fix: separate manuscript extraction from scoring; run-button only scoring

app.py

@@ -2807,10 +2807,10 @@ def analyze_manuscript_and_refresh(
 
 def analyze_manuscript_for_dashboard(file_obj, active_path: str):
     """
-    Minimal dashboard-facing manuscript pipeline:
+    Dashboard manuscript pipeline (Draft Mode / ORDER_91):
     - accepts a manuscript upload directly on Dashboard
-    - runs Codex extraction
-    - refreshes workbook dashboard state
+    - runs Codex extraction only
+    - does NOT trigger scoring refresh (TOTEM scoring is run-button only)
     """
     file_path = _extract_uploaded_path(file_obj)
     if not file_path:
@@ -2820,16 +2820,17 @@ def analyze_manuscript_for_dashboard(file_obj, active_path: str):
     author_name = stem.replace("_", " ")[:120]
     works_sampled = stem.replace("_", " ")[:180]
     author_id = "CA-XXX"
-    report, json_out, status, dashboard_html, log_df, summary = analyze_manuscript_and_refresh(
+    report, json_out, status = run_codex_extraction(
         file_obj=file_obj,
         author_name=author_name,
         author_id=author_id,
         works_sampled=works_sampled,
-        active_path=active_path,
     )
-    # Keep dashboard status compact while preserving full report in dedicated output.
-    dashboard_status = f"{status} | Workbook refresh: {summary}"
-    return report, json_out, dashboard_status, dashboard_html, log_df, summary
+    dashboard_status = (
+        f"{status} | Draft Mode active: extraction complete. "
+        "No auto-scoring was run. Click 'Run TOTEM Analysis' to score."
+    )
+    return report, json_out, dashboard_status
 
 
 def recalc_log(log_df, active_path: str):
@@ -2880,6 +2881,14 @@ with gr.Blocks(title="TOTEM Studio") as demo:
         # ── TAB 1: DASHBOARD ─────────────────────────────────────────────────
         with gr.TabItem("Dashboard"):
             dashboard = gr.HTML(value=initial_dashboard_html())
+            gr.HTML(
+                "<div style='max-width:1180px;margin:10px auto 12px auto;padding:10px 14px;"
+                "border:1px solid rgba(242,193,78,.35);border-radius:10px;"
+                "background:rgba(10,22,45,.85);color:#f6f1e8;font-size:13px;'>"
+                "<b>Mode:</b> Draft Mode (ORDER_91) keeps manuscript extraction separate from scoring. "
+                "Only <b>Run TOTEM Analysis</b> updates the 5 scoring metrics."
+                "</div>"
+            )
 
             with gr.Row(elem_id="studio-actions"):
                 with gr.Column(elem_classes=["wrap"]):
@@ -2918,7 +2927,7 @@ with gr.Blocks(title="TOTEM Studio") as demo:
                         type="filepath",
                     )
                     dashboard_manuscript_analyze = gr.Button(
-                        "Analyze Manuscript + Refresh Dashboard",
+                        "Analyze Manuscript (No Auto-Score)",
                         variant="primary",
                     )
                     dashboard_manuscript_status = gr.Textbox(
@@ -3108,9 +3117,6 @@ with gr.Blocks(title="TOTEM Studio") as demo:
             dashboard_manuscript_report,
             dashboard_manuscript_json,
             dashboard_manuscript_status,
-            dashboard,
-            log_state,
-            score_status,
         ],
     )
     recalc_button.click(recalc_log, inputs=[log_state, active_path],