOINT ["streamlit", "run", "src/streamlit_app.py", "--server.port=8501", "--server.address=0.0.0.0"]

README.md

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+---
+title: Virtual Gene Scope
+emoji: 🧬
+colorFrom: blue
+colorTo: green
+sdk: streamlit
+sdk_version: 1.41.1
+app_file: app.py
+pinned: false
+tags:
+- streamlit
+- nursing
+- genomics
+- alphagenome
+---
+
 # Virtual Gene Scope
 
 A nursing education tool to visualize the "Regulatory Genome" using Google DeepMind's AlphaGenome (Mocked/API).

requirements.txt

@@ -3,4 +3,4 @@ pandas
 matplotlib
 numpy
 huggingface_hub
-# alphagenome - install from git in runtime or use mock for now
+# alphagenome

src/streamlit_app.py

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+import altair as alt
+import numpy as np
+import pandas as pd
+import streamlit as st
+
+"""
+# Welcome to Streamlit!
+
+Edit `/streamlit_app.py` to customize this app to your heart's desire :heart:.
+If you have any questions, checkout our [documentation](https://docs.streamlit.io) and [community
+forums](https://discuss.streamlit.io).
+
+In the meantime, below is an example of what you can do with just a few lines of code:
+"""
+
+num_points = st.slider("Number of points in spiral", 1, 10000, 1100)
+num_turns = st.slider("Number of turns in spiral", 1, 300, 31)
+
+indices = np.linspace(0, 1, num_points)
+theta = 2 * np.pi * num_turns * indices
+radius = indices
+
+x = radius * np.cos(theta)
+y = radius * np.sin(theta)
+
+df = pd.DataFrame({
+    "x": x,
+    "y": y,
+    "idx": indices,
+    "rand": np.random.randn(num_points),
+})
+
+st.altair_chart(alt.Chart(df, height=700, width=700)
+    .mark_point(filled=True)
+    .encode(
+        x=alt.X("x", axis=None),
+        y=alt.Y("y", axis=None),
+        color=alt.Color("idx", legend=None, scale=alt.Scale()),
+        size=alt.Size("rand", legend=None, scale=alt.Scale(range=[1, 150])),
+    ))