Spaces:
Sleeping
Sleeping
Alex Zhang
commited on
Commit
·
0296716
1
Parent(s):
a34fe64
TEST
Browse files- .DS_Store +0 -0
- Benign 1.jpg +0 -0
- Benign 2.jpg +0 -0
- Benign 3.jpg +0 -0
- Malignant 1.jpg +0 -0
- Malignant 2.jpg +0 -0
- Malignant 3.jpg +0 -0
- app.ipynb +686 -0
- app.py +19 -0
- export.pkl +3 -0
- requirements.txt +2 -0
.DS_Store
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Binary file (6.15 kB). View file
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Benign 1.jpg
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Benign 2.jpg
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Benign 3.jpg
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Malignant 1.jpg
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Malignant 2.jpg
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Malignant 3.jpg
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app.ipynb
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| 1 |
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{
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"cells": [
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{
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"cell_type": "code",
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"execution_count": 1,
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Defaulting to user installation because normal site-packages is not writeable\n",
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"Collecting fastai\n",
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" Using cached fastai-2.7.12-py3-none-any.whl (233 kB)\n",
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"Collecting matplotlib\n",
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" Downloading matplotlib-3.7.1-cp39-cp39-macosx_10_12_x86_64.whl (7.4 MB)\n",
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"\u001b[K |████████████████████████████████| 7.4 MB 341 kB/s eta 0:00:01 |▏ | 51 kB 835 kB/s eta 0:00:09\n",
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"\u001b[?25hCollecting torchvision>=0.8.2\n",
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" Downloading torchvision-0.15.2-cp39-cp39-macosx_10_9_x86_64.whl (1.5 MB)\n",
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"\u001b[K |████████████████████████████████| 1.5 MB 3.7 MB/s eta 0:00:01 |█▎ | 61 kB 3.0 MB/s eta 0:00:01 |████▉ | 225 kB 3.7 MB/s eta 0:00:01\n",
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"\u001b[?25hCollecting scipy\n",
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" Downloading scipy-1.10.1-cp39-cp39-macosx_10_9_x86_64.whl (35.2 MB)\n",
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"\u001b[K |████████████████████████████████| 35.2 MB 116 kB/s eta 0:00:011 |██████████ | 11.1 MB 27.8 MB/s eta 0:00:01 |█████████████▎ | 14.5 MB 27.8 MB/s eta 0:00:01 |█████████████████████▏ | 23.3 MB 5.8 MB/s eta 0:00:03\n",
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"\u001b[?25hCollecting pyyaml\n",
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" Downloading PyYAML-6.0-cp39-cp39-macosx_10_9_x86_64.whl (197 kB)\n",
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"\u001b[K |████████████████████████████████| 197 kB 2.7 MB/s eta 0:00:0101\n",
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"\u001b[?25hCollecting fastdownload<2,>=0.0.5\n",
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" Using cached fastdownload-0.0.7-py3-none-any.whl (12 kB)\n",
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| 29 |
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"Requirement already satisfied: packaging in /Users/alex/Library/Python/3.9/lib/python/site-packages (from fastai) (23.1)\n",
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"Collecting pandas\n",
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" Downloading pandas-2.0.2-cp39-cp39-macosx_10_9_x86_64.whl (11.8 MB)\n",
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"\u001b[K |████████████████████████████████| 11.8 MB 18.7 MB/s eta 0:00:01 |█▌ | 552 kB 5.8 MB/s eta 0:00:02:00:02███████▍ | 11.2 MB 18.7 MB/s eta 0:00:01\n",
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"\u001b[?25hCollecting fastprogress>=0.2.4\n",
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" Using cached fastprogress-1.0.3-py3-none-any.whl (12 kB)\n",
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"Collecting spacy<4\n",
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" Downloading spacy-3.5.3-cp39-cp39-macosx_10_9_x86_64.whl (6.9 MB)\n",
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"\u001b[K |████████████████████████████████| 6.9 MB 2.0 MB/s eta 0:00:01 |▌ | 102 kB 2.0 MB/s eta 0:00:04\n",
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"\u001b[?25hCollecting torch<2.1,>=1.7\n",
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" Downloading torch-2.0.1-cp39-none-macosx_10_9_x86_64.whl (143.4 MB)\n",
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{
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"ename": "FileNotFoundError",
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"evalue": "[Errno 2] No such file or directory: 'Benign1.jpg'",
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| 377 |
+
"\u001b[0;32m/var/folders/gm/h3z3dxv12z73tt5_q7j7kc6h0000gn/T/ipykernel_97601/3272737616.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mim\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mPILImage\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mcreate\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'Benign1.jpg'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 2\u001b[0m \u001b[0mim\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mthumbnail\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;36m192\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;36m192\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
|
| 378 |
+
"\u001b[0;32m/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/fastai/vision/core.py\u001b[0m in \u001b[0;36mcreate\u001b[0;34m(cls, fn, **kwargs)\u001b[0m\n\u001b[1;32m 123\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0misinstance\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0mbytes\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m \u001b[0mfn\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mio\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mBytesIO\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 124\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0misinstance\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0mImage\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mImage\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m \u001b[0;32mreturn\u001b[0m \u001b[0mcls\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 125\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0mcls\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mload_image\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mmerge\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mcls\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_open_args\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 126\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 127\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0mshow\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mctx\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mNone\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
|
| 379 |
+
"\u001b[0;32m/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/fastai/vision/core.py\u001b[0m in \u001b[0;36mload_image\u001b[0;34m(fn, mode)\u001b[0m\n\u001b[1;32m 96\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0mload_image\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmode\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mNone\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 97\u001b[0m \u001b[0;34m\"Open and load a `PIL.Image` and convert to `mode`\"\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 98\u001b[0;31m \u001b[0mim\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mImage\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mopen\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 99\u001b[0m \u001b[0mim\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mload\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 100\u001b[0m \u001b[0mim\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mim\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_new\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mim\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mim\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
|
| 380 |
+
"\u001b[0;32m/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PIL/Image.py\u001b[0m in \u001b[0;36mopen\u001b[0;34m(fp, mode, formats)\u001b[0m\n\u001b[1;32m 3234\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 3235\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mfilename\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 3236\u001b[0;31m \u001b[0mfp\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mbuiltins\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mopen\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mfilename\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m\"rb\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 3237\u001b[0m \u001b[0mexclusive_fp\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;32mTrue\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 3238\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
|
| 381 |
+
"\u001b[0;31mFileNotFoundError\u001b[0m: [Errno 2] No such file or directory: 'Benign1.jpg'"
|
| 382 |
+
]
|
| 383 |
+
}
|
| 384 |
+
],
|
| 385 |
+
"source": [
|
| 386 |
+
" # im = PILImage.create('Benign1.jpg')\n",
|
| 387 |
+
" # im.thumbnail((192,192))\n"
|
| 388 |
+
]
|
| 389 |
+
},
|
| 390 |
+
{
|
| 391 |
+
"cell_type": "code",
|
| 392 |
+
"execution_count": null,
|
| 393 |
+
"metadata": {},
|
| 394 |
+
"outputs": [
|
| 395 |
+
{
|
| 396 |
+
"ename": "NotImplementedError",
|
| 397 |
+
"evalue": "cannot instantiate 'WindowsPath' on your system",
|
| 398 |
+
"output_type": "error",
|
| 399 |
+
"traceback": [
|
| 400 |
+
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
|
| 401 |
+
"\u001b[0;31mNotImplementedError\u001b[0m Traceback (most recent call last)",
|
| 402 |
+
"\u001b[0;32m/var/folders/gm/h3z3dxv12z73tt5_q7j7kc6h0000gn/T/ipykernel_97601/243768304.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mlearn\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mload_learner\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'export.pkl'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
|
| 403 |
+
"\u001b[0;32m/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/fastai/learner.py\u001b[0m in \u001b[0;36mload_learner\u001b[0;34m(fname, cpu, pickle_module)\u001b[0m\n\u001b[1;32m 444\u001b[0m \u001b[0mdistrib_barrier\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 445\u001b[0m \u001b[0mmap_loc\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;34m'cpu'\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mcpu\u001b[0m \u001b[0;32melse\u001b[0m \u001b[0mdefault_device\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 446\u001b[0;31m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m \u001b[0mres\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mtorch\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mload\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mfname\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmap_location\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mmap_loc\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mpickle_module\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mpickle_module\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 447\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mAttributeError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0me\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 448\u001b[0m \u001b[0me\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0margs\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;34m[\u001b[0m\u001b[0;34mf\"Custom classes or functions exported with your `Learner` not available in namespace.\\Re-declare/import before loading:\\n\\t{e.args[0]}\"\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
|
| 404 |
+
"\u001b[0;32m/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/torch/serialization.py\u001b[0m in \u001b[0;36mload\u001b[0;34m(f, map_location, pickle_module, weights_only, **pickle_load_args)\u001b[0m\n\u001b[1;32m 787\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mRuntimeError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0me\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 788\u001b[0m \u001b[0;32mraise\u001b[0m \u001b[0mpickle\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mUnpicklingError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mUNSAFE_MESSAGE\u001b[0m \u001b[0;34m+\u001b[0m \u001b[0mstr\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0me\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 789\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0m_load\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mopened_zipfile\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmap_location\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mpickle_module\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mpickle_load_args\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 790\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mweights_only\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 791\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
|
| 405 |
+
"\u001b[0;32m/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/torch/serialization.py\u001b[0m in \u001b[0;36m_load\u001b[0;34m(zip_file, map_location, pickle_module, pickle_file, **pickle_load_args)\u001b[0m\n\u001b[1;32m 1129\u001b[0m \u001b[0munpickler\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mUnpicklerWrapper\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mdata_file\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mpickle_load_args\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1130\u001b[0m \u001b[0munpickler\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpersistent_load\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mpersistent_load\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1131\u001b[0;31m \u001b[0mresult\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0munpickler\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mload\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 1132\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1133\u001b[0m \u001b[0mtorch\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_utils\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_validate_loaded_sparse_tensors\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
|
| 406 |
+
"\u001b[0;32m/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/pathlib.py\u001b[0m in \u001b[0;36m__new__\u001b[0;34m(cls, *args, **kwargs)\u001b[0m\n\u001b[1;32m 1023\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0;32mnot\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_flavour\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mis_supported\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1024\u001b[0m raise NotImplementedError(\"cannot instantiate %r on your system\"\n\u001b[0;32m-> 1025\u001b[0;31m % (cls.__name__,))\n\u001b[0m\u001b[1;32m 1026\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_init\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1027\u001b[0m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
|
| 407 |
+
"\u001b[0;31mNotImplementedError\u001b[0m: cannot instantiate 'WindowsPath' on your system"
|
| 408 |
+
]
|
| 409 |
+
}
|
| 410 |
+
],
|
| 411 |
+
"source": [
|
| 412 |
+
"learn = load_learner('export.pkl')"
|
| 413 |
+
]
|
| 414 |
+
},
|
| 415 |
+
{
|
| 416 |
+
"cell_type": "code",
|
| 417 |
+
"execution_count": null,
|
| 418 |
+
"metadata": {},
|
| 419 |
+
"outputs": [
|
| 420 |
+
{
|
| 421 |
+
"data": {
|
| 422 |
+
"text/plain": [
|
| 423 |
+
"('benign', tensor(0), tensor([0.8787, 0.1213]))"
|
| 424 |
+
]
|
| 425 |
+
},
|
| 426 |
+
"execution_count": 6,
|
| 427 |
+
"metadata": {},
|
| 428 |
+
"output_type": "execute_result"
|
| 429 |
+
}
|
| 430 |
+
],
|
| 431 |
+
"source": [
|
| 432 |
+
"learn.predict(im)"
|
| 433 |
+
]
|
| 434 |
+
},
|
| 435 |
+
{
|
| 436 |
+
"cell_type": "code",
|
| 437 |
+
"execution_count": null,
|
| 438 |
+
"metadata": {},
|
| 439 |
+
"outputs": [],
|
| 440 |
+
"source": [
|
| 441 |
+
"categories = ('Benign', 'Malignant')\n",
|
| 442 |
+
"\n",
|
| 443 |
+
"def classify_image(img):\n",
|
| 444 |
+
" pred,idx,probs = learn.predict(img)\n",
|
| 445 |
+
" return dict(zip(categories, map(float,probs)))"
|
| 446 |
+
]
|
| 447 |
+
},
|
| 448 |
+
{
|
| 449 |
+
"cell_type": "code",
|
| 450 |
+
"execution_count": null,
|
| 451 |
+
"metadata": {},
|
| 452 |
+
"outputs": [
|
| 453 |
+
{
|
| 454 |
+
"data": {
|
| 455 |
+
"text/plain": [
|
| 456 |
+
"{'Benign': 0.8787491321563721, 'Malignant': 0.12125089019536972}"
|
| 457 |
+
]
|
| 458 |
+
},
|
| 459 |
+
"execution_count": 8,
|
| 460 |
+
"metadata": {},
|
| 461 |
+
"output_type": "execute_result"
|
| 462 |
+
}
|
| 463 |
+
],
|
| 464 |
+
"source": [
|
| 465 |
+
"classify_image(im)"
|
| 466 |
+
]
|
| 467 |
+
},
|
| 468 |
+
{
|
| 469 |
+
"cell_type": "code",
|
| 470 |
+
"execution_count": null,
|
| 471 |
+
"metadata": {},
|
| 472 |
+
"outputs": [
|
| 473 |
+
{
|
| 474 |
+
"name": "stderr",
|
| 475 |
+
"output_type": "stream",
|
| 476 |
+
"text": [
|
| 477 |
+
"c:\\Users\\ntram\\Anaconda3\\lib\\site-packages\\gradio\\inputs.py:259: UserWarning: Usage of gradio.inputs is deprecated, and will not be supported in the future, please import your component from gradio.components\n",
|
| 478 |
+
" warnings.warn(\n",
|
| 479 |
+
"c:\\Users\\ntram\\Anaconda3\\lib\\site-packages\\gradio\\inputs.py:262: UserWarning: `optional` parameter is deprecated, and it has no effect\n",
|
| 480 |
+
" super().__init__(\n",
|
| 481 |
+
"c:\\Users\\ntram\\Anaconda3\\lib\\site-packages\\gradio\\outputs.py:197: UserWarning: Usage of gradio.outputs is deprecated, and will not be supported in the future, please import your components from gradio.components\n",
|
| 482 |
+
" warnings.warn(\n",
|
| 483 |
+
"c:\\Users\\ntram\\Anaconda3\\lib\\site-packages\\gradio\\outputs.py:200: UserWarning: The 'type' parameter has been deprecated. Use the Number component instead.\n",
|
| 484 |
+
" super().__init__(num_top_classes=num_top_classes, type=type, label=label)\n"
|
| 485 |
+
]
|
| 486 |
+
},
|
| 487 |
+
{
|
| 488 |
+
"name": "stdout",
|
| 489 |
+
"output_type": "stream",
|
| 490 |
+
"text": [
|
| 491 |
+
"Running on local URL: http://127.0.0.1:7860\n",
|
| 492 |
+
"\n",
|
| 493 |
+
"To create a public link, set `share=True` in `launch()`.\n"
|
| 494 |
+
]
|
| 495 |
+
},
|
| 496 |
+
{
|
| 497 |
+
"data": {
|
| 498 |
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"text/plain": []
|
| 499 |
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},
|
| 500 |
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|
| 501 |
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|
| 502 |
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"output_type": "execute_result"
|
| 503 |
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| 504 |
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|
| 505 |
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| 506 |
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"text/html": [
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| 507 |
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| 508 |
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"<style>\n",
|
| 509 |
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| 510 |
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" progress {\n",
|
| 511 |
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" /* gets rid of default border in Firefox and Opera. */\n",
|
| 512 |
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" border: none;\n",
|
| 513 |
+
" /* Needs to be in here for Safari polyfill so background images work as expected. */\n",
|
| 514 |
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" background-size: auto;\n",
|
| 515 |
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" }\n",
|
| 516 |
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" progress:not([value]), progress:not([value])::-webkit-progress-bar {\n",
|
| 517 |
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" background: repeating-linear-gradient(45deg, #7e7e7e, #7e7e7e 10px, #5c5c5c 10px, #5c5c5c 20px);\n",
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| 518 |
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" }\n",
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| 519 |
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" .progress-bar-interrupted, .progress-bar-interrupted::-webkit-progress-bar {\n",
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| 520 |
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" background: #F44336;\n",
|
| 521 |
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" }\n",
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| 522 |
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"</style>\n"
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| 523 |
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| 524 |
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| 525 |
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| 530 |
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| 531 |
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|
| 532 |
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| 533 |
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"text/html": [
|
| 534 |
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"\n",
|
| 535 |
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"<style>\n",
|
| 536 |
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" /* Turns off some styling */\n",
|
| 537 |
+
" progress {\n",
|
| 538 |
+
" /* gets rid of default border in Firefox and Opera. */\n",
|
| 539 |
+
" border: none;\n",
|
| 540 |
+
" /* Needs to be in here for Safari polyfill so background images work as expected. */\n",
|
| 541 |
+
" background-size: auto;\n",
|
| 542 |
+
" }\n",
|
| 543 |
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" progress:not([value]), progress:not([value])::-webkit-progress-bar {\n",
|
| 544 |
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" background: repeating-linear-gradient(45deg, #7e7e7e, #7e7e7e 10px, #5c5c5c 10px, #5c5c5c 20px);\n",
|
| 545 |
+
" }\n",
|
| 546 |
+
" .progress-bar-interrupted, .progress-bar-interrupted::-webkit-progress-bar {\n",
|
| 547 |
+
" background: #F44336;\n",
|
| 548 |
+
" }\n",
|
| 549 |
+
"</style>\n"
|
| 550 |
+
],
|
| 551 |
+
"text/plain": [
|
| 552 |
+
"<IPython.core.display.HTML object>"
|
| 553 |
+
]
|
| 554 |
+
},
|
| 555 |
+
"metadata": {},
|
| 556 |
+
"output_type": "display_data"
|
| 557 |
+
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|
| 558 |
+
{
|
| 559 |
+
"data": {
|
| 560 |
+
"text/html": [
|
| 561 |
+
"\n",
|
| 562 |
+
"<style>\n",
|
| 563 |
+
" /* Turns off some styling */\n",
|
| 564 |
+
" progress {\n",
|
| 565 |
+
" /* gets rid of default border in Firefox and Opera. */\n",
|
| 566 |
+
" border: none;\n",
|
| 567 |
+
" /* Needs to be in here for Safari polyfill so background images work as expected. */\n",
|
| 568 |
+
" background-size: auto;\n",
|
| 569 |
+
" }\n",
|
| 570 |
+
" progress:not([value]), progress:not([value])::-webkit-progress-bar {\n",
|
| 571 |
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" background: repeating-linear-gradient(45deg, #7e7e7e, #7e7e7e 10px, #5c5c5c 10px, #5c5c5c 20px);\n",
|
| 572 |
+
" }\n",
|
| 573 |
+
" .progress-bar-interrupted, .progress-bar-interrupted::-webkit-progress-bar {\n",
|
| 574 |
+
" background: #F44336;\n",
|
| 575 |
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" }\n",
|
| 576 |
+
"</style>\n"
|
| 577 |
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],
|
| 578 |
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"text/plain": [
|
| 579 |
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"<IPython.core.display.HTML object>"
|
| 580 |
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|
| 581 |
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| 582 |
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|
| 583 |
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"output_type": "display_data"
|
| 584 |
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|
| 585 |
+
{
|
| 586 |
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"data": {
|
| 587 |
+
"text/html": [
|
| 588 |
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"\n",
|
| 589 |
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" <div>\n",
|
| 590 |
+
" <progress value='0' class='' max='1' style='width:300px; height:20px; vertical-align: middle;'></progress>\n",
|
| 591 |
+
" \n",
|
| 592 |
+
" </div>\n",
|
| 593 |
+
" "
|
| 594 |
+
],
|
| 595 |
+
"text/plain": [
|
| 596 |
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"<IPython.core.display.HTML object>"
|
| 597 |
+
]
|
| 598 |
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},
|
| 599 |
+
"metadata": {},
|
| 600 |
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"output_type": "display_data"
|
| 601 |
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},
|
| 602 |
+
{
|
| 603 |
+
"data": {
|
| 604 |
+
"text/html": [
|
| 605 |
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"\n",
|
| 606 |
+
"<style>\n",
|
| 607 |
+
" /* Turns off some styling */\n",
|
| 608 |
+
" progress {\n",
|
| 609 |
+
" /* gets rid of default border in Firefox and Opera. */\n",
|
| 610 |
+
" border: none;\n",
|
| 611 |
+
" /* Needs to be in here for Safari polyfill so background images work as expected. */\n",
|
| 612 |
+
" background-size: auto;\n",
|
| 613 |
+
" }\n",
|
| 614 |
+
" progress:not([value]), progress:not([value])::-webkit-progress-bar {\n",
|
| 615 |
+
" background: repeating-linear-gradient(45deg, #7e7e7e, #7e7e7e 10px, #5c5c5c 10px, #5c5c5c 20px);\n",
|
| 616 |
+
" }\n",
|
| 617 |
+
" .progress-bar-interrupted, .progress-bar-interrupted::-webkit-progress-bar {\n",
|
| 618 |
+
" background: #F44336;\n",
|
| 619 |
+
" }\n",
|
| 620 |
+
"</style>\n"
|
| 621 |
+
],
|
| 622 |
+
"text/plain": [
|
| 623 |
+
"<IPython.core.display.HTML object>"
|
| 624 |
+
]
|
| 625 |
+
},
|
| 626 |
+
"metadata": {},
|
| 627 |
+
"output_type": "display_data"
|
| 628 |
+
},
|
| 629 |
+
{
|
| 630 |
+
"data": {
|
| 631 |
+
"text/html": [
|
| 632 |
+
"\n",
|
| 633 |
+
" <div>\n",
|
| 634 |
+
" <progress value='0' class='' max='1' style='width:300px; height:20px; vertical-align: middle;'></progress>\n",
|
| 635 |
+
" \n",
|
| 636 |
+
" </div>\n",
|
| 637 |
+
" "
|
| 638 |
+
],
|
| 639 |
+
"text/plain": [
|
| 640 |
+
"<IPython.core.display.HTML object>"
|
| 641 |
+
]
|
| 642 |
+
},
|
| 643 |
+
"metadata": {},
|
| 644 |
+
"output_type": "display_data"
|
| 645 |
+
}
|
| 646 |
+
],
|
| 647 |
+
"source": [
|
| 648 |
+
"image = gr.inputs.Image(shape=(192,192))\n",
|
| 649 |
+
"label = gr.outputs.Label()\n",
|
| 650 |
+
"examples = ['Benign1.jpg','Benign2.jpg','Benign3.jpg', 'Malignant1.jpg', 'Malignant2.jpg', 'Malignant3.jpg']\n",
|
| 651 |
+
"\n",
|
| 652 |
+
"intf = gr.Interface(fn=classify_image, inputs=image, outputs=label, examples=examples)\n",
|
| 653 |
+
"intf.launch(inline=False)"
|
| 654 |
+
]
|
| 655 |
+
},
|
| 656 |
+
{
|
| 657 |
+
"cell_type": "code",
|
| 658 |
+
"execution_count": null,
|
| 659 |
+
"metadata": {},
|
| 660 |
+
"outputs": [],
|
| 661 |
+
"source": []
|
| 662 |
+
}
|
| 663 |
+
],
|
| 664 |
+
"metadata": {
|
| 665 |
+
"kernelspec": {
|
| 666 |
+
"display_name": "base",
|
| 667 |
+
"language": "python",
|
| 668 |
+
"name": "python3"
|
| 669 |
+
},
|
| 670 |
+
"language_info": {
|
| 671 |
+
"codemirror_mode": {
|
| 672 |
+
"name": "ipython",
|
| 673 |
+
"version": 3
|
| 674 |
+
},
|
| 675 |
+
"file_extension": ".py",
|
| 676 |
+
"mimetype": "text/x-python",
|
| 677 |
+
"name": "python",
|
| 678 |
+
"nbconvert_exporter": "python",
|
| 679 |
+
"pygments_lexer": "ipython3",
|
| 680 |
+
"version": "3.7.6"
|
| 681 |
+
},
|
| 682 |
+
"orig_nbformat": 4
|
| 683 |
+
},
|
| 684 |
+
"nbformat": 4,
|
| 685 |
+
"nbformat_minor": 2
|
| 686 |
+
}
|
app.py
ADDED
|
@@ -0,0 +1,19 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
from fastai.vision.all import *
|
| 2 |
+
import gradio as gr
|
| 3 |
+
learn = load_learner('export.pkl')
|
| 4 |
+
|
| 5 |
+
categories = ('Benign', 'Malignant')
|
| 6 |
+
|
| 7 |
+
|
| 8 |
+
def classify_image(img):
|
| 9 |
+
pred,idx,probs = learn.predict(img)
|
| 10 |
+
return dict(zip(categories, map(float,probs)))
|
| 11 |
+
|
| 12 |
+
image = gr.inputs.Image(shape=(192,192))
|
| 13 |
+
label = gr.outputs.Label()
|
| 14 |
+
examples = ['Benign 1.jpg','Benign 2.jpg','Benign 3.jpg', 'Malignant 1.jpg',
|
| 15 |
+
'Malignant 2.jpg', 'Malignant 3.jpg']
|
| 16 |
+
|
| 17 |
+
intf = gr.Interface(fn=classify_image, inputs=image, outputs=label, examples=examples)
|
| 18 |
+
intf.launch(inline=False)
|
| 19 |
+
|
export.pkl
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c37c0fa197275edbce8064b4e237dfaf1578b00782a22dcd8f1e352ecee96f9f
|
| 3 |
+
size 64637257
|
requirements.txt
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
fastai
|
| 2 |
+
timm
|